RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	NBPF14	Q5TI25	921 aa		18.47	■□□□□ 0.55
BBS1-225	ENST00000630659	NBPF10	Q6P3W6	841 aa	Known RBP	18.47	■□□□□ 0.55
BBS1-225	ENST00000630659	NBPF15	Q8N660	670 aa		18.47	■□□□□ 0.55
BBS1-225	ENST00000630659	MYD88	Q99836	296 aa		18.47	■□□□□ 0.55
BBS1-225	ENST00000630659	CWC22	Q9HCG8	908 aa	Known RBP	18.47	■□□□□ 0.55
BBS1-225	ENST00000630659	NWD2	Q9ULI1	1742 aa		18.47	■□□□□ 0.55
BBS1-225	ENST00000630659	SLIT2	O94813	1529 aa		18.47	■□□□□ 0.55
BBS1-225	ENST00000630659	ITGB4	P16144	1822 aa		18.46	■□□□□ 0.55
BBS1-225	ENST00000630659	NEURL1B	A8MQ27	555 aa		18.46	■□□□□ 0.55
BBS1-225	ENST00000630659	RAB11FIP3	O75154	756 aa		18.46	■□□□□ 0.55
BBS1-225	ENST00000630659	PLBD2	Q8NHP8	589 aa		18.46	■□□□□ 0.55
BBS1-225	ENST00000630659	KIF2C	Q99661	725 aa		18.46	■□□□□ 0.55
BBS1-225	ENST00000630659	ATG3	Q9NT62	314 aa		18.46	■□□□□ 0.55
BBS1-225	ENST00000630659	ZHX1	Q9UKY1	873 aa	Predicted RBP	18.46	■□□□□ 0.55
BBS1-225	ENST00000630659	SPATA31A5	Q5VU36	1347 aa		18.46	■□□□□ 0.55
BBS1-225	ENST00000630659	SPATA31A7	Q8IWB4	1347 aa		18.46	■□□□□ 0.55
BBS1-225	ENST00000630659	GSPT1	P15170	499 aa	Known RBP	18.45	■□□□□ 0.54
BBS1-225	ENST00000630659	LRSAM1	Q6UWE0	723 aa		18.45	■□□□□ 0.54
BBS1-225	ENST00000630659	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.45	■□□□□ 0.54
BBS1-225	ENST00000630659	RBSN	Q9H1K0	784 aa		18.45	■□□□□ 0.54
BBS1-225	ENST00000630659	ASAP1	Q9ULH1	1129 aa		18.45	■□□□□ 0.54
BBS1-225	ENST00000630659	SURF6	O75683	361 aa	Known RBP	18.45	■□□□□ 0.54
BBS1-225	ENST00000630659	A1BG	P04217	495 aa		18.45	■□□□□ 0.54
BBS1-225	ENST00000630659	GCKR	Q14397	625 aa		18.45	■□□□□ 0.54
BBS1-225	ENST00000630659	CAVIN1	Q6NZI2	390 aa	Known RBP	18.45	■□□□□ 0.54
BBS1-225	ENST00000630659	BCL9	O00512	1426 aa		18.44	■□□□□ 0.54
BBS1-225	ENST00000630659	DDB1	Q16531	1140 aa		18.44	■□□□□ 0.54
BBS1-225	ENST00000630659	OSBPL3	Q9H4L5	887 aa		18.44	■□□□□ 0.54
BBS1-225	ENST00000630659	LMBRD1	Q9NUN5	540 aa		18.44	■□□□□ 0.54
BBS1-225	ENST00000630659	JCAD	Q9P266	1359 aa		18.44	■□□□□ 0.54
BBS1-225	ENST00000630659	RABEP1	Q15276	862 aa		18.43	■□□□□ 0.54
BBS1-225	ENST00000630659	SUCLG2	Q96I99	432 aa		18.43	■□□□□ 0.54
BBS1-225	ENST00000630659	ARFGEF2	Q9Y6D5	1785 aa		18.43	■□□□□ 0.54
BBS1-225	ENST00000630659	CDC45	O75419	566 aa		18.43	■□□□□ 0.54
BBS1-225	ENST00000630659	CYP2E1	P05181	493 aa	Predicted RBP	18.43	■□□□□ 0.54
BBS1-225	ENST00000630659	PDE4C	Q08493	712 aa		18.43	■□□□□ 0.54
BBS1-225	ENST00000630659	HSP90AB4P	Q58FF6	505 aa		18.43	■□□□□ 0.54
BBS1-225	ENST00000630659	CCDC9	Q9Y3X0	531 aa	Known RBP	18.43	■□□□□ 0.54
BBS1-225	ENST00000630659	MBD3	O95983	291 aa		18.42	■□□□□ 0.54
BBS1-225	ENST00000630659	PDE1A	P54750	535 aa		18.42	■□□□□ 0.54
BBS1-225	ENST00000630659	BARGIN	Q6ZT62	677 aa		18.42	■□□□□ 0.54
BBS1-225	ENST00000630659	SALL3	Q9BXA9	1300 aa		18.42	■□□□□ 0.54
BBS1-225	ENST00000630659	PPP4R3B	Q5MIZ7	849 aa		18.41	■□□□□ 0.54
BBS1-225	ENST00000630659	TBC1D9	Q6ZT07	1266 aa		18.41	■□□□□ 0.54
BBS1-225	ENST00000630659	KAZALD1	Q96I82	304 aa		18.41	■□□□□ 0.54
BBS1-225	ENST00000630659	MCTP1	Q6DN14	999 aa		18.41	■□□□□ 0.54
BBS1-225	ENST00000630659	TTLL7	Q6ZT98	887 aa		18.41	■□□□□ 0.54
BBS1-225	ENST00000630659	UNC5CL	Q8IV45	518 aa		18.41	■□□□□ 0.54
BBS1-225	ENST00000630659	DNAJC10	Q8IXB1	793 aa		18.41	■□□□□ 0.54
BBS1-225	ENST00000630659	KIF1BP	Q96EK5	621 aa		18.41	■□□□□ 0.54
BBS1-225	ENST00000630659	RBM42	Q9BTD8	480 aa	Known RBP	18.41	■□□□□ 0.54
BBS1-225	ENST00000630659	PRIM1	P49642	420 aa	Known RBP	18.4	■□□□□ 0.54
BBS1-225	ENST00000630659	RHPN1	Q8TCX5	695 aa		18.4	■□□□□ 0.54
BBS1-225	ENST00000630659	BICC1	Q9H694	974 aa	Known RBP	18.4	■□□□□ 0.54
BBS1-225	ENST00000630659	AFDN	P55196	1824 aa	Known RBP	18.39	■□□□□ 0.54
BBS1-225	ENST00000630659	STARD3NL	O95772	234 aa		18.39	■□□□□ 0.53
BBS1-225	ENST00000630659	SYTL4	Q96C24	671 aa	Predicted RBP	18.39	■□□□□ 0.53
BBS1-225	ENST00000630659	PRDM10	Q9NQV6	1147 aa		18.39	■□□□□ 0.53
BBS1-225	ENST00000630659	ATP5J2-PTCD1	G3V325	749 aa		18.39	■□□□□ 0.53
BBS1-225	ENST00000630659	SDS	P20132	328 aa		18.39	■□□□□ 0.53
BBS1-225	ENST00000630659	MX1	P20591	662 aa		18.39	■□□□□ 0.53
BBS1-225	ENST00000630659	STAP2	Q9UGK3	403 aa		18.39	■□□□□ 0.53
BBS1-225	ENST00000630659	KLHL34	Q8N239	644 aa		18.38	■□□□□ 0.53
BBS1-225	ENST00000630659	NGLY1	Q96IV0	654 aa		18.38	■□□□□ 0.53
BBS1-225	ENST00000630659	IL1RAPL2	Q9NP60	686 aa		18.38	■□□□□ 0.53
BBS1-225	ENST00000630659	NUP188	Q5SRE5	1749 aa		18.38	■□□□□ 0.53
BBS1-225	ENST00000630659	DOT1L	Q8TEK3	1739 aa		18.38	■□□□□ 0.53
BBS1-225	ENST00000630659	MARCH10	Q8NA82	808 aa	Predicted RBP	18.37	■□□□□ 0.53
BBS1-225	ENST00000630659	C8orf37	Q96NL8	207 aa		18.37	■□□□□ 0.53
BBS1-225	ENST00000630659	COL15A1	P39059	1388 aa		18.37	■□□□□ 0.53
BBS1-225	ENST00000630659	KAT6B	Q8WYB5	2073 aa		18.37	■□□□□ 0.53
BBS1-225	ENST00000630659	PTMA	P06454	111 aa	Known RBP	18.37	■□□□□ 0.53
BBS1-225	ENST00000630659	OS9	Q13438	667 aa	Predicted RBP	18.37	■□□□□ 0.53
BBS1-225	ENST00000630659	CERK	Q8TCT0	537 aa		18.37	■□□□□ 0.53
BBS1-225	ENST00000630659	PIBF1	Q8WXW3	757 aa		18.37	■□□□□ 0.53
BBS1-225	ENST00000630659	SYAP1	Q96A49	352 aa	Predicted RBP	18.37	■□□□□ 0.53
BBS1-225	ENST00000630659	AOX1	Q06278	1338 aa		18.36	■□□□□ 0.53
BBS1-225	ENST00000630659		A0A087WZG4	1122 aa		18.36	■□□□□ 0.53
BBS1-225	ENST00000630659	VPS72	Q15906	364 aa		18.36	■□□□□ 0.53
BBS1-225	ENST00000630659	ERC1	Q8IUD2	1116 aa		18.36	■□□□□ 0.53
BBS1-225	ENST00000630659	FAM184A	Q8NB25	1140 aa		18.36	■□□□□ 0.53
BBS1-225	ENST00000630659	ZBTB3	Q9H5J0	574 aa		18.36	■□□□□ 0.53
BBS1-225	ENST00000630659	KIF3A	Q9Y496	699 aa		18.36	■□□□□ 0.53
BBS1-225	ENST00000630659	PHF14	O94880	888 aa		18.35	■□□□□ 0.53
BBS1-225	ENST00000630659	CD2BP2	O95400	341 aa	Known RBP	18.35	■□□□□ 0.53
BBS1-225	ENST00000630659	SLC4A9	Q96Q91	983 aa		18.35	■□□□□ 0.53
BBS1-225	ENST00000630659	BCL9L	Q86UU0	1499 aa		18.35	■□□□□ 0.53
BBS1-225	ENST00000630659	SPATA31A6	Q5VVP1	1343 aa		18.35	■□□□□ 0.53
BBS1-225	ENST00000630659	UVSSA	Q2YD98	709 aa		18.35	■□□□□ 0.53
BBS1-225	ENST00000630659	EPHA10	Q5JZY3	1008 aa		18.35	■□□□□ 0.53
BBS1-225	ENST00000630659	DNTTIP2	Q5QJE6	756 aa	Known RBP	18.35	■□□□□ 0.53
BBS1-225	ENST00000630659	AEBP2	Q6ZN18	517 aa	Predicted RBP	18.35	■□□□□ 0.53
BBS1-225	ENST00000630659	UBE3B	Q7Z3V4	1068 aa		18.35	■□□□□ 0.53
BBS1-225	ENST00000630659	BBX	Q8WY36	941 aa	Predicted RBP	18.35	■□□□□ 0.53
BBS1-225	ENST00000630659	CWC25	Q9NXE8	425 aa	Predicted RBP	18.35	■□□□□ 0.53
BBS1-225	ENST00000630659	PA2G4	Q9UQ80	394 aa	Known RBP	18.35	■□□□□ 0.53
BBS1-225	ENST00000630659	CYP19A1	P11511	503 aa	Predicted RBP	18.34	■□□□□ 0.53
BBS1-225	ENST00000630659	CASP7	P55210	303 aa		18.34	■□□□□ 0.53
BBS1-225	ENST00000630659	CASC1	Q6TDU7	716 aa		18.34	■□□□□ 0.53
BBS1-225	ENST00000630659	NUTM1	Q86Y26	1132 aa		18.34	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms