RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 PTPRCP08575 1304 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 NHSL1Q5SYE7 1610 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 KIAA0232Q92628 1395 aa5.02□□□□□ -1.61
PTP4A1-205ENST00000626021 GOLGA6L6A8MZA4 724 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 HMMRO75330 724 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 ADCY5O95622 1261 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 PRKAR2BP31323 418 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 NEK4P51957 841 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 CBX1P83916 185 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 ATP2B3Q16720 1220 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 USP48Q86UV5 1035 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 C16orf71Q8IYS4 520 aaPredicted RBP5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 RNF214Q8ND24 703 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 COG3Q96JB2 828 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 MBIPQ9NS73 344 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 ZHX1Q9UKY1 873 aaPredicted RBP5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 LAMB4A4D0S4 1761 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 SALL3Q9BXA9 1300 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 FLT4P35916 1363 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 RPAP1Q9BWH6 1393 aaPredicted RBP5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 PDIA4P13667 645 aaKnown RBP5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 UBE2HP62256 183 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 CHAF1AQ13111 956 aaPredicted RBP5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 SLC26A8Q96RN1 970 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 ESYT1Q9BSJ8 1104 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 PRDM10Q9NQV6 1147 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 EMILIN1Q9Y6C2 1016 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 NCKAP5LQ9HCH0 1330 aa5.01□□□□□ -1.61
PTP4A1-205ENST00000626021 PDE1AP54750 535 aa5□□□□□ -1.61
PTP4A1-205ENST00000626021 PAXIP1Q6ZW49 1069 aaPredicted RBP5□□□□□ -1.61
PTP4A1-205ENST00000626021 CREBRFQ8IUR6 639 aa5□□□□□ -1.61
PTP4A1-205ENST00000626021 SRCIN1Q9C0H9 1055 aa5□□□□□ -1.61
PTP4A1-205ENST00000626021 ATP6V1DQ9Y5K8 247 aa5□□□□□ -1.61
PTP4A1-205ENST00000626021 SHANK3Q9BYB0 1731 aa5□□□□□ -1.61
PTP4A1-205ENST00000626021 AOX1Q06278 1338 aa5□□□□□ -1.61
PTP4A1-205ENST00000626021 GADD45BO75293 160 aaPredicted RBP5□□□□□ -1.61
PTP4A1-205ENST00000626021 KCNA6P17658 529 aa5□□□□□ -1.61
PTP4A1-205ENST00000626021 NKX1-1Q15270 411 aaPredicted RBP5□□□□□ -1.61
PTP4A1-205ENST00000626021 EFCAB3Q8N7B9 438 aa5□□□□□ -1.61
PTP4A1-205ENST00000626021 C8orf58Q8NAV2 365 aa5□□□□□ -1.61
PTP4A1-205ENST00000626021 TTC12Q9H892 705 aaPredicted RBP5□□□□□ -1.61
PTP4A1-205ENST00000626021 STAP2Q9UGK3 403 aa5□□□□□ -1.61
PTP4A1-205ENST00000626021 SMTNL1A8MU46 457 aa4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 ANKLE2Q86XL3 938 aa4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 OTUD7AQ8TE49 926 aaPredicted RBP4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 PHACTR3Q96KR7 559 aa4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 CGNQ9P2M7 1197 aaKnown RBP4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 MORC2Q9Y6X9 1032 aaPredicted RBP4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 OVOS2A0A0G2JMS6 1433 aa4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 PAPPAQ13219 1627 aa4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 C5P01031 1676 aa4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 HRO43593 1189 aa4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 ZSCAN22P10073 491 aaPredicted RBP4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 CHMLP26374 656 aa4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 DPY19L2Q6NUT2 758 aa4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 POTEEQ6S8J3 1075 aa4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 ZNF830Q96NB3 372 aaPredicted RBP4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 KCNF1Q9H3M0 494 aa4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 CTNNA3Q9UI47 895 aa4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 DDX41Q9UJV9 622 aaKnown RBP4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 PAXBP1Q9Y5B6 917 aa4.99□□□□□ -1.61
PTP4A1-205ENST00000626021 IGSF1Q8N6C5 1336 aa4.98□□□□□ -1.61
PTP4A1-205ENST00000626021 UBR2Q8IWV8 1755 aa4.98□□□□□ -1.61
PTP4A1-205ENST00000626021 CRB1P82279 1406 aa4.98□□□□□ -1.61
PTP4A1-205ENST00000626021 CHL1O00533 1208 aa4.98□□□□□ -1.61
PTP4A1-205ENST00000626021 SMARCA5O60264 1052 aaPredicted RBP4.98□□□□□ -1.61
PTP4A1-205ENST00000626021 HCLS1P14317 486 aaPredicted RBP4.98□□□□□ -1.61
PTP4A1-205ENST00000626021 HSPA4P34932 840 aa4.98□□□□□ -1.61
PTP4A1-205ENST00000626021 EIF4A2Q14240 407 aaKnown RBP4.98□□□□□ -1.61
PTP4A1-205ENST00000626021 FAM53CQ9NYF3 392 aa4.98□□□□□ -1.61
PTP4A1-205ENST00000626021 CCDC171Q6TFL3 1326 aa4.98□□□□□ -1.61
PTP4A1-205ENST00000626021 PLEKHG2Q9H7P9 1386 aa4.98□□□□□ -1.61
PTP4A1-205ENST00000626021 PLCH1Q4KWH8 1693 aa4.98□□□□□ -1.61
PTP4A1-205ENST00000626021 CCDC66A2RUB6 948 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 STX6O43752 255 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 F13A1P00488 732 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 SLFN14P0C7P3 912 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 CCDC192P0DO97 292 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 U2AF2P26368 475 aaKnown RBP eCLIP4.97□□□□□ -1.613e-21■■■■■ 32.4
PTP4A1-205ENST00000626021 CCT4P50991 539 aaKnown RBP4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 ARSIQ5FYB1 569 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 AEBP1Q8IUX7 1158 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 TSC1Q92574 1164 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 JARID2Q92833 1246 aaPredicted RBP4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 KCTD12Q96CX2 325 aaKnown RBP4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 CHAMP1Q96JM3 812 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 TTC14Q96N46 770 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 PYCARDQ9ULZ3 195 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 MAP3K19Q56UN5 1328 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 MSH6P52701 1360 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 C1orf167Q5SNV9 1468 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 PXDNLA1KZ92 1463 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 ELL2O00472 640 aaPredicted RBP4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 AP5Z1O43299 807 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 GLI3P10071 1580 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 ATP8B2P98198 1209 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 PLCB2Q00722 1185 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms