RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 MYL6BP14649 208 aa12.52□□□□□ -0.41
SOX2-OT-244ENST00000627738 TPRNQ4KMQ1 711 aa12.52□□□□□ -0.41
SOX2-OT-244ENST00000627738 PI4KAP2A4QPH2 592 aa12.51□□□□□ -0.41
SOX2-OT-244ENST00000627738 PIP4K2AP48426 406 aaPredicted RBP12.51□□□□□ -0.41
SOX2-OT-244ENST00000627738 PI4KAP1Q8N8J0 262 aa12.51□□□□□ -0.41
SOX2-OT-244ENST00000627738 DDX27Q96GQ7 796 aaKnown RBP12.51□□□□□ -0.41
SOX2-OT-244ENST00000627738 C1orf115Q9H7X2 142 aa12.51□□□□□ -0.41
SOX2-OT-244ENST00000627738 QTRT2Q9H974 415 aaKnown RBP12.51□□□□□ -0.41
SOX2-OT-244ENST00000627738 PXDNLA1KZ92 1463 aa12.51□□□□□ -0.41
SOX2-OT-244ENST00000627738 KAT6BQ8WYB5 2073 aa12.5□□□□□ -0.41
SOX2-OT-244ENST00000627738 AIMP1Q12904 312 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-244ENST00000627738 KSR2Q6VAB6 950 aa12.5□□□□□ -0.41
SOX2-OT-244ENST00000627738 DNAJC10Q8IXB1 793 aa12.5□□□□□ -0.41
SOX2-OT-244ENST00000627738 MICALL2Q8IY33 904 aa12.5□□□□□ -0.41
SOX2-OT-244ENST00000627738 XAGE3Q8WTP9 111 aa12.5□□□□□ -0.41
SOX2-OT-244ENST00000627738 DNAAF4Q8WXU2 420 aa12.5□□□□□ -0.41
SOX2-OT-244ENST00000627738 MEIS3Q99687 375 aa12.5□□□□□ -0.41
SOX2-OT-244ENST00000627738 CRISPLD2Q9H0B8 497 aa12.5□□□□□ -0.41
SOX2-OT-244ENST00000627738 RWDD1Q9H446 243 aaPredicted RBP12.5□□□□□ -0.41
SOX2-OT-244ENST00000627738 ADCY9O60503 1353 aa12.5□□□□□ -0.41
SOX2-OT-244ENST00000627738 ERBB4Q15303 1308 aa12.49□□□□□ -0.41
SOX2-OT-244ENST00000627738 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
SOX2-OT-244ENST00000627738 ONECUT3O60422 494 aaPredicted RBP12.49□□□□□ -0.41
SOX2-OT-244ENST00000627738 DDX58O95786 925 aaKnown RBP12.49□□□□□ -0.41
SOX2-OT-244ENST00000627738 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
SOX2-OT-244ENST00000627738 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
SOX2-OT-244ENST00000627738 COPS6Q7L5N1 327 aa12.49□□□□□ -0.41
SOX2-OT-244ENST00000627738 LRP10Q7Z4F1 713 aa12.49□□□□□ -0.41
SOX2-OT-244ENST00000627738 NBPF15Q8N660 670 aa12.49□□□□□ -0.41
SOX2-OT-244ENST00000627738 TEX13AQ9BXU3 409 aaPredicted RBP12.49□□□□□ -0.41
SOX2-OT-244ENST00000627738 MAP3K2Q9Y2U5 619 aa12.49□□□□□ -0.41
SOX2-OT-244ENST00000627738 KCNQ2O43526 872 aa12.48□□□□□ -0.41
SOX2-OT-244ENST00000627738 A1BGP04217 495 aa12.48□□□□□ -0.41
SOX2-OT-244ENST00000627738 HDAC1Q13547 482 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-244ENST00000627738 BEND3Q5T5X7 828 aa12.48□□□□□ -0.41
SOX2-OT-244ENST00000627738 SEPT12Q8IYM1 358 aa12.48□□□□□ -0.41
SOX2-OT-244ENST00000627738 SLC4A9Q96Q91 983 aa12.48□□□□□ -0.41
SOX2-OT-244ENST00000627738 KRTAP3-3Q9BYR6 98 aa12.48□□□□□ -0.41
SOX2-OT-244ENST00000627738 KRTAP3-2Q9BYR7 98 aa12.48□□□□□ -0.41
SOX2-OT-244ENST00000627738 SRCIN1Q9C0H9 1055 aa12.48□□□□□ -0.41
SOX2-OT-244ENST00000627738 N4BP2Q86UW6 1770 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-244ENST00000627738 RIC3Q7Z5B4 369 aa12.47□□□□□ -0.41
SOX2-OT-244ENST00000627738 ATP10DQ9P241 1426 aa12.46□□□□□ -0.41
SOX2-OT-244ENST00000627738 STARD3NLO95772 234 aa12.46□□□□□ -0.41
SOX2-OT-244ENST00000627738 DOK7Q18PE1 504 aa12.46□□□□□ -0.41
SOX2-OT-244ENST00000627738 FAM182BQ5T319 152 aa12.46□□□□□ -0.41
SOX2-OT-244ENST00000627738 SKAP1Q86WV1 359 aa12.46□□□□□ -0.41
SOX2-OT-244ENST00000627738 GNAI3P08754 354 aa12.45□□□□□ -0.42
SOX2-OT-244ENST00000627738 MFSD10Q14728 455 aa12.45□□□□□ -0.42
SOX2-OT-244ENST00000627738 ANKRD13DQ6ZTN6 518 aa12.45□□□□□ -0.42
SOX2-OT-244ENST00000627738 SIRT2Q8IXJ6 389 aa12.45□□□□□ -0.42
SOX2-OT-244ENST00000627738 TMC2Q8TDI7 906 aa12.45□□□□□ -0.42
SOX2-OT-244ENST00000627738 SMARCC1Q92922 1105 aaPredicted RBP12.45□□□□□ -0.42
SOX2-OT-244ENST00000627738 USP44Q9H0E7 712 aa12.45□□□□□ -0.42
SOX2-OT-244ENST00000627738 PALLDQ8WX93 1383 aa12.44□□□□□ -0.42
SOX2-OT-244ENST00000627738 ALDH1L1O75891 902 aa12.44□□□□□ -0.42
SOX2-OT-244ENST00000627738 GNAI2P04899 355 aa12.44□□□□□ -0.42
SOX2-OT-244ENST00000627738 CYP19A1P11511 503 aaPredicted RBP12.44□□□□□ -0.42
SOX2-OT-244ENST00000627738 ATP6V1AP38606 617 aa12.44□□□□□ -0.42
SOX2-OT-244ENST00000627738 ZNF772Q68DY9 489 aaPredicted RBP12.44□□□□□ -0.42
SOX2-OT-244ENST00000627738 CEP85Q6P2H3 762 aa12.44□□□□□ -0.42
SOX2-OT-244ENST00000627738 TTLL7Q6ZT98 887 aa12.44□□□□□ -0.42
SOX2-OT-244ENST00000627738 RPAP2Q8IXW5 612 aaPredicted RBP12.44□□□□□ -0.42
SOX2-OT-244ENST00000627738 ANKRD44Q8N8A2 993 aa12.44□□□□□ -0.42
SOX2-OT-244ENST00000627738 FBXO41Q8TF61 875 aa12.44□□□□□ -0.42
SOX2-OT-244ENST00000627738 ARHGEF1Q92888 912 aaKnown RBP12.44□□□□□ -0.42
SOX2-OT-244ENST00000627738 METTL22Q9BUU2 404 aaPredicted RBP12.44□□□□□ -0.42
SOX2-OT-244ENST00000627738 TJP1Q07157 1748 aa12.43□□□□□ -0.42
SOX2-OT-244ENST00000627738 LOC102724428A0A0B4J2F2 783 aa12.43□□□□□ -0.42
SOX2-OT-244ENST00000627738 SIK1P57059 783 aa12.43□□□□□ -0.42
SOX2-OT-244ENST00000627738 CWF19L2Q2TBE0 894 aaKnown RBP12.43□□□□□ -0.42
SOX2-OT-244ENST00000627738 PTF1AQ7RTS3 328 aa12.43□□□□□ -0.42
SOX2-OT-244ENST00000627738 LINS1Q8NG48 757 aa12.43□□□□□ -0.42
SOX2-OT-244ENST00000627738 PLBD2Q8NHP8 589 aa12.43□□□□□ -0.42
SOX2-OT-244ENST00000627738 MYD88Q99836 296 aa12.43□□□□□ -0.42
SOX2-OT-244ENST00000627738 GPHNQ9NQX3 736 aaPredicted RBP12.43□□□□□ -0.42
SOX2-OT-244ENST00000627738 PDZRN3Q9UPQ7 1066 aa12.43□□□□□ -0.42
SOX2-OT-244ENST00000627738 IGKV5-2P06315 115 aa12.42□□□□□ -0.42
SOX2-OT-244ENST00000627738 UBTFL1P0CB47 393 aaPredicted RBP12.42□□□□□ -0.42
SOX2-OT-244ENST00000627738 HOXB1P14653 301 aaPredicted RBP12.42□□□□□ -0.42
SOX2-OT-244ENST00000627738 RBM6P78332 1123 aaKnown RBP12.42□□□□□ -0.42
SOX2-OT-244ENST00000627738 NEXNQ0ZGT2 675 aa12.42□□□□□ -0.42
SOX2-OT-244ENST00000627738 SMC5Q8IY18 1101 aa12.42□□□□□ -0.42
SOX2-OT-244ENST00000627738 ZNF330Q9Y3S2 320 aaPredicted RBP12.42□□□□□ -0.42
SOX2-OT-244ENST00000627738 LRRFIP2Q9Y608 721 aaKnown RBP12.42□□□□□ -0.42
SOX2-OT-244ENST00000627738 NHSQ6T4R5 1651 aa12.42□□□□□ -0.42
SOX2-OT-244ENST00000627738 NBPF7P0C2Y1 421 aaPredicted RBP12.41□□□□□ -0.42
SOX2-OT-244ENST00000627738 RGS3P49796 1198 aa12.41□□□□□ -0.42
SOX2-OT-244ENST00000627738 ITPK1Q13572 414 aa12.41□□□□□ -0.42
SOX2-OT-244ENST00000627738 PPP1R15BQ5SWA1 713 aa12.41□□□□□ -0.42
SOX2-OT-244ENST00000627738 TMEM92Q6UXU6 159 aa12.41□□□□□ -0.42
SOX2-OT-244ENST00000627738 C9orf78Q9NZ63 289 aaPredicted RBP12.41□□□□□ -0.42
SOX2-OT-244ENST00000627738 ZBTB1Q9Y2K1 713 aa12.41□□□□□ -0.42
SOX2-OT-244ENST00000627738 ARFGEF2Q9Y6D5 1785 aa12.41□□□□□ -0.42
SOX2-OT-244ENST00000627738 NEURL1BA8MQ27 555 aa12.4□□□□□ -0.42
SOX2-OT-244ENST00000627738 RIMBP2O15034 1052 aa12.4□□□□□ -0.42
SOX2-OT-244ENST00000627738 KIF6Q6ZMV9 814 aa12.4□□□□□ -0.42
SOX2-OT-244ENST00000627738 KRT27Q7Z3Y8 459 aa12.4□□□□□ -0.42
SOX2-OT-244ENST00000627738 GCC1Q96CN9 775 aa12.4□□□□□ -0.42
SOX2-OT-244ENST00000627738 ZBTB3Q9H5J0 574 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms