RNA–Protein interactions for RNA: ENST00000625410.1

LINC01943-201, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 2 BASIC

Gene LINC01943, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-201ENST00000625410 SIK1P57059 783 aa12.26□□□□□ -0.45
LINC01943-201ENST00000625410 R3HDM1Q15032 1099 aaKnown RBP12.26□□□□□ -0.45
LINC01943-201ENST00000625410 TTC22Q5TAA0 569 aa12.26□□□□□ -0.45
LINC01943-201ENST00000625410 CAMKK2Q96RR4 588 aa12.26□□□□□ -0.45
LINC01943-201ENST00000625410 OSBPL3Q9H4L5 887 aa12.26□□□□□ -0.45
LINC01943-201ENST00000625410 PA2G4Q9UQ80 394 aaKnown RBP12.26□□□□□ -0.45
LINC01943-201ENST00000625410 ANKRD36CQ5JPF3 1778 aa12.25□□□□□ -0.45
LINC01943-201ENST00000625410 STARD3NLO95772 234 aa12.25□□□□□ -0.45
LINC01943-201ENST00000625410 EIF5P55010 431 aaKnown RBP12.25□□□□□ -0.45
LINC01943-201ENST00000625410 FOXO4P98177 505 aa12.25□□□□□ -0.45
LINC01943-201ENST00000625410 NEXNQ0ZGT2 675 aa12.25□□□□□ -0.45
LINC01943-201ENST00000625410 TRIM28Q13263 835 aaKnown RBP12.25□□□□□ -0.45
LINC01943-201ENST00000625410 EZH2Q15910 746 aaKnown RBP12.25□□□□□ -0.45
LINC01943-201ENST00000625410 HLFQ16534 295 aa12.25□□□□□ -0.45
LINC01943-201ENST00000625410 FAM196AQ6ZSG2 479 aa12.25□□□□□ -0.45
LINC01943-201ENST00000625410 MAP3K15Q6ZN16 1313 aa12.25□□□□□ -0.45
LINC01943-201ENST00000625410 SBF2Q86WG5 1849 aa12.25□□□□□ -0.45
LINC01943-201ENST00000625410 PDE1AP54750 535 aa12.24□□□□□ -0.45
LINC01943-201ENST00000625410 TCIRG1Q13488 830 aa12.24□□□□□ -0.45
LINC01943-201ENST00000625410 UBE3BQ7Z3V4 1068 aa12.24□□□□□ -0.45
LINC01943-201ENST00000625410 RHPN1Q8TCX5 695 aa12.24□□□□□ -0.45
LINC01943-201ENST00000625410 LRRCC1Q9C099 1032 aa12.24□□□□□ -0.45
LINC01943-201ENST00000625410 STAP2Q9UGK3 403 aa12.24□□□□□ -0.45
LINC01943-201ENST00000625410 USP42Q9H9J4 1324 aaKnown RBP12.23□□□□□ -0.45
LINC01943-201ENST00000625410 A0A087WZG4 1122 aa12.23□□□□□ -0.45
LINC01943-201ENST00000625410 RAB11FIP3O75154 756 aa12.23□□□□□ -0.45
LINC01943-201ENST00000625410 SURF6O75683 361 aaKnown RBP12.23□□□□□ -0.45
LINC01943-201ENST00000625410 SASH1O94885 1247 aa12.23□□□□□ -0.45
LINC01943-201ENST00000625410 IL6STP40189 918 aaPredicted RBP12.23□□□□□ -0.45
LINC01943-201ENST00000625410 CRKLP46109 303 aaKnown RBP12.23□□□□□ -0.45
LINC01943-201ENST00000625410 TSHZ3Q63HK5 1081 aa12.23□□□□□ -0.45
LINC01943-201ENST00000625410 CCDC191Q8NCU4 936 aa12.23□□□□□ -0.45
LINC01943-201ENST00000625410 LINC00116Q8NCU8 138 aa12.23□□□□□ -0.45
LINC01943-201ENST00000625410 CCDC87Q9NVE4 849 aa12.23□□□□□ -0.45
LINC01943-201ENST00000625410 CWC25Q9NXE8 425 aaPredicted RBP12.23□□□□□ -0.45
LINC01943-201ENST00000625410 LY75O60449 1722 aa12.23□□□□□ -0.45
LINC01943-201ENST00000625410 UBN2Q6ZU65 1347 aa12.22□□□□□ -0.45
LINC01943-201ENST00000625410 TRIM37O94972 964 aa12.22□□□□□ -0.45
LINC01943-201ENST00000625410 GIGYF2Q6Y7W6 1299 aaKnown RBP12.22□□□□□ -0.45
LINC01943-201ENST00000625410 KLHDC4Q8TBB5 520 aa12.22□□□□□ -0.45
LINC01943-201ENST00000625410 IL1RAPL2Q9NP60 686 aa12.22□□□□□ -0.45
LINC01943-201ENST00000625410 BCORQ6W2J9 1755 aa12.22□□□□□ -0.45
LINC01943-201ENST00000625410 NUP98P52948 1817 aa12.21□□□□□ -0.45
LINC01943-201ENST00000625410 SDSP20132 328 aa12.21□□□□□ -0.45
LINC01943-201ENST00000625410 ATP6V1AP38606 617 aa12.21□□□□□ -0.45
LINC01943-201ENST00000625410 PTPN12Q05209 780 aaKnown RBP12.21□□□□□ -0.45
LINC01943-201ENST00000625410 TBC1D9Q6ZT07 1266 aa12.21□□□□□ -0.45
LINC01943-201ENST00000625410 NPM2Q86SE8 214 aaKnown RBP12.21□□□□□ -0.45
LINC01943-201ENST00000625410 PI4K2BQ8TCG2 481 aa12.21□□□□□ -0.45
LINC01943-201ENST00000625410 SMARCC1Q92922 1105 aaPredicted RBP12.21□□□□□ -0.45
LINC01943-201ENST00000625410 KIF1BPQ96EK5 621 aa12.21□□□□□ -0.45
LINC01943-201ENST00000625410 TBC1D32Q96NH3 1257 aa12.21□□□□□ -0.45
LINC01943-201ENST00000625410 RNF39Q9H2S5 420 aa12.21□□□□□ -0.45
LINC01943-201ENST00000625410 COPRSQ9NQ92 184 aa12.21□□□□□ -0.45
LINC01943-201ENST00000625410 AOX1Q06278 1338 aa12.2□□□□□ -0.46
LINC01943-201ENST00000625410 CAMTA2O94983 1202 aa12.2□□□□□ -0.46
LINC01943-201ENST00000625410 APBA3O96018 575 aa12.2□□□□□ -0.46
LINC01943-201ENST00000625410 KCNQ4P56696 695 aa12.2□□□□□ -0.46
LINC01943-201ENST00000625410 NLRP10Q86W26 655 aa12.2□□□□□ -0.46
LINC01943-201ENST00000625410 ZNF34Q8IZ26 560 aa12.2□□□□□ -0.46
LINC01943-201ENST00000625410 SYNE4Q8N205 404 aa12.2□□□□□ -0.46
LINC01943-201ENST00000625410 KAT6BQ8WYB5 2073 aa12.2□□□□□ -0.46
LINC01943-201ENST00000625410 ERVV-1B6SEH8 477 aa12.19□□□□□ -0.46
LINC01943-201ENST00000625410 PCCAP05165 728 aaPredicted RBP12.19□□□□□ -0.46
LINC01943-201ENST00000625410 MX1P20591 662 aa12.19□□□□□ -0.46
LINC01943-201ENST00000625410 KIF6Q6ZMV9 814 aa12.19□□□□□ -0.46
LINC01943-201ENST00000625410 AMIGO3Q86WK7 504 aa12.19□□□□□ -0.46
LINC01943-201ENST00000625410 DZIP3Q86Y13 1208 aaKnown RBP12.19□□□□□ -0.46
LINC01943-201ENST00000625410 NUTM1Q86Y26 1132 aa12.19□□□□□ -0.46
LINC01943-201ENST00000625410 PLA2G12BQ9BX93 195 aa12.19□□□□□ -0.46
LINC01943-201ENST00000625410 TBC1D2BQ9UPU7 963 aa12.19□□□□□ -0.46
LINC01943-201ENST00000625410 HDAC5Q9UQL6 1122 aa12.19□□□□□ -0.46
LINC01943-201ENST00000625410 ZNF330Q9Y3S2 320 aaPredicted RBP12.19□□□□□ -0.46
LINC01943-201ENST00000625410 SCN7AQ01118 1682 aa12.19□□□□□ -0.46
LINC01943-201ENST00000625410 CNTNAP4Q9C0A0 1308 aa12.18□□□□□ -0.46
LINC01943-201ENST00000625410 CDC45O75419 566 aa12.18□□□□□ -0.46
LINC01943-201ENST00000625410 LMBR1LQ6UX01 489 aa12.18□□□□□ -0.46
LINC01943-201ENST00000625410 SMIM5Q71RC9 77 aa12.18□□□□□ -0.46
LINC01943-201ENST00000625410 IPO9Q96P70 1041 aaKnown RBP12.18□□□□□ -0.46
LINC01943-201ENST00000625410 TAF1LQ8IZX4 1826 aa12.18□□□□□ -0.46
LINC01943-201ENST00000625410 CDHR2Q9BYE9 1310 aa12.17□□□□□ -0.46
LINC01943-201ENST00000625410 GPTP24298 496 aa12.17□□□□□ -0.46
LINC01943-201ENST00000625410 ANP32AP39687 249 aaKnown RBP12.17□□□□□ -0.46
LINC01943-201ENST00000625410 HSP90AB4PQ58FF6 505 aa12.17□□□□□ -0.46
LINC01943-201ENST00000625410 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
LINC01943-201ENST00000625410 ATG9AQ7Z3C6 839 aa12.17□□□□□ -0.46
LINC01943-201ENST00000625410 EAF2Q96CJ1 260 aaPredicted RBP12.17□□□□□ -0.46
LINC01943-201ENST00000625410 BCL11AQ9H165 835 aa12.17□□□□□ -0.46
LINC01943-201ENST00000625410 TLR7Q9NYK1 1049 aaKnown RBP12.17□□□□□ -0.46
LINC01943-201ENST00000625410 PODXL2Q9NZ53 605 aa12.17□□□□□ -0.46
LINC01943-201ENST00000625410 CSF1RP07333 972 aa12.16□□□□□ -0.46
LINC01943-201ENST00000625410 MFAP1P55081 439 aaKnown RBP12.16□□□□□ -0.46
LINC01943-201ENST00000625410 ZBTB38Q8NAP3 1195 aaPredicted RBP12.16□□□□□ -0.46
LINC01943-201ENST00000625410 FAM89AQ96GI7 184 aa12.16□□□□□ -0.46
LINC01943-201ENST00000625410 SIL1Q9H173 461 aa12.16□□□□□ -0.46
LINC01943-201ENST00000625410 BCL2L12Q9HB09 334 aa12.16□□□□□ -0.46
LINC01943-201ENST00000625410 COL4A1P02462 1669 aa12.16□□□□□ -0.46
LINC01943-201ENST00000625410 DDX60Q8IY21 1712 aaKnown RBP12.15□□□□□ -0.46
LINC01943-201ENST00000625410 HSP90AB3PQ58FF7 597 aa12.15□□□□□ -0.46
LINC01943-201ENST00000625410 ERC1Q8IUD2 1116 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms