RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 PRIM1P49642 420 aaKnown RBP17.47■□□□□ 0.39
LIMS4-204ENST00000632897 CASP7P55210 303 aa17.47■□□□□ 0.39
LIMS4-204ENST00000632897 CCDC191Q8NCU4 936 aa17.47■□□□□ 0.39
LIMS4-204ENST00000632897 CICQ96RK0 1608 aaPredicted RBP17.46■□□□□ 0.39
LIMS4-204ENST00000632897 TJP1Q07157 1748 aa17.46■□□□□ 0.39
LIMS4-204ENST00000632897 H7C1W4 665 aa17.46■□□□□ 0.39
LIMS4-204ENST00000632897 G3BP1Q13283 466 aaKnown RBP eCLIP17.46■□□□□ 0.39
LIMS4-204ENST00000632897 KIF6Q6ZMV9 814 aa17.46■□□□□ 0.39
LIMS4-204ENST00000632897 CLASRPQ8N2M8 674 aaKnown RBP17.46■□□□□ 0.39
LIMS4-204ENST00000632897 SRCAPQ6ZRS2 3230 aa17.46■□□□□ 0.39
LIMS4-204ENST00000632897 CYP19A1P11511 503 aaPredicted RBP17.45■□□□□ 0.38
LIMS4-204ENST00000632897 TRIM28Q13263 835 aaKnown RBP17.45■□□□□ 0.38
LIMS4-204ENST00000632897 UBE3BQ7Z3V4 1068 aa17.45■□□□□ 0.38
LIMS4-204ENST00000632897 MARCH10Q8NA82 808 aaPredicted RBP17.45■□□□□ 0.38
LIMS4-204ENST00000632897 SYTL4Q96C24 671 aaPredicted RBP17.45■□□□□ 0.38
LIMS4-204ENST00000632897 TTC41PQ6P2S7 1318 aa17.45■□□□□ 0.38
LIMS4-204ENST00000632897 ISCA1Q9BUE6 129 aa17.44■□□□□ 0.38
LIMS4-204ENST00000632897 BCL11BQ9C0K0 894 aaPredicted RBP17.44■□□□□ 0.38
LIMS4-204ENST00000632897 COPRSQ9NQ92 184 aa17.44■□□□□ 0.38
LIMS4-204ENST00000632897 PLSCR1O15162 318 aa17.44■□□□□ 0.38
LIMS4-204ENST00000632897 TCIRG1Q13488 830 aa17.44■□□□□ 0.38
LIMS4-204ENST00000632897 EPHA10Q5JZY3 1008 aa17.44■□□□□ 0.38
LIMS4-204ENST00000632897 NUTM1Q86Y26 1132 aa17.44■□□□□ 0.38
LIMS4-204ENST00000632897 GPATCH3Q96I76 525 aa17.44■□□□□ 0.38
LIMS4-204ENST00000632897 SLC4A9Q96Q91 983 aa17.44■□□□□ 0.38
LIMS4-204ENST00000632897 ZBTB3Q9H5J0 574 aa17.44■□□□□ 0.38
LIMS4-204ENST00000632897 PA2G4Q9UQ80 394 aaKnown RBP17.44■□□□□ 0.38
LIMS4-204ENST00000632897 REC8O95072 547 aa17.43■□□□□ 0.38
LIMS4-204ENST00000632897 MAP3K15Q6ZN16 1313 aa17.43■□□□□ 0.38
LIMS4-204ENST00000632897 ERC2O15083 957 aa17.42■□□□□ 0.38
LIMS4-204ENST00000632897 RFX5P48382 616 aaPredicted RBP17.42■□□□□ 0.38
LIMS4-204ENST00000632897 HSP90AB3PQ58FF7 597 aa17.42■□□□□ 0.38
LIMS4-204ENST00000632897 TSHZ3Q63HK5 1081 aa17.42■□□□□ 0.38
LIMS4-204ENST00000632897 PI4K2BQ8TCG2 481 aa17.42■□□□□ 0.38
LIMS4-204ENST00000632897 GLRX3O76003 335 aaKnown RBP17.41■□□□□ 0.38
LIMS4-204ENST00000632897 IFIT2P09913 472 aaKnown RBP17.41■□□□□ 0.38
LIMS4-204ENST00000632897 SLC4A3P48751 1232 aa17.41■□□□□ 0.38
LIMS4-204ENST00000632897 SMARCC1Q92922 1105 aaPredicted RBP17.41■□□□□ 0.38
LIMS4-204ENST00000632897 TRIM6-TRIM34B2RNG4 842 aa17.4■□□□□ 0.38
LIMS4-204ENST00000632897 SASH1O94885 1247 aa17.4■□□□□ 0.38
LIMS4-204ENST00000632897 IL6STP40189 918 aaPredicted RBP17.4■□□□□ 0.38
LIMS4-204ENST00000632897 FOXO4P98177 505 aa17.4■□□□□ 0.38
LIMS4-204ENST00000632897 TBC1D2Q9BYX2 928 aa17.4■□□□□ 0.38
LIMS4-204ENST00000632897 ECHDC1Q9NTX5 307 aa17.4■□□□□ 0.38
LIMS4-204ENST00000632897 GIGYF2Q6Y7W6 1299 aaKnown RBP17.39■□□□□ 0.37
LIMS4-204ENST00000632897 SNX21Q969T3 373 aa17.39■□□□□ 0.37
LIMS4-204ENST00000632897 USP26Q9BXU7 913 aa17.39■□□□□ 0.37
LIMS4-204ENST00000632897 ZNF831Q5JPB2 1677 aa17.39■□□□□ 0.37
LIMS4-204ENST00000632897 ERVV-1B6SEH8 477 aa17.38■□□□□ 0.37
LIMS4-204ENST00000632897 CHMLP26374 656 aa17.38■□□□□ 0.37
LIMS4-204ENST00000632897 PTPN12Q05209 780 aaKnown RBP17.38■□□□□ 0.37
LIMS4-204ENST00000632897 AACSQ86V21 672 aa17.38■□□□□ 0.37
LIMS4-204ENST00000632897 CNTROBQ8N137 903 aa17.38■□□□□ 0.37
LIMS4-204ENST00000632897 JARID2Q92833 1246 aaPredicted RBP17.38■□□□□ 0.37
LIMS4-204ENST00000632897 RILPL2Q969X0 211 aa17.38■□□□□ 0.37
LIMS4-204ENST00000632897 ZBTB1Q9Y2K1 713 aa17.38■□□□□ 0.37
LIMS4-204ENST00000632897 ZNF330Q9Y3S2 320 aaPredicted RBP17.38■□□□□ 0.37
LIMS4-204ENST00000632897 ANKRD36CQ5JPF3 1778 aa17.38■□□□□ 0.37
LIMS4-204ENST00000632897 NHSQ6T4R5 1651 aa17.38■□□□□ 0.37
LIMS4-204ENST00000632897 PCCAP05165 728 aaPredicted RBP17.37■□□□□ 0.37
LIMS4-204ENST00000632897 LMBR1LQ6UX01 489 aa17.37■□□□□ 0.37
LIMS4-204ENST00000632897 ACSBG1Q96GR2 724 aa17.37■□□□□ 0.37
LIMS4-204ENST00000632897 ESYT1Q9BSJ8 1104 aa17.37■□□□□ 0.37
LIMS4-204ENST00000632897 PALLDQ8WX93 1383 aa17.37■□□□□ 0.37
LIMS4-204ENST00000632897 LOC102724428A0A0B4J2F2 783 aa17.37■□□□□ 0.37
LIMS4-204ENST00000632897 EPB41L2O43491 1005 aaKnown RBP17.37■□□□□ 0.37
LIMS4-204ENST00000632897 SIK1P57059 783 aa17.37■□□□□ 0.37
LIMS4-204ENST00000632897 HSCBQ8IWL3 235 aa17.37■□□□□ 0.37
LIMS4-204ENST00000632897 KIF2CQ99661 725 aa17.37■□□□□ 0.37
LIMS4-204ENST00000632897 PLA2G12BQ9BX93 195 aa17.37■□□□□ 0.37
LIMS4-204ENST00000632897 SIL1Q9H173 461 aa17.37■□□□□ 0.37
LIMS4-204ENST00000632897 SPON1Q9HCB6 807 aa17.37■□□□□ 0.37
LIMS4-204ENST00000632897 AK9Q5TCS8 1911 aa17.36■□□□□ 0.37
LIMS4-204ENST00000632897 KAT6BQ8WYB5 2073 aa17.36■□□□□ 0.37
LIMS4-204ENST00000632897 ZBTB38Q8NAP3 1195 aaPredicted RBP17.36■□□□□ 0.37
LIMS4-204ENST00000632897 CCDC87Q9NVE4 849 aa17.36■□□□□ 0.37
LIMS4-204ENST00000632897 PPP1R1BQ9UD71 204 aaPredicted RBP17.36■□□□□ 0.37
LIMS4-204ENST00000632897 CDHR2Q9BYE9 1310 aa17.35■□□□□ 0.37
LIMS4-204ENST00000632897 KLHDC4Q8TBB5 520 aa17.35■□□□□ 0.37
LIMS4-204ENST00000632897 EAF2Q96CJ1 260 aaPredicted RBP17.35■□□□□ 0.37
LIMS4-204ENST00000632897 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
LIMS4-204ENST00000632897 EIF5P55010 431 aaKnown RBP17.34■□□□□ 0.37
LIMS4-204ENST00000632897 RABEP1Q15276 862 aa17.34■□□□□ 0.37
LIMS4-204ENST00000632897 DCAF8L1A6NGE4 600 aa17.33■□□□□ 0.37
LIMS4-204ENST00000632897 KCNQ2O43526 872 aa17.33■□□□□ 0.37
LIMS4-204ENST00000632897 CIAO1O76071 339 aa17.33■□□□□ 0.37
LIMS4-204ENST00000632897 INTS5Q6P9B9 1019 aaKnown RBP17.33■□□□□ 0.37
LIMS4-204ENST00000632897 NLRP10Q86W26 655 aa17.33■□□□□ 0.37
LIMS4-204ENST00000632897 DZIP3Q86Y13 1208 aaKnown RBP17.33■□□□□ 0.37
LIMS4-204ENST00000632897 FBXO3Q9UK99 471 aa17.33■□□□□ 0.37
LIMS4-204ENST00000632897 CRKLP46109 303 aaKnown RBP17.32■□□□□ 0.36
LIMS4-204ENST00000632897 HLFQ16534 295 aa17.32■□□□□ 0.36
LIMS4-204ENST00000632897 EVI5LQ96CN4 794 aa17.32■□□□□ 0.36
LIMS4-204ENST00000632897 GPR108Q9NPR9 543 aa17.32■□□□□ 0.36
LIMS4-204ENST00000632897 STK32BQ9NY57 414 aa17.32■□□□□ 0.36
LIMS4-204ENST00000632897 CHMP3Q9Y3E7 222 aa17.32■□□□□ 0.36
LIMS4-204ENST00000632897 COL5A3P25940 1745 aaPredicted RBP17.32■□□□□ 0.36
LIMS4-204ENST00000632897 NUP98P52948 1817 aa17.32■□□□□ 0.36
LIMS4-204ENST00000632897 MCCP23508 829 aa17.31■□□□□ 0.36
LIMS4-204ENST00000632897 IL15P40933 162 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms