RNA–Protein interactions for RNA: ENST00000628397.2

CCDC163-205, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-205ENST00000628397 UBN2Q6ZU65 1347 aa15.4■□□□□ 0.06
CCDC163-205ENST00000628397 TRIM28Q13263 835 aaKnown RBP15.39■□□□□ 0.05
CCDC163-205ENST00000628397 NLRP10Q86W26 655 aa15.39■□□□□ 0.05
CCDC163-205ENST00000628397 EXOC6Q8TAG9 804 aa15.39■□□□□ 0.05
CCDC163-205ENST00000628397 SETDB2Q96T68 719 aa15.39■□□□□ 0.05
CCDC163-205ENST00000628397 MEIS3Q99687 375 aa15.39■□□□□ 0.05
CCDC163-205ENST00000628397 CARMIL3Q8ND23 1372 aa15.38■□□□□ 0.05
CCDC163-205ENST00000628397 GRM8O00222 908 aa15.38■□□□□ 0.05
CCDC163-205ENST00000628397 GNAI3P08754 354 aa15.38■□□□□ 0.05
CCDC163-205ENST00000628397 UBTFL1P0CB47 393 aaPredicted RBP15.38■□□□□ 0.05
CCDC163-205ENST00000628397 R3HDM1Q15032 1099 aaKnown RBP15.38■□□□□ 0.05
CCDC163-205ENST00000628397 PPP1R42Q7Z4L9 355 aa15.38■□□□□ 0.05
CCDC163-205ENST00000628397 NLGN1Q8N2Q7 840 aa15.38■□□□□ 0.05
CCDC163-205ENST00000628397 MYH3P11055 1940 aa15.37■□□□□ 0.05
CCDC163-205ENST00000628397 FAM177BA6PVY3 158 aa15.37■□□□□ 0.05
CCDC163-205ENST00000628397 ZBTB7BO15156 539 aaPredicted RBP15.37■□□□□ 0.05
CCDC163-205ENST00000628397 NFIXQ14938 502 aa15.37■□□□□ 0.05
CCDC163-205ENST00000628397 MSL1Q68DK7 614 aa15.37■□□□□ 0.05
CCDC163-205ENST00000628397 NPHP1O15259 732 aa15.36■□□□□ 0.05
CCDC163-205ENST00000628397 SUSD4Q5VX71 490 aa15.36■□□□□ 0.05
CCDC163-205ENST00000628397 UBE3BQ7Z3V4 1068 aa15.36■□□□□ 0.05
CCDC163-205ENST00000628397 SLC16A10Q8TF71 515 aa15.36■□□□□ 0.05
CCDC163-205ENST00000628397 UTP14AQ9BVJ6 771 aaKnown RBP15.36■□□□□ 0.05
CCDC163-205ENST00000628397 NYXQ9GZU5 481 aa15.36■□□□□ 0.05
CCDC163-205ENST00000628397 USP44Q9H0E7 712 aa15.36■□□□□ 0.05
CCDC163-205ENST00000628397 TRMT112Q9UI30 125 aaKnown RBP15.36■□□□□ 0.05
CCDC163-205ENST00000628397 HDAC5Q9UQL6 1122 aa15.36■□□□□ 0.05
CCDC163-205ENST00000628397 DDX60Q8IY21 1712 aaKnown RBP15.36■□□□□ 0.05
CCDC163-205ENST00000628397 PSDA5PKW4 1024 aaPredicted RBP15.35■□□□□ 0.05
CCDC163-205ENST00000628397 PCCAP05165 728 aaPredicted RBP15.35■□□□□ 0.05
CCDC163-205ENST00000628397 NBPF7P0C2Y1 421 aaPredicted RBP15.35■□□□□ 0.05
CCDC163-205ENST00000628397 AAMPQ13685 434 aa15.35■□□□□ 0.05
CCDC163-205ENST00000628397 RTL5Q5HYW3 569 aaPredicted RBP15.35■□□□□ 0.05
CCDC163-205ENST00000628397 NBPF5PQ86XG9 351 aaPredicted RBP15.35■□□□□ 0.05
CCDC163-205ENST00000628397 ZBTB38Q8NAP3 1195 aaPredicted RBP15.35■□□□□ 0.05
CCDC163-205ENST00000628397 PDGFDQ9GZP0 370 aaPredicted RBP15.35■□□□□ 0.05
CCDC163-205ENST00000628397 UTYO14607 1347 aa15.35■□□□□ 0.05
CCDC163-205ENST00000628397 SH3TC1Q8TE82 1336 aa15.35■□□□□ 0.05
CCDC163-205ENST00000628397 NRXN2Q9P2S2 1712 aa15.34■□□□□ 0.05
CCDC163-205ENST00000628397 H7C1W4 665 aa15.34■□□□□ 0.05
CCDC163-205ENST00000628397 NTSR2O95665 410 aa15.34■□□□□ 0.05
CCDC163-205ENST00000628397 GTF2E1P29083 439 aaPredicted RBP15.34■□□□□ 0.05
CCDC163-205ENST00000628397 JARID2Q92833 1246 aaPredicted RBP15.34■□□□□ 0.05
CCDC163-205ENST00000628397 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
CCDC163-205ENST00000628397 C1orf115Q9H7X2 142 aa15.34■□□□□ 0.05
CCDC163-205ENST00000628397 ZBTB40Q9NUA8 1239 aa15.34■□□□□ 0.05
CCDC163-205ENST00000628397 GNAI2P04899 355 aa15.33■□□□□ 0.04
CCDC163-205ENST00000628397 TM4SF1P30408 202 aa15.33■□□□□ 0.04
CCDC163-205ENST00000628397 LRRFIP2Q9Y608 721 aaKnown RBP15.33■□□□□ 0.04
CCDC163-205ENST00000628397 CDHR2Q9BYE9 1310 aa15.33■□□□□ 0.04
CCDC163-205ENST00000628397 POLRMTO00411 1230 aaKnown RBP15.32■□□□□ 0.04
CCDC163-205ENST00000628397 SERPINB2P05120 415 aa15.32■□□□□ 0.04
CCDC163-205ENST00000628397 MMP10P09238 476 aa15.32■□□□□ 0.04
CCDC163-205ENST00000628397 HSP90B1P14625 803 aaKnown RBP15.32■□□□□ 0.04
CCDC163-205ENST00000628397 CASP7P55210 303 aa15.32■□□□□ 0.04
CCDC163-205ENST00000628397 DDR1Q08345 913 aa15.32■□□□□ 0.04
CCDC163-205ENST00000628397 ERICH6BQ5W0A0 696 aa15.32■□□□□ 0.04
CCDC163-205ENST00000628397 TPTE2Q6XPS3 522 aa15.32■□□□□ 0.04
CCDC163-205ENST00000628397 NUTM1Q86Y26 1132 aa15.32■□□□□ 0.04
CCDC163-205ENST00000628397 CNBD1Q8NA66 436 aa15.32■□□□□ 0.04
CCDC163-205ENST00000628397 SUCLG2Q96I99 432 aa15.32■□□□□ 0.04
CCDC163-205ENST00000628397 PARP3Q9Y6F1 533 aa15.32■□□□□ 0.04
CCDC163-205ENST00000628397 SOCS7O14512 581 aa15.31■□□□□ 0.04
CCDC163-205ENST00000628397 IRS4O14654 1257 aaPredicted RBP15.31■□□□□ 0.04
CCDC163-205ENST00000628397 ST5P78524 1137 aa15.31■□□□□ 0.04
CCDC163-205ENST00000628397 TNRC6CQ9HCJ0 1690 aaKnown RBP15.31■□□□□ 0.04
CCDC163-205ENST00000628397 ZBTB7AO95365 584 aa15.3■□□□□ 0.04
CCDC163-205ENST00000628397 ERFEQ4G0M1 354 aa15.3■□□□□ 0.04
CCDC163-205ENST00000628397 ABCC12Q96J65 1359 aa15.3■□□□□ 0.04
CCDC163-205ENST00000628397 MTFR1LQ9H019 292 aa15.3■□□□□ 0.04
CCDC163-205ENST00000628397 ANKRD31Q8N7Z5 1873 aa15.29■□□□□ 0.04
CCDC163-205ENST00000628397 PDE8AO60658 829 aa15.29■□□□□ 0.04
CCDC163-205ENST00000628397 PRR5LQ6MZQ0 368 aa15.29■□□□□ 0.04
CCDC163-205ENST00000628397 SYNE4Q8N205 404 aa15.29■□□□□ 0.04
CCDC163-205ENST00000628397 BICC1Q9H694 974 aaKnown RBP15.29■□□□□ 0.04
CCDC163-205ENST00000628397 RIC1Q4ADV7 1423 aa15.28■□□□□ 0.04
CCDC163-205ENST00000628397 HCLS1P14317 486 aaPredicted RBP15.28■□□□□ 0.04
CCDC163-205ENST00000628397 POLD1P28340 1107 aa15.28■□□□□ 0.04
CCDC163-205ENST00000628397 PLA2G12BQ9BX93 195 aa15.28■□□□□ 0.04
CCDC163-205ENST00000628397 CHMP3Q9Y3E7 222 aa15.28■□□□□ 0.04
CCDC163-205ENST00000628397 CTSWP56202 376 aa15.27■□□□□ 0.04
CCDC163-205ENST00000628397 CEP85Q6P2H3 762 aa15.27■□□□□ 0.04
CCDC163-205ENST00000628397 CCDC24Q8N4L8 307 aa15.27■□□□□ 0.04
CCDC163-205ENST00000628397 KAZALD1Q96I82 304 aa15.27■□□□□ 0.04
CCDC163-205ENST00000628397 ATF5Q9Y2D1 282 aaPredicted RBP15.27■□□□□ 0.04
CCDC163-205ENST00000628397 GTF3C3Q9Y5Q9 886 aa15.27■□□□□ 0.04
CCDC163-205ENST00000628397 FOXO4P98177 505 aa15.26■□□□□ 0.03
CCDC163-205ENST00000628397 EPHA10Q5JZY3 1008 aa15.26■□□□□ 0.03
CCDC163-205ENST00000628397 RPAP2Q8IXW5 612 aaPredicted RBP15.26■□□□□ 0.03
CCDC163-205ENST00000628397 ANKRD44Q8N8A2 993 aa15.26■□□□□ 0.03
CCDC163-205ENST00000628397 PCDHB15Q9Y5E8 787 aa15.26■□□□□ 0.03
CCDC163-205ENST00000628397 SPEF2Q9C093 1822 aa15.26■□□□□ 0.03
CCDC163-205ENST00000628397 HMMRO75330 724 aa15.25■□□□□ 0.03
CCDC163-205ENST00000628397 RABL6Q3YEC7 729 aaPredicted RBP15.25■□□□□ 0.03
CCDC163-205ENST00000628397 SLC10A5Q5PT55 438 aa15.25■□□□□ 0.03
CCDC163-205ENST00000628397 LMBR1LQ6UX01 489 aa15.25■□□□□ 0.03
CCDC163-205ENST00000628397 NLRP3Q96P20 1036 aa15.25■□□□□ 0.03
CCDC163-205ENST00000628397 PPP4R2Q9NY27 417 aa15.25■□□□□ 0.03
CCDC163-205ENST00000628397 COL11A2P13942 1736 aaPredicted RBP15.25■□□□□ 0.03
CCDC163-205ENST00000628397 KIF13BQ9NQT8 1826 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms