RNA–Protein interactions for RNA: ENST00000635905.1

CLN5-205, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-205ENST00000635905 DNAJC25Q9H1X3 360 aa22.72■■□□□ 1.23
CLN5-205ENST00000635905 NECTIN1Q15223 517 aa22.72■■□□□ 1.23
CLN5-205ENST00000635905 SPATA32Q96LK8 384 aa22.72■■□□□ 1.23
CLN5-205ENST00000635905 USP31Q70CQ4 1352 aa22.72■■□□□ 1.23
CLN5-205ENST00000635905 TTC21AQ8NDW8 1320 aa22.72■■□□□ 1.23
CLN5-205ENST00000635905 RBM8AQ9Y5S9 174 aaKnown RBP22.72■■□□□ 1.23
CLN5-205ENST00000635905 EIF2S2P20042 333 aaKnown RBP22.71■■□□□ 1.23
CLN5-205ENST00000635905 KCNJ4P48050 445 aa22.71■■□□□ 1.23
CLN5-205ENST00000635905 SYCP1Q15431 976 aa22.71■■□□□ 1.23
CLN5-205ENST00000635905 CLIP2Q9UDT6 1046 aa22.71■■□□□ 1.23
CLN5-205ENST00000635905 ZKSCAN1P17029 563 aaPredicted RBP22.71■■□□□ 1.23
CLN5-205ENST00000635905 AMPHP49418 695 aa22.71■■□□□ 1.23
CLN5-205ENST00000635905 ZNF165P49910 485 aa22.71■■□□□ 1.23
CLN5-205ENST00000635905 CREB3L3Q68CJ9 461 aa22.71■■□□□ 1.23
CLN5-205ENST00000635905 TDRD7Q8NHU6 1098 aaKnown RBP22.71■■□□□ 1.23
CLN5-205ENST00000635905 USP6P35125 1406 aa22.7■■□□□ 1.23
CLN5-205ENST00000635905 IGSF1Q8N6C5 1336 aa22.7■■□□□ 1.22
CLN5-205ENST00000635905 NR1I2O75469 434 aa22.7■■□□□ 1.22
CLN5-205ENST00000635905 KCNB2Q92953 911 aa22.7■■□□□ 1.22
CLN5-205ENST00000635905 CCDC171Q6TFL3 1326 aa22.7■■□□□ 1.22
CLN5-205ENST00000635905 PXDNLA1KZ92 1463 aa22.7■■□□□ 1.22
CLN5-205ENST00000635905 SIRT1Q96EB6 747 aa22.7■■□□□ 1.22
CLN5-205ENST00000635905 CLSTN2Q9H4D0 955 aa22.7■■□□□ 1.22
CLN5-205ENST00000635905 DDX41Q9UJV9 622 aaKnown RBP22.7■■□□□ 1.22
CLN5-205ENST00000635905 TTC41PQ6P2S7 1318 aa22.69■■□□□ 1.22
CLN5-205ENST00000635905 TAF7Q15545 349 aaPredicted RBP22.69■■□□□ 1.22
CLN5-205ENST00000635905 LARP1Q6PKG0 1096 aaKnown RBP22.69■■□□□ 1.22
CLN5-205ENST00000635905 LEO1Q8WVC0 666 aaPredicted RBP22.69■■□□□ 1.22
CLN5-205ENST00000635905 CGNQ9P2M7 1197 aaKnown RBP22.69■■□□□ 1.22
CLN5-205ENST00000635905 USP42Q9H9J4 1324 aaKnown RBP22.69■■□□□ 1.22
CLN5-205ENST00000635905 LTV1Q96GA3 475 aaPredicted RBP22.69■■□□□ 1.22
CLN5-205ENST00000635905 FAM227BQ96M60 508 aa22.69■■□□□ 1.22
CLN5-205ENST00000635905 DDX19AQ9NUU7 478 aaKnown RBP22.69■■□□□ 1.22
CLN5-205ENST00000635905 PAXBP1Q9Y5B6 917 aa22.69■■□□□ 1.22
CLN5-205ENST00000635905 FLT4P35916 1363 aa22.69■■□□□ 1.22
CLN5-205ENST00000635905 ARID5BQ14865 1188 aa22.68■■□□□ 1.22
CLN5-205ENST00000635905 SCAND2PQ9GZW5 306 aaPredicted RBP22.68■■□□□ 1.22
CLN5-205ENST00000635905 NPHP3Q7Z494 1330 aa22.68■■□□□ 1.22
CLN5-205ENST00000635905 HTATSF1O43719 755 aaKnown RBP22.67■■□□□ 1.22
CLN5-205ENST00000635905 STK3Q13188 491 aa22.67■■□□□ 1.22
CLN5-205ENST00000635905 RBM43Q6ZSC3 357 aaKnown RBP22.67■■□□□ 1.22
CLN5-205ENST00000635905 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.67■■□□□ 1.22
CLN5-205ENST00000635905 CLASRPQ8N2M8 674 aaKnown RBP22.67■■□□□ 1.22
CLN5-205ENST00000635905 BICD2Q8TD16 824 aa22.67■■□□□ 1.22
CLN5-205ENST00000635905 ECHDC1Q9NTX5 307 aa22.67■■□□□ 1.22
CLN5-205ENST00000635905 TAF6LQ9Y6J9 622 aa22.67■■□□□ 1.22
CLN5-205ENST00000635905 PLEKHG3A1L390 1219 aa22.67■■□□□ 1.22
CLN5-205ENST00000635905 USP27XA6NNY8 438 aa22.67■■□□□ 1.22
CLN5-205ENST00000635905 CEP135Q66GS9 1140 aa22.67■■□□□ 1.22
CLN5-205ENST00000635905 PGBD1Q96JS3 809 aa22.67■■□□□ 1.22
CLN5-205ENST00000635905 PI4KAP2A4QPH2 592 aa22.67■■□□□ 1.22
CLN5-205ENST00000635905 PDCP20941 246 aa22.67■■□□□ 1.22
CLN5-205ENST00000635905 HSP90AB4PQ58FF6 505 aa22.67■■□□□ 1.22
CLN5-205ENST00000635905 PI4KAP1Q8N8J0 262 aa22.67■■□□□ 1.22
CLN5-205ENST00000635905 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.67■■□□□ 1.22
CLN5-205ENST00000635905 V9GYY5 206 aaPredicted RBP22.67■■□□□ 1.22
CLN5-205ENST00000635905 SBNO1A3KN83 1393 aa22.66■■□□□ 1.22
CLN5-205ENST00000635905 ANXA1P04083 346 aa22.66■■□□□ 1.22
CLN5-205ENST00000635905 PA2G4Q9UQ80 394 aaKnown RBP22.66■■□□□ 1.22
CLN5-205ENST00000635905 BEND3Q5T5X7 828 aa22.66■■□□□ 1.22
CLN5-205ENST00000635905 ARHGAP23Q9P227 1491 aa22.65■■□□□ 1.22
CLN5-205ENST00000635905 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.65■■□□□ 1.22
CLN5-205ENST00000635905 SLC27A2O14975 620 aa22.65■■□□□ 1.22
CLN5-205ENST00000635905 KIF18AQ8NI77 898 aa22.65■■□□□ 1.22
CLN5-205ENST00000635905 NLRP6P59044 892 aa22.64■■□□□ 1.22
CLN5-205ENST00000635905 NMIQ13287 307 aaPredicted RBP22.64■■□□□ 1.22
CLN5-205ENST00000635905 DNAAF4Q8WXU2 420 aa22.64■■□□□ 1.22
CLN5-205ENST00000635905 IFIT2P09913 472 aaKnown RBP22.64■■□□□ 1.21
CLN5-205ENST00000635905 GABPB1Q06547 395 aaPredicted RBP22.64■■□□□ 1.21
CLN5-205ENST00000635905 MAP4K1Q92918 833 aa22.64■■□□□ 1.21
CLN5-205ENST00000635905 CHPF2Q9P2E5 772 aa22.64■■□□□ 1.21
CLN5-205ENST00000635905 SLFN14P0C7P3 912 aa22.63■■□□□ 1.21
CLN5-205ENST00000635905 ZNF215Q9UL58 517 aaPredicted RBP22.63■■□□□ 1.21
CLN5-205ENST00000635905 MORC2Q9Y6X9 1032 aaPredicted RBP22.63■■□□□ 1.21
CLN5-205ENST00000635905 SLIT1O75093 1534 aa22.63■■□□□ 1.21
CLN5-205ENST00000635905 BLOC1S2Q6QNY1 142 aa22.63■■□□□ 1.21
CLN5-205ENST00000635905 LRRC8AQ8IWT6 810 aa22.63■■□□□ 1.21
CLN5-205ENST00000635905 EVI5LQ96CN4 794 aa22.63■■□□□ 1.21
CLN5-205ENST00000635905 ANKLE2Q86XL3 938 aa22.62■■□□□ 1.21
CLN5-205ENST00000635905 CRYBG1Q9Y4K1 1723 aa22.62■■□□□ 1.21
CLN5-205ENST00000635905 TOB2Q14106 344 aaPredicted RBP22.62■■□□□ 1.21
CLN5-205ENST00000635905 KMT5BQ4FZB7 885 aa22.62■■□□□ 1.21
CLN5-205ENST00000635905 DDX11Q96FC9 970 aa22.62■■□□□ 1.21
CLN5-205ENST00000635905 PSMA5P28066 241 aa22.61■■□□□ 1.21
CLN5-205ENST00000635905 AACSQ86V21 672 aa22.61■■□□□ 1.21
CLN5-205ENST00000635905 NALCNQ8IZF0 1738 aa22.61■■□□□ 1.21
CLN5-205ENST00000635905 JAK2O60674 1132 aa22.61■■□□□ 1.21
CLN5-205ENST00000635905 C11orf57Q6ZUT1 292 aaPredicted RBP22.61■■□□□ 1.21
CLN5-205ENST00000635905 USHBP1Q8N6Y0 703 aa22.61■■□□□ 1.21
CLN5-205ENST00000635905 SETD1BQ9UPS6 1966 aaKnown RBP22.61■■□□□ 1.21
CLN5-205ENST00000635905 GPATCH3Q96I76 525 aa22.61■■□□□ 1.21
CLN5-205ENST00000635905 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.61■■□□□ 1.21
CLN5-205ENST00000635905 A0A0D9SFI3 127 aa22.6■■□□□ 1.21
CLN5-205ENST00000635905 TRMT1Q9NXH9 659 aaKnown RBP22.6■■□□□ 1.21
CLN5-205ENST00000635905 LRRC37A3O60309 1634 aa22.6■■□□□ 1.21
CLN5-205ENST00000635905 A0A087WWV3 80 aa22.6■■□□□ 1.21
CLN5-205ENST00000635905 GOLGA6L19H0YKK7 550 aa22.6■■□□□ 1.21
CLN5-205ENST00000635905 RPS6KB1P23443 525 aa22.6■■□□□ 1.21
CLN5-205ENST00000635905 IQCB1Q15051 598 aa22.6■■□□□ 1.21
CLN5-205ENST00000635905 PDIA4P13667 645 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms