RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 METAP2P50579 478 aaKnown RBP eCLIP24.28■■□□□ 1.48
SMARCA2-227ENST00000634760 ALS2CR12Q96Q35 445 aa24.28■■□□□ 1.48
SMARCA2-227ENST00000634760 NUP88Q99567 741 aaPredicted RBP24.28■■□□□ 1.48
SMARCA2-227ENST00000634760 DMRT2Q9Y5R5 561 aa24.28■■□□□ 1.48
SMARCA2-227ENST00000634760 MPNDQ8N594 471 aa24.27■■□□□ 1.48
SMARCA2-227ENST00000634760 PIP4K2BP78356 416 aa24.27■■□□□ 1.48
SMARCA2-227ENST00000634760 CCDC91Q7Z6B0 441 aa24.27■■□□□ 1.48
SMARCA2-227ENST00000634760 TMTC2Q8N394 836 aa24.27■■□□□ 1.48
SMARCA2-227ENST00000634760 RHPN1Q8TCX5 695 aa24.27■■□□□ 1.48
SMARCA2-227ENST00000634760 KAT14Q9H8E8 782 aa24.27■■□□□ 1.48
SMARCA2-227ENST00000634760 UHRF1BP1LA0JNW5 1464 aa24.27■■□□□ 1.48
SMARCA2-227ENST00000634760 NEBLO76041 1014 aa24.27■■□□□ 1.48
SMARCA2-227ENST00000634760 TAX1BP1Q86VP1 789 aa24.27■■□□□ 1.48
SMARCA2-227ENST00000634760 CNNM2Q9H8M5 875 aa24.27■■□□□ 1.48
SMARCA2-227ENST00000634760 SYCP2Q9BX26 1530 aa24.26■■□□□ 1.47
SMARCA2-227ENST00000634760 SHTN1A0MZ66 631 aa24.26■■□□□ 1.47
SMARCA2-227ENST00000634760 PIK3C2GO75747 1445 aa24.26■■□□□ 1.47
SMARCA2-227ENST00000634760 CETN1Q12798 172 aa24.26■■□□□ 1.47
SMARCA2-227ENST00000634760 KIF4BQ2VIQ3 1234 aa24.26■■□□□ 1.47
SMARCA2-227ENST00000634760 PAFAH1B1P43034 410 aa24.26■■□□□ 1.47
SMARCA2-227ENST00000634760 MRPL50Q8N5N7 158 aaKnown RBP24.26■■□□□ 1.47
SMARCA2-227ENST00000634760 CCDC152Q4G0S7 254 aa24.25■■□□□ 1.47
SMARCA2-227ENST00000634760 KLHL10Q6JEL2 608 aa24.25■■□□□ 1.47
SMARCA2-227ENST00000634760 LDHAL6AQ6ZMR3 332 aa24.25■■□□□ 1.47
SMARCA2-227ENST00000634760 FOXO3O43524 673 aa24.25■■□□□ 1.47
SMARCA2-227ENST00000634760 ANKRD44Q8N8A2 993 aa24.25■■□□□ 1.47
SMARCA2-227ENST00000634760 CRNKL1Q9BZJ0 848 aaKnown RBP24.25■■□□□ 1.47
SMARCA2-227ENST00000634760 PI4KAP2A4QPH2 592 aa24.25■■□□□ 1.47
SMARCA2-227ENST00000634760 ZSCAN22P10073 491 aaPredicted RBP24.25■■□□□ 1.47
SMARCA2-227ENST00000634760 PI4KAP1Q8N8J0 262 aa24.25■■□□□ 1.47
SMARCA2-227ENST00000634760 SNX21Q969T3 373 aa24.25■■□□□ 1.47
SMARCA2-227ENST00000634760 NAA15Q9BXJ9 866 aaKnown RBP24.25■■□□□ 1.47
SMARCA2-227ENST00000634760 IGHDP01880 384 aa24.24■■□□□ 1.47
SMARCA2-227ENST00000634760 AKAP4Q5JQC9 854 aa24.24■■□□□ 1.47
SMARCA2-227ENST00000634760 ZGPATQ8N5A5 531 aaKnown RBP24.24■■□□□ 1.47
SMARCA2-227ENST00000634760 CADPS2Q86UW7 1296 aa24.24■■□□□ 1.47
SMARCA2-227ENST00000634760 TRAF1Q13077 416 aa24.24■■□□□ 1.47
SMARCA2-227ENST00000634760 DDX46Q7L014 1031 aaKnown RBP24.24■■□□□ 1.47
SMARCA2-227ENST00000634760 EHBP1Q8NDI1 1231 aa24.24■■□□□ 1.47
SMARCA2-227ENST00000634760 ORC3Q9UBD5 711 aaPredicted RBP24.24■■□□□ 1.47
SMARCA2-227ENST00000634760 CCT2P78371 535 aaKnown RBP24.23■■□□□ 1.47
SMARCA2-227ENST00000634760 GUCY1B3Q02153 619 aa24.23■■□□□ 1.47
SMARCA2-227ENST00000634760 CCDC102BQ68D86 513 aa24.23■■□□□ 1.47
SMARCA2-227ENST00000634760 RIMS2Q9UQ26 1411 aa24.23■■□□□ 1.47
SMARCA2-227ENST00000634760 ATP10BO94823 1461 aa24.23■■□□□ 1.47
SMARCA2-227ENST00000634760 ATP8B2P98198 1209 aa24.23■■□□□ 1.47
SMARCA2-227ENST00000634760 ANKRD13DQ6ZTN6 518 aa24.23■■□□□ 1.47
SMARCA2-227ENST00000634760 ZBTB3Q9H5J0 574 aa24.23■■□□□ 1.47
SMARCA2-227ENST00000634760 ZNF608Q9ULD9 1512 aaPredicted RBP24.23■■□□□ 1.47
SMARCA2-227ENST00000634760 HLA-DOAP06340 250 aa24.23■■□□□ 1.47
SMARCA2-227ENST00000634760 SSR1P43307 286 aaKnown RBP24.22■■□□□ 1.47
SMARCA2-227ENST00000634760 GCOM1H8Y6P7 765 aaPredicted RBP24.22■■□□□ 1.47
SMARCA2-227ENST00000634760 MYZAPP0CAP1 466 aa24.22■■□□□ 1.47
SMARCA2-227ENST00000634760 TTC41PQ6P2S7 1318 aa24.22■■□□□ 1.47
SMARCA2-227ENST00000634760 URI1O94763 535 aaPredicted RBP24.22■■□□□ 1.47
SMARCA2-227ENST00000634760 TNNT1P13805 278 aa24.22■■□□□ 1.47
SMARCA2-227ENST00000634760 INCENPQ9NQS7 918 aa24.22■■□□□ 1.47
SMARCA2-227ENST00000634760 LUZP1Q86V48 1076 aa24.21■■□□□ 1.47
SMARCA2-227ENST00000634760 KIF21AQ7Z4S6 1674 aa24.21■■□□□ 1.47
SMARCA2-227ENST00000634760 MTIF2P46199 727 aaKnown RBP24.21■■□□□ 1.47
SMARCA2-227ENST00000634760 KCNG4Q8TDN1 519 aa24.21■■□□□ 1.47
SMARCA2-227ENST00000634760 CTAGE1Q96RT6 745 aa24.21■■□□□ 1.47
SMARCA2-227ENST00000634760 KIAA0556O60303 1618 aa24.21■■□□□ 1.47
SMARCA2-227ENST00000634760 LRSAM1Q6UWE0 723 aa24.2■■□□□ 1.47
SMARCA2-227ENST00000634760 TAOK3Q9H2K8 898 aa24.2■■□□□ 1.47
SMARCA2-227ENST00000634760 CKAP2LQ8IYA6 745 aa24.2■■□□□ 1.46
SMARCA2-227ENST00000634760 PAXBP1Q9Y5B6 917 aa24.2■■□□□ 1.46
SMARCA2-227ENST00000634760 WDR7Q9Y4E6 1490 aa24.2■■□□□ 1.46
SMARCA2-227ENST00000634760 CCDC171Q6TFL3 1326 aa24.2■■□□□ 1.46
SMARCA2-227ENST00000634760 UBE3BQ7Z3V4 1068 aa24.2■■□□□ 1.46
SMARCA2-227ENST00000634760 ESYT1Q9BSJ8 1104 aa24.2■■□□□ 1.46
SMARCA2-227ENST00000634760 USP25Q9UHP3 1055 aa24.2■■□□□ 1.46
SMARCA2-227ENST00000634760 NUP153P49790 1475 aaKnown RBP24.2■■□□□ 1.46
SMARCA2-227ENST00000634760 WDHD1O75717 1129 aaPredicted RBP24.2■■□□□ 1.46
SMARCA2-227ENST00000634760 ABCC1P33527 1531 aa24.19■■□□□ 1.46
SMARCA2-227ENST00000634760 ADCY5O95622 1261 aa24.19■■□□□ 1.46
SMARCA2-227ENST00000634760 IFI16Q16666 785 aaKnown RBP24.19■■□□□ 1.46
SMARCA2-227ENST00000634760 MSH6P52701 1360 aa24.19■■□□□ 1.46
SMARCA2-227ENST00000634760 TMC6Q7Z403 805 aa24.19■■□□□ 1.46
SMARCA2-227ENST00000634760 TMX3Q96JJ7 454 aa24.19■■□□□ 1.46
SMARCA2-227ENST00000634760 TSPY2A6NKD2 308 aa24.19■■□□□ 1.46
SMARCA2-227ENST00000634760 SDSP20132 328 aa24.19■■□□□ 1.46
SMARCA2-227ENST00000634760 GTPBP4Q9BZE4 634 aaKnown RBP24.19■■□□□ 1.46
SMARCA2-227ENST00000634760 FAM107BQ9H098 131 aa24.19■■□□□ 1.46
SMARCA2-227ENST00000634760 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.19■■□□□ 1.461e-6■■■■□ 21.7
SMARCA2-227ENST00000634760 ST5P78524 1137 aa24.18■■□□□ 1.46
SMARCA2-227ENST00000634760 TUBB4AP04350 444 aa24.18■■□□□ 1.46
SMARCA2-227ENST00000634760 IL15P40933 162 aaPredicted RBP24.18■■□□□ 1.46
SMARCA2-227ENST00000634760 PDE1AP54750 535 aa24.18■■□□□ 1.46
SMARCA2-227ENST00000634760 KSR2Q6VAB6 950 aa24.18■■□□□ 1.46
SMARCA2-227ENST00000634760 CABP5Q9NP86 173 aa24.18■■□□□ 1.46
SMARCA2-227ENST00000634760 RBM25P49756 843 aaKnown RBP24.18■■□□□ 1.46
SMARCA2-227ENST00000634760 TRPM2O94759 1503 aa24.18■■□□□ 1.46
SMARCA2-227ENST00000634760 MCMDC2Q4G0Z9 681 aa24.18■■□□□ 1.46
SMARCA2-227ENST00000634760 MICALCLQ6ZW33 695 aa24.18■■□□□ 1.46
SMARCA2-227ENST00000634760 UBA5Q9GZZ9 404 aa24.18■■□□□ 1.46
SMARCA2-227ENST00000634760 FAM83GA6ND36 823 aa24.17■■□□□ 1.46
SMARCA2-227ENST00000634760 CCDC172P0C7W6 258 aa24.17■■□□□ 1.46
SMARCA2-227ENST00000634760 GNAQP50148 359 aa24.17■■□□□ 1.46
SMARCA2-227ENST00000634760 WTAPQ15007 396 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms