RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 PRPF38BQ5VTL8 546 aaKnown RBP11.66□□□□□ -0.54
TCF4-258ENST00000627320 NUTM1Q86Y26 1132 aa11.66□□□□□ -0.54
TCF4-258ENST00000627320 TRPM4Q8TD43 1214 aa11.66□□□□□ -0.54
TCF4-258ENST00000627320 USP16Q9Y5T5 823 aa11.66□□□□□ -0.54
TCF4-258ENST00000627320 LMOD1P29536 600 aaPredicted RBP11.65□□□□□ -0.54
TCF4-258ENST00000627320 MAP2K2P36507 400 aa11.65□□□□□ -0.54
TCF4-258ENST00000627320 IL6STP40189 918 aaPredicted RBP11.65□□□□□ -0.54
TCF4-258ENST00000627320 HIRAP54198 1017 aaPredicted RBP11.65□□□□□ -0.54
TCF4-258ENST00000627320 BRPF1P55201 1214 aaPredicted RBP11.65□□□□□ -0.54
TCF4-258ENST00000627320 C3orf67Q6ZVT6 689 aa11.65□□□□□ -0.54
TCF4-258ENST00000627320 TTC5Q8N0Z6 440 aa11.65□□□□□ -0.54
TCF4-258ENST00000627320 IL17REQ8NFR9 667 aa11.65□□□□□ -0.54
TCF4-258ENST00000627320 PANK3Q9H999 370 aa11.65□□□□□ -0.54
TCF4-258ENST00000627320 PDZRN3Q9UPQ7 1066 aa11.65□□□□□ -0.54
TCF4-258ENST00000627320 PAPPA2Q9BXP8 1791 aa11.64□□□□□ -0.55
TCF4-258ENST00000627320 STARD3NLO95772 234 aa11.64□□□□□ -0.55
TCF4-258ENST00000627320 EIF6P56537 245 aaKnown RBP11.64□□□□□ -0.55
TCF4-258ENST00000627320 CDCA8Q53HL2 280 aa11.64□□□□□ -0.55
TCF4-258ENST00000627320 DUOX1Q9NRD9 1551 aa11.63□□□□□ -0.55
TCF4-258ENST00000627320 MKI67P46013 3256 aaKnown RBP11.63□□□□□ -0.55
TCF4-258ENST00000627320 KLRG2A4D1S0 409 aaPredicted RBP11.63□□□□□ -0.55
TCF4-258ENST00000627320 FAM155AB1AL88 458 aaPredicted RBP11.63□□□□□ -0.55
TCF4-258ENST00000627320 NBPF26B4DH59 902 aa11.63□□□□□ -0.55
TCF4-258ENST00000627320 AOC3Q16853 763 aa11.63□□□□□ -0.55
TCF4-258ENST00000627320 NBPF10Q6P3W6 841 aaKnown RBP11.63□□□□□ -0.55
TCF4-258ENST00000627320 ZNF790Q6PG37 636 aa11.63□□□□□ -0.55
TCF4-258ENST00000627320 MORC1Q86VD1 984 aa11.63□□□□□ -0.55
TCF4-258ENST00000627320 LARGE2Q8N3Y3 721 aa11.63□□□□□ -0.55
TCF4-258ENST00000627320 NBPF15Q8N660 670 aa11.63□□□□□ -0.55
TCF4-258ENST00000627320 NIP7Q9Y221 180 aaKnown RBP eCLIP11.63□□□□□ -0.55
TCF4-258ENST00000627320 COL3A1P02461 1466 aaPredicted RBP11.63□□□□□ -0.55
TCF4-258ENST00000627320 DLG5Q8TDM6 1919 aa11.62□□□□□ -0.55
TCF4-258ENST00000627320 SCN9AQ15858 1988 aa11.62□□□□□ -0.55
TCF4-258ENST00000627320 RTKN2Q8IZC4 609 aa11.62□□□□□ -0.55
TCF4-258ENST00000627320 JDP2Q8WYK2 163 aa11.62□□□□□ -0.55
TCF4-258ENST00000627320 GPRC5DQ9NZD1 345 aa11.62□□□□□ -0.55
TCF4-258ENST00000627320 KDM3BQ7LBC6 1761 aa11.62□□□□□ -0.55
TCF4-258ENST00000627320 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
TCF4-258ENST00000627320 TRPA1O75762 1119 aa11.61□□□□□ -0.55
TCF4-258ENST00000627320 EGFRP00533 1210 aa11.61□□□□□ -0.55
TCF4-258ENST00000627320 GMPSP49915 693 aaPredicted RBP11.61□□□□□ -0.55
TCF4-258ENST00000627320 USP50Q70EL3 339 aaPredicted RBP11.61□□□□□ -0.55
TCF4-258ENST00000627320 PSMD1Q99460 953 aa11.61□□□□□ -0.55
TCF4-258ENST00000627320 SPINK5Q9NQ38 1064 aaPredicted RBP11.61□□□□□ -0.55
TCF4-258ENST00000627320 NPC1L1Q9UHC9 1359 aa11.61□□□□□ -0.55
TCF4-258ENST00000627320 HUNKP57058 714 aa11.6□□□□□ -0.55
TCF4-258ENST00000627320 KIF23Q02241 960 aaPredicted RBP11.6□□□□□ -0.55
TCF4-258ENST00000627320 CXCL9Q07325 125 aa11.6□□□□□ -0.55
TCF4-258ENST00000627320 USP48Q86UV5 1035 aa11.6□□□□□ -0.55
TCF4-258ENST00000627320 ADM5C9JUS6 153 aa11.59□□□□□ -0.55
TCF4-258ENST00000627320 PPIP5K2O43314 1243 aa11.59□□□□□ -0.55
TCF4-258ENST00000627320 RAD17O75943 681 aa11.59□□□□□ -0.55
TCF4-258ENST00000627320 NGEFQ8N5V2 710 aa11.59□□□□□ -0.55
TCF4-258ENST00000627320 ADARB2Q9NS39 739 aaKnown RBP11.59□□□□□ -0.55
TCF4-258ENST00000627320 RNF186Q9NXI6 227 aa11.59□□□□□ -0.55
TCF4-258ENST00000627320 HPS5Q9UPZ3 1129 aa11.59□□□□□ -0.55
TCF4-258ENST00000627320 RIC1Q4ADV7 1423 aa11.59□□□□□ -0.55
TCF4-258ENST00000627320 ANKRD36CQ5JPF3 1778 aa11.59□□□□□ -0.55
TCF4-258ENST00000627320 UBN2Q6ZU65 1347 aa11.59□□□□□ -0.55
TCF4-258ENST00000627320 SZT2Q5T011 3432 aa11.58□□□□□ -0.55
TCF4-258ENST00000627320 HTTP42858 3142 aa11.58□□□□□ -0.56
TCF4-258ENST00000627320 CA12O43570 354 aa11.58□□□□□ -0.56
TCF4-258ENST00000627320 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
TCF4-258ENST00000627320 TEFQ10587 303 aa11.58□□□□□ -0.56
TCF4-258ENST00000627320 CNGB1Q14028 1251 aaPredicted RBP11.58□□□□□ -0.56
TCF4-258ENST00000627320 CRY2Q49AN0 593 aa11.58□□□□□ -0.56
TCF4-258ENST00000627320 NIM1KQ8IY84 436 aa11.58□□□□□ -0.56
TCF4-258ENST00000627320 ZNF428Q96B54 188 aa11.58□□□□□ -0.56
TCF4-258ENST00000627320 FMNL2Q96PY5 1086 aa11.58□□□□□ -0.56
TCF4-258ENST00000627320 ASTN2O75129 1339 aaPredicted RBP11.58□□□□□ -0.56
TCF4-258ENST00000627320 LRRC37AA6NMS7 1700 aa11.57□□□□□ -0.56
TCF4-258ENST00000627320 PPEF1O14829 653 aaPredicted RBP11.57□□□□□ -0.56
TCF4-258ENST00000627320 GPTP24298 496 aa11.57□□□□□ -0.56
TCF4-258ENST00000627320 SCAF8Q9UPN6 1271 aaKnown RBP11.57□□□□□ -0.56
TCF4-258ENST00000627320 ZBTB12Q9Y330 459 aaPredicted RBP11.57□□□□□ -0.56
TCF4-258ENST00000627320 BRCA2P51587 3418 aa11.57□□□□□ -0.56
TCF4-258ENST00000627320 CENPFP49454 3210 aa11.57□□□□□ -0.56
TCF4-258ENST00000627320 DDX60Q8IY21 1712 aaKnown RBP11.57□□□□□ -0.56
TCF4-258ENST00000627320 YDJCA8MPS7 323 aa11.56□□□□□ -0.56
TCF4-258ENST00000627320 HABP4Q5JVS0 413 aaKnown RBP11.56□□□□□ -0.56
TCF4-258ENST00000627320 TPTE2Q6XPS3 522 aa11.56□□□□□ -0.56
TCF4-258ENST00000627320 SAMD7Q7Z3H4 446 aa11.56□□□□□ -0.56
TCF4-258ENST00000627320 RBBP6Q7Z6E9 1792 aaKnown RBP11.56□□□□□ -0.56
TCF4-258ENST00000627320 CEMIPQ8WUJ3 1361 aa11.55□□□□□ -0.56
TCF4-258ENST00000627320 BTBD11A6QL63 1104 aa11.55□□□□□ -0.56
TCF4-258ENST00000627320 ALDH1B1P30837 517 aa11.55□□□□□ -0.56
TCF4-258ENST00000627320 NOGQ13253 232 aa11.55□□□□□ -0.56
TCF4-258ENST00000627320 DCTN1Q14203 1278 aa11.55□□□□□ -0.56
TCF4-258ENST00000627320 TBC1D10BQ4KMP7 808 aaPredicted RBP11.55□□□□□ -0.56
TCF4-258ENST00000627320 RGMBQ6NW40 437 aa11.55□□□□□ -0.56
TCF4-258ENST00000627320 TTLL7Q6ZT98 887 aa11.55□□□□□ -0.56
TCF4-258ENST00000627320 HHIPL1Q96JK4 782 aa11.55□□□□□ -0.56
TCF4-258ENST00000627320 PHACTR3Q96KR7 559 aa11.55□□□□□ -0.56
TCF4-258ENST00000627320 PGAP2Q9UHJ9 254 aa11.55□□□□□ -0.56
TCF4-258ENST00000627320 ZNF646O15015 1829 aaPredicted RBP11.54□□□□□ -0.56
TCF4-258ENST00000627320 GNAT3A8MTJ3 354 aa11.54□□□□□ -0.56
TCF4-258ENST00000627320 GTF2E1P29083 439 aaPredicted RBP11.54□□□□□ -0.56
TCF4-258ENST00000627320 SUSD4Q5VX71 490 aa11.54□□□□□ -0.56
TCF4-258ENST00000627320 MOB2Q70IA6 237 aa11.54□□□□□ -0.56
TCF4-258ENST00000627320 MCM10Q7L590 875 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms