RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 ANKLE1Q8NAG6 615 aa10.34□□□□□ -0.75
SMARCA2-244ENST00000635659 EHBP1Q8NDI1 1231 aa10.34□□□□□ -0.75
SMARCA2-244ENST00000635659 FAM129BQ96TA1 746 aa10.34□□□□□ -0.75
SMARCA2-244ENST00000635659 ZNF142P52746 1687 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-244ENST00000635659 RTEL1-TNFRSF6BF6WH68 1400 aa10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 A6NJY4 79 aa10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 PRPF40AO75400 957 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 IGHA2P01877 340 aa10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 ITGAEP38570 1179 aa10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 HNRNPMP52272 730 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 PSMA6P60900 246 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 MLECQ14165 292 aa10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 ARID5BQ14865 1188 aa10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 COX20Q5RI15 118 aa10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 ABTB2Q8N961 1025 aa10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 TMC1Q8TDI8 760 aa10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 STRCQ7RTU9 1775 aa10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 MYO3AQ8NEV4 1616 aa10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 RNF17Q9BXT8 1623 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 MYOM3Q5VTT5 1437 aa10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 SPAG9O60271 1321 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-244ENST00000635659 RNF223E7ERA6 249 aa10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 LILRA1O75019 489 aa10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 GRM5P41594 1212 aa10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 SMTNP53814 917 aa10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 MYT1Q01538 1121 aa10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 PLCB3Q01970 1234 aa10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 EHHADHQ08426 723 aa10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 PDE3BQ13370 1112 aa10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 NAALADL2Q58DX5 795 aa10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 PLA2G2CQ5R387 149 aa10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 ALKBH8Q96BT7 664 aaKnown RBP10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 MYO19Q96H55 970 aa10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 CCDC87Q9NVE4 849 aa10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 PTPN23Q9H3S7 1636 aa10.32□□□□□ -0.76
SMARCA2-244ENST00000635659 LDHBP07195 334 aaKnown RBP10.31□□□□□ -0.76
SMARCA2-244ENST00000635659 ERCC5P28715 1186 aaPredicted RBP10.31□□□□□ -0.76
SMARCA2-244ENST00000635659 RPIAP49247 311 aa10.31□□□□□ -0.76
SMARCA2-244ENST00000635659 XPCQ01831 940 aaPredicted RBP10.31□□□□□ -0.76
SMARCA2-244ENST00000635659 POTEAQ6S8J7 498 aa10.31□□□□□ -0.76
SMARCA2-244ENST00000635659 CCDC116Q8IYX3 515 aa10.31□□□□□ -0.76
SMARCA2-244ENST00000635659 QTRT2Q9H974 415 aaKnown RBP10.31□□□□□ -0.76
SMARCA2-244ENST00000635659 EIF2AK4Q9P2K8 1649 aaKnown RBP10.31□□□□□ -0.76
SMARCA2-244ENST00000635659 FAM135AQ9P2D6 1515 aa10.31□□□□□ -0.76
SMARCA2-244ENST00000635659 MIA2Q96PC5 1412 aa10.31□□□□□ -0.76
SMARCA2-244ENST00000635659 CNTLNQ9NXG0 1405 aa10.31□□□□□ -0.76
SMARCA2-244ENST00000635659 DNMT1P26358 1616 aaKnown RBP10.3□□□□□ -0.76
SMARCA2-244ENST00000635659 MROH1Q8NDA8 1641 aa10.3□□□□□ -0.76
SMARCA2-244ENST00000635659 MAPK8P45983 427 aa10.3□□□□□ -0.76
SMARCA2-244ENST00000635659 HDLBPQ00341 1268 aaKnown RBP10.3□□□□□ -0.76
SMARCA2-244ENST00000635659 AAMPQ13685 434 aa10.3□□□□□ -0.76
SMARCA2-244ENST00000635659 SF3A1Q15459 793 aaKnown RBP10.3□□□□□ -0.76
SMARCA2-244ENST00000635659 TBCELQ5QJ74 424 aa10.3□□□□□ -0.76
SMARCA2-244ENST00000635659 CHMP3Q9Y3E7 222 aa10.3□□□□□ -0.76
SMARCA2-244ENST00000635659 ZC3H13Q5T200 1668 aaKnown RBP10.29□□□□□ -0.76
SMARCA2-244ENST00000635659 GPR182O15218 404 aa10.29□□□□□ -0.76
SMARCA2-244ENST00000635659 LDLRAD1Q5T700 205 aa10.29□□□□□ -0.76
SMARCA2-244ENST00000635659 PPP1R26Q5T8A7 1209 aaPredicted RBP10.29□□□□□ -0.76
SMARCA2-244ENST00000635659 TMC4Q7Z404 712 aa10.29□□□□□ -0.76
SMARCA2-244ENST00000635659 PARP2Q9UGN5 583 aa10.29□□□□□ -0.76
SMARCA2-244ENST00000635659 SHANK2Q9UPX8 1470 aa10.29□□□□□ -0.76
SMARCA2-244ENST00000635659 ADH1CP00326 375 aa10.28□□□□□ -0.76
SMARCA2-244ENST00000635659 GGCXP38435 758 aa10.28□□□□□ -0.76
SMARCA2-244ENST00000635659 RC3H1Q5TC82 1133 aaKnown RBP10.28□□□□□ -0.76
SMARCA2-244ENST00000635659 XAGE2Q96GT9 111 aa10.28□□□□□ -0.76
SMARCA2-244ENST00000635659 DUSP9Q99956 384 aaKnown RBP10.28□□□□□ -0.76
SMARCA2-244ENST00000635659 MRS2Q9HD23 443 aa10.28□□□□□ -0.76
SMARCA2-244ENST00000635659 LRFN2Q9ULH4 789 aa10.28□□□□□ -0.76
SMARCA2-244ENST00000635659 TLL2Q9Y6L7 1015 aa10.28□□□□□ -0.76
SMARCA2-244ENST00000635659 TCOF1Q13428 1488 aaKnown RBP10.28□□□□□ -0.76
SMARCA2-244ENST00000635659 KDM5DQ9BY66 1539 aa10.28□□□□□ -0.76
SMARCA2-244ENST00000635659 CDK2AP1O14519 115 aa10.27□□□□□ -0.77
SMARCA2-244ENST00000635659 ATP2B2Q01814 1243 aa10.27□□□□□ -0.77
SMARCA2-244ENST00000635659 NR5A1Q13285 461 aa10.27□□□□□ -0.77
SMARCA2-244ENST00000635659 CEP152O94986 1710 aa10.27□□□□□ -0.77
SMARCA2-244ENST00000635659 DEPDC5O75140 1603 aa10.26□□□□□ -0.77
SMARCA2-244ENST00000635659 NPATQ14207 1427 aa10.26□□□□□ -0.77
SMARCA2-244ENST00000635659 UHRF1BP1Q6BDS2 1440 aa10.26□□□□□ -0.77
SMARCA2-244ENST00000635659 BRD2P25440 801 aaKnown RBP10.26□□□□□ -0.77
SMARCA2-244ENST00000635659 CEBPAP49715 358 aaPredicted RBP10.26□□□□□ -0.77
SMARCA2-244ENST00000635659 HIRAP54198 1017 aaPredicted RBP10.26□□□□□ -0.77
SMARCA2-244ENST00000635659 DAB2P98082 770 aa10.26□□□□□ -0.77
SMARCA2-244ENST00000635659 NBPF15Q8N660 670 aa10.26□□□□□ -0.77
SMARCA2-244ENST00000635659 UBXN4Q92575 508 aa10.26□□□□□ -0.77
SMARCA2-244ENST00000635659 ARHGEF10LQ9HCE6 1279 aa10.26□□□□□ -0.77
SMARCA2-244ENST00000635659 RAB6BQ9NRW1 208 aa10.26□□□□□ -0.77
SMARCA2-244ENST00000635659 IQSEC3Q9UPP2 1182 aaPredicted RBP10.26□□□□□ -0.77
SMARCA2-244ENST00000635659 DHX29Q7Z478 1369 aaKnown RBP10.26□□□□□ -0.77
SMARCA2-244ENST00000635659 FGD6Q6ZV73 1430 aa10.25□□□□□ -0.77
SMARCA2-244ENST00000635659 SORBS3O60504 671 aa10.25□□□□□ -0.77
SMARCA2-244ENST00000635659 IL2RAP01589 272 aa10.25□□□□□ -0.77
SMARCA2-244ENST00000635659 ADD1P35611 737 aaKnown RBP10.25□□□□□ -0.77
SMARCA2-244ENST00000635659 KCNC4Q03721 635 aa10.25□□□□□ -0.77
SMARCA2-244ENST00000635659 GJD3Q8N144 294 aa10.25□□□□□ -0.77
SMARCA2-244ENST00000635659 FAM161BQ96MY7 647 aa10.25□□□□□ -0.77
SMARCA2-244ENST00000635659 METTL5Q9NRN9 209 aaKnown RBP10.25□□□□□ -0.77
SMARCA2-244ENST00000635659 PGPEP1Q9NXJ5 209 aa10.25□□□□□ -0.77
SMARCA2-244ENST00000635659 CEP170BQ9Y4F5 1589 aaPredicted RBP10.25□□□□□ -0.77
SMARCA2-244ENST00000635659 PTPRKQ15262 1439 aa10.24□□□□□ -0.77
SMARCA2-244ENST00000635659 PRDM15P57071 1507 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms