RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 USP44Q9H0E7 712 aa20.98■□□□□ 0.95
CCNA1-203ENST00000625767 ZBTB7BO15156 539 aaPredicted RBP20.97■□□□□ 0.95
CCNA1-203ENST00000625767 NBPF7P0C2Y1 421 aaPredicted RBP20.97■□□□□ 0.95
CCNA1-203ENST00000625767 SUSD4Q5VX71 490 aa20.97■□□□□ 0.95
CCNA1-203ENST00000625767 ALDH1L1O75891 902 aa20.96■□□□□ 0.95
CCNA1-203ENST00000625767 CCDC191Q8NCU4 936 aa20.96■□□□□ 0.95
CCNA1-203ENST00000625767 CWC25Q9NXE8 425 aaPredicted RBP20.96■□□□□ 0.95
CCNA1-203ENST00000625767 TRIM28Q13263 835 aaKnown RBP20.96■□□□□ 0.95
CCNA1-203ENST00000625767 C1orf115Q9H7X2 142 aa20.96■□□□□ 0.95
CCNA1-203ENST00000625767 DDR1Q08345 913 aa20.95■□□□□ 0.94
CCNA1-203ENST00000625767 DDX19BQ9UMR2 479 aa20.95■□□□□ 0.94
CCNA1-203ENST00000625767 GRM8O00222 908 aa20.94■□□□□ 0.94
CCNA1-203ENST00000625767 TM4SF1P30408 202 aa20.94■□□□□ 0.94
CCNA1-203ENST00000625767 CCDC24Q8N4L8 307 aa20.94■□□□□ 0.94
CCNA1-203ENST00000625767 FAM89AQ96GI7 184 aa20.94■□□□□ 0.94
CCNA1-203ENST00000625767 SETDB2Q96T68 719 aa20.94■□□□□ 0.94
CCNA1-203ENST00000625767 GOLGB1Q14789 3259 aaKnown RBP20.94■□□□□ 0.94
CCNA1-203ENST00000625767 DDX60Q8IY21 1712 aaKnown RBP20.94■□□□□ 0.94
CCNA1-203ENST00000625767 RGL2O15211 777 aa20.93■□□□□ 0.94
CCNA1-203ENST00000625767 NTSR2O95665 410 aa20.93■□□□□ 0.94
CCNA1-203ENST00000625767 NEFLP07196 543 aa20.93■□□□□ 0.94
CCNA1-203ENST00000625767 UBE3BQ7Z3V4 1068 aa20.93■□□□□ 0.94
CCNA1-203ENST00000625767 NUTM1Q86Y26 1132 aa20.93■□□□□ 0.94
CCNA1-203ENST00000625767 C9orf78Q9NZ63 289 aaPredicted RBP20.93■□□□□ 0.94
CCNA1-203ENST00000625767 ZBTB7AO95365 584 aa20.93■□□□□ 0.94
CCNA1-203ENST00000625767 CASP7P55210 303 aa20.93■□□□□ 0.94
CCNA1-203ENST00000625767 SOCS7O14512 581 aa20.92■□□□□ 0.94
CCNA1-203ENST00000625767 ZBTB40Q9NUA8 1239 aa20.92■□□□□ 0.94
CCNA1-203ENST00000625767 TRMT112Q9UI30 125 aaKnown RBP20.92■□□□□ 0.94
CCNA1-203ENST00000625767 H7C1W4 665 aa20.91■□□□□ 0.94
CCNA1-203ENST00000625767 POLRMTO00411 1230 aaKnown RBP20.91■□□□□ 0.94
CCNA1-203ENST00000625767 PARP10Q53GL7 1025 aa20.91■□□□□ 0.94
CCNA1-203ENST00000625767 NLGN1Q8N2Q7 840 aa20.91■□□□□ 0.94
CCNA1-203ENST00000625767 KAZALD1Q96I82 304 aa20.91■□□□□ 0.94
CCNA1-203ENST00000625767 SUCLG2Q96I99 432 aa20.91■□□□□ 0.94
CCNA1-203ENST00000625767 CARMIL3Q8ND23 1372 aa20.91■□□□□ 0.94
CCNA1-203ENST00000625767 UTYO14607 1347 aa20.9■□□□□ 0.94
CCNA1-203ENST00000625767 MMP10P09238 476 aa20.9■□□□□ 0.94
CCNA1-203ENST00000625767 NRXN2Q9P2S2 1712 aa20.9■□□□□ 0.94
CCNA1-203ENST00000625767 ABCC12Q96J65 1359 aa20.9■□□□□ 0.94
CCNA1-203ENST00000625767 MYH3P11055 1940 aa20.9■□□□□ 0.94
CCNA1-203ENST00000625767 ERFEQ4G0M1 354 aa20.89■□□□□ 0.94
CCNA1-203ENST00000625767 EPHA10Q5JZY3 1008 aa20.89■□□□□ 0.94
CCNA1-203ENST00000625767 ZBTB38Q8NAP3 1195 aaPredicted RBP20.89■□□□□ 0.94
CCNA1-203ENST00000625767 UTP14AQ9BVJ6 771 aaKnown RBP20.89■□□□□ 0.94
CCNA1-203ENST00000625767 LRRFIP2Q9Y608 721 aaKnown RBP20.89■□□□□ 0.94
CCNA1-203ENST00000625767 TNRC6CQ9HCJ0 1690 aaKnown RBP20.89■□□□□ 0.94
CCNA1-203ENST00000625767 LAMB2P55268 1798 aa20.89■□□□□ 0.94
CCNA1-203ENST00000625767 PCCAP05165 728 aaPredicted RBP20.89■□□□□ 0.93
CCNA1-203ENST00000625767 UBTFL1P0CB47 393 aaPredicted RBP20.89■□□□□ 0.93
CCNA1-203ENST00000625767 NBPF5PQ86XG9 351 aaPredicted RBP20.89■□□□□ 0.93
CCNA1-203ENST00000625767 ATF5Q9Y2D1 282 aaPredicted RBP20.89■□□□□ 0.93
CCNA1-203ENST00000625767 SERPINB2P05120 415 aa20.88■□□□□ 0.93
CCNA1-203ENST00000625767 PPP1R42Q7Z4L9 355 aa20.88■□□□□ 0.93
CCNA1-203ENST00000625767 IBTKQ9P2D0 1353 aaPredicted RBP20.88■□□□□ 0.93
CCNA1-203ENST00000625767 ANKRD31Q8N7Z5 1873 aa20.88■□□□□ 0.93
CCNA1-203ENST00000625767 HCLS1P14317 486 aaPredicted RBP20.87■□□□□ 0.93
CCNA1-203ENST00000625767 GNAI3P08754 354 aa20.86■□□□□ 0.93
CCNA1-203ENST00000625767 PRR5LQ6MZQ0 368 aa20.86■□□□□ 0.93
CCNA1-203ENST00000625767 SLC16A10Q8TF71 515 aa20.86■□□□□ 0.93
CCNA1-203ENST00000625767 PCDHB15Q9Y5E8 787 aa20.86■□□□□ 0.93
CCNA1-203ENST00000625767 SH3TC1Q8TE82 1336 aa20.86■□□□□ 0.93
CCNA1-203ENST00000625767 IRS4O14654 1257 aaPredicted RBP20.86■□□□□ 0.93
CCNA1-203ENST00000625767 C3orf67Q6ZVT6 689 aa20.86■□□□□ 0.93
CCNA1-203ENST00000625767 BICC1Q9H694 974 aaKnown RBP20.86■□□□□ 0.93
CCNA1-203ENST00000625767 TAF1P21675 1872 aa20.85■□□□□ 0.93
CCNA1-203ENST00000625767 GNAI2P04899 355 aa20.85■□□□□ 0.93
CCNA1-203ENST00000625767 FOXO4P98177 505 aa20.84■□□□□ 0.93
CCNA1-203ENST00000625767 CNBD1Q8NA66 436 aa20.84■□□□□ 0.93
CCNA1-203ENST00000625767 PARP3Q9Y6F1 533 aa20.84■□□□□ 0.93
CCNA1-203ENST00000625767 CDHR2Q9BYE9 1310 aa20.84■□□□□ 0.93
CCNA1-203ENST00000625767 GTF2E1P29083 439 aaPredicted RBP20.83■□□□□ 0.93
CCNA1-203ENST00000625767 TPTE2Q6XPS3 522 aa20.83■□□□□ 0.93
CCNA1-203ENST00000625767 ANKRD44Q8N8A2 993 aa20.83■□□□□ 0.93
CCNA1-203ENST00000625767 CCDC85AQ96PX6 553 aaPredicted RBP20.83■□□□□ 0.93
CCNA1-203ENST00000625767 NYXQ9GZU5 481 aa20.83■□□□□ 0.93
CCNA1-203ENST00000625767 MTFR1LQ9H019 292 aa20.83■□□□□ 0.93
CCNA1-203ENST00000625767 NPHP1O15259 732 aa20.83■□□□□ 0.92
CCNA1-203ENST00000625767 GTF3C3Q9Y5Q9 886 aa20.83■□□□□ 0.92
CCNA1-203ENST00000625767 COL4A1P02462 1669 aa20.82■□□□□ 0.92
CCNA1-203ENST00000625767 SIRT2Q8IXJ6 389 aa20.82■□□□□ 0.92
CCNA1-203ENST00000625767 CEP85Q6P2H3 762 aa20.81■□□□□ 0.92
CCNA1-203ENST00000625767 PNMA6EA0A0J9YXQ4 647 aa20.8■□□□□ 0.92
CCNA1-203ENST00000625767 LMBR1LQ6UX01 489 aa20.8■□□□□ 0.92
CCNA1-203ENST00000625767 SGIP1Q9BQI5 828 aa20.8■□□□□ 0.92
CCNA1-203ENST00000625767 COL11A2P13942 1736 aaPredicted RBP20.79■□□□□ 0.92
CCNA1-203ENST00000625767 PDE8AO60658 829 aa20.79■□□□□ 0.92
CCNA1-203ENST00000625767 PTGER2P43116 358 aa20.79■□□□□ 0.92
CCNA1-203ENST00000625767 CTSWP56202 376 aa20.79■□□□□ 0.92
CCNA1-203ENST00000625767 PLA2G12BQ9BX93 195 aa20.79■□□□□ 0.92
CCNA1-203ENST00000625767 CHMP4BQ9H444 224 aaKnown RBP20.79■□□□□ 0.92
CCNA1-203ENST00000625767 SPEF2Q9C093 1822 aa20.79■□□□□ 0.92
CCNA1-203ENST00000625767 RABL6Q3YEC7 729 aaPredicted RBP20.78■□□□□ 0.92
CCNA1-203ENST00000625767 SLC10A5Q5PT55 438 aa20.78■□□□□ 0.92
CCNA1-203ENST00000625767 ST5P78524 1137 aa20.77■□□□□ 0.92
CCNA1-203ENST00000625767 FAM161AQ3B820 660 aa20.77■□□□□ 0.92
CCNA1-203ENST00000625767 TTLL11Q8NHH1 800 aa20.77■□□□□ 0.92
CCNA1-203ENST00000625767 CHMP3Q9Y3E7 222 aa20.77■□□□□ 0.92
CCNA1-203ENST00000625767 KLHDC4Q8TBB5 520 aa20.77■□□□□ 0.91
CCNA1-203ENST00000625767 GREM2Q9H772 168 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms