RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 PTH1RQ03431 593 aa27.59■■■□□ 2.01
NKX2-3-202ENST00000622383 DDX54Q8TDD1 881 aaKnown RBP27.59■■■□□ 2.01
NKX2-3-202ENST00000622383 TTC14Q96N46 770 aa27.59■■■□□ 2.01
NKX2-3-202ENST00000622383 STRN4Q9NRL3 753 aa27.59■■■□□ 2.01
NKX2-3-202ENST00000622383 UBR2Q8IWV8 1755 aa27.58■■■□□ 2.01
NKX2-3-202ENST00000622383 KLHL40Q2TBA0 621 aa27.58■■■□□ 2.01
NKX2-3-202ENST00000622383 TTLL7Q6ZT98 887 aa27.57■■■□□ 2
NKX2-3-202ENST00000622383 LMBRD1Q9NUN5 540 aa27.57■■■□□ 2
NKX2-3-202ENST00000622383 ISY1Q9ULR0 285 aaKnown RBP27.57■■■□□ 2
NKX2-3-202ENST00000622383 A1BGP04217 495 aa27.56■■■□□ 2
NKX2-3-202ENST00000622383 BOLA2Q9H3K6 86 aa27.56■■■□□ 2
NKX2-3-202ENST00000622383 SHANK3Q9BYB0 1731 aa27.56■■■□□ 2
NKX2-3-202ENST00000622383 PAPPAQ13219 1627 aa27.55■■■□□ 2
NKX2-3-202ENST00000622383 KCNB2Q92953 911 aa27.55■■■□□ 2
NKX2-3-202ENST00000622383 DDX49Q9Y6V7 483 aaKnown RBP27.55■■■□□ 2
NKX2-3-202ENST00000622383 AFDNP55196 1824 aaKnown RBP27.55■■■□□ 2
NKX2-3-202ENST00000622383 TNS2Q63HR2 1409 aa27.55■■■□□ 2
NKX2-3-202ENST00000622383 H7C1W4 665 aa27.55■■■□□ 2
NKX2-3-202ENST00000622383 BRD1O95696 1058 aa27.55■■■□□ 2
NKX2-3-202ENST00000622383 MRE11P49959 708 aa27.55■■■□□ 2
NKX2-3-202ENST00000622383 FAM227BQ96M60 508 aa27.55■■■□□ 2
NKX2-3-202ENST00000622383 EVA1CP58658 441 aa27.54■■■□□ 2
NKX2-3-202ENST00000622383 SNRKQ9NRH2 765 aa27.54■■■□□ 2
NKX2-3-202ENST00000622383 HIP1O00291 1037 aa27.53■■■□□ 2
NKX2-3-202ENST00000622383 TFCP2Q12800 502 aa27.53■■■□□ 2
NKX2-3-202ENST00000622383 NMIQ13287 307 aaPredicted RBP27.53■■■□□ 2
NKX2-3-202ENST00000622383 GAS2L3Q86XJ1 694 aa27.53■■■□□ 2
NKX2-3-202ENST00000622383 FOXO4P98177 505 aa27.53■■■□□ 2
NKX2-3-202ENST00000622383 PANK2Q9BZ23 570 aa27.53■■■□□ 2
NKX2-3-202ENST00000622383 DBNLQ9UJU6 430 aaKnown RBP27.53■■■□□ 2
NKX2-3-202ENST00000622383 TNNI3KQ59H18 835 aa27.52■■■□□ 2
NKX2-3-202ENST00000622383 GRPEL1Q9HAV7 217 aa27.52■■■□□ 2
NKX2-3-202ENST00000622383 FPGT-TNNI3KV9GXZ4 949 aa27.52■■■□□ 2
NKX2-3-202ENST00000622383 CCDC171Q6TFL3 1326 aa27.52■■■□□ 2
NKX2-3-202ENST00000622383 AK2P54819 239 aa27.51■■■□□ 2
NKX2-3-202ENST00000622383 NECTIN1Q15223 517 aa27.51■■■□□ 2
NKX2-3-202ENST00000622383 LMBR1LQ6UX01 489 aa27.51■■■□□ 2
NKX2-3-202ENST00000622383 RTN4Q9NQC3 1192 aaKnown RBP27.51■■■□□ 2
NKX2-3-202ENST00000622383 PRPF40BQ6NWY9 871 aaKnown RBP27.51■■□□□ 1.99
NKX2-3-202ENST00000622383 CHAMP1Q96JM3 812 aa27.51■■□□□ 1.99
NKX2-3-202ENST00000622383 NHSL1Q5SYE7 1610 aa27.5■■□□□ 1.99
NKX2-3-202ENST00000622383 RUFY3Q7L099 469 aa27.5■■□□□ 1.99
NKX2-3-202ENST00000622383 FOXD4L5Q5VV16 416 aaPredicted RBP27.49■■□□□ 1.99
NKX2-3-202ENST00000622383 FOXD4L4Q8WXT5 416 aaPredicted RBP27.49■■□□□ 1.99
NKX2-3-202ENST00000622383 FSD1Q9BTV5 496 aa27.49■■□□□ 1.99
NKX2-3-202ENST00000622383 CWC25Q9NXE8 425 aaPredicted RBP27.49■■□□□ 1.99
NKX2-3-202ENST00000622383 NUP188Q5SRE5 1749 aa27.49■■□□□ 1.99
NKX2-3-202ENST00000622383 A0A0D9SFI3 127 aa27.49■■□□□ 1.99
NKX2-3-202ENST00000622383 CPA1P15085 419 aa27.49■■□□□ 1.99
NKX2-3-202ENST00000622383 ATP5JP18859 108 aa27.49■■□□□ 1.99
NKX2-3-202ENST00000622383 CASTP20810 708 aaKnown RBP27.49■■□□□ 1.99
NKX2-3-202ENST00000622383 ADCK5Q3MIX3 580 aa27.49■■□□□ 1.99
NKX2-3-202ENST00000622383 MAP4K1Q92918 833 aa27.49■■□□□ 1.99
NKX2-3-202ENST00000622383 PRPF40AO75400 957 aaKnown RBP27.48■■□□□ 1.99
NKX2-3-202ENST00000622383 TM6SF1Q9BZW5 370 aa27.48■■□□□ 1.99
NKX2-3-202ENST00000622383 ZBTB3Q9H5J0 574 aa27.48■■□□□ 1.99
NKX2-3-202ENST00000622383 LIMCH1Q9UPQ0 1083 aa27.48■■□□□ 1.99
NKX2-3-202ENST00000622383 RBM8AQ9Y5S9 174 aaKnown RBP27.48■■□□□ 1.99
NKX2-3-202ENST00000622383 ZSWIM6Q9HCJ5 1215 aa27.47■■□□□ 1.99
NKX2-3-202ENST00000622383 MED23Q9ULK4 1368 aa27.46■■□□□ 1.99
NKX2-3-202ENST00000622383 EDC3Q96F86 508 aaKnown RBP27.46■■□□□ 1.99
NKX2-3-202ENST00000622383 JAKMIP1Q96N16 626 aaKnown RBP27.46■■□□□ 1.99
NKX2-3-202ENST00000622383 TOGARAM1Q9Y4F4 1720 aa27.46■■□□□ 1.99
NKX2-3-202ENST00000622383 CCDC191Q8NCU4 936 aa27.46■■□□□ 1.99
NKX2-3-202ENST00000622383 CREB3L3Q68CJ9 461 aa27.45■■□□□ 1.98
NKX2-3-202ENST00000622383 DBNDD2Q9BQY9 259 aa27.45■■□□□ 1.98
NKX2-3-202ENST00000622383 LARP6Q9BRS8 491 aaKnown RBP27.45■■□□□ 1.98
NKX2-3-202ENST00000622383 TMOD3Q9NYL9 352 aa27.45■■□□□ 1.98
NKX2-3-202ENST00000622383 VPS53Q5VIR6 699 aa27.44■■□□□ 1.98
NKX2-3-202ENST00000622383 GPT2Q8TD30 523 aa27.44■■□□□ 1.98
NKX2-3-202ENST00000622383 TJP1Q07157 1748 aa27.44■■□□□ 1.98
NKX2-3-202ENST00000622383 ATG9AQ7Z3C6 839 aa27.44■■□□□ 1.98
NKX2-3-202ENST00000622383 PDRG1Q9NUG6 133 aa27.42■■□□□ 1.98
NKX2-3-202ENST00000622383 BTG4Q9NY30 223 aa27.42■■□□□ 1.98
NKX2-3-202ENST00000622383 CHMP3Q9Y3E7 222 aa27.42■■□□□ 1.98
NKX2-3-202ENST00000622383 CYP46A1Q9Y6A2 500 aa27.42■■□□□ 1.98
NKX2-3-202ENST00000622383 ZKSCAN1P17029 563 aaPredicted RBP27.42■■□□□ 1.98
NKX2-3-202ENST00000622383 CAVIN1Q6NZI2 390 aaKnown RBP27.42■■□□□ 1.98
NKX2-3-202ENST00000622383 ZNF589Q86UQ0 364 aaPredicted RBP27.42■■□□□ 1.98
NKX2-3-202ENST00000622383 RPAP1Q9BWH6 1393 aaPredicted RBP27.42■■□□□ 1.98
NKX2-3-202ENST00000622383 JCADQ9P266 1359 aa27.42■■□□□ 1.98
NKX2-3-202ENST00000622383 SLC27A2O14975 620 aa27.41■■□□□ 1.98
NKX2-3-202ENST00000622383 LARGE1O95461 756 aa27.41■■□□□ 1.98
NKX2-3-202ENST00000622383 PIGBQ92521 554 aa27.41■■□□□ 1.98
NKX2-3-202ENST00000622383 ASAP1Q9ULH1 1129 aa27.41■■□□□ 1.98
NKX2-3-202ENST00000622383 NCLP19338 710 aaKnown RBP27.4■■□□□ 1.98
NKX2-3-202ENST00000622383 ISCA1Q9BUE6 129 aa27.4■■□□□ 1.98
NKX2-3-202ENST00000622383 NDUFB9Q9Y6M9 179 aa27.4■■□□□ 1.98
NKX2-3-202ENST00000622383 KCNJ4P48050 445 aa27.4■■□□□ 1.98
NKX2-3-202ENST00000622383 HAUS7Q99871 368 aa27.4■■□□□ 1.98
NKX2-3-202ENST00000622383 WDR33Q9C0J8 1336 aaKnown RBP27.4■■□□□ 1.98
NKX2-3-202ENST00000622383 ZNF445P59923 1031 aa27.39■■□□□ 1.98
NKX2-3-202ENST00000622383 ZSCAN23Q3MJ62 389 aa27.39■■□□□ 1.97
NKX2-3-202ENST00000622383 TAF5LO75529 589 aa27.38■■□□□ 1.97
NKX2-3-202ENST00000622383 VSIG10Q8N0Z9 540 aa27.38■■□□□ 1.97
NKX2-3-202ENST00000622383 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.38■■□□□ 1.97
NKX2-3-202ENST00000622383 RFX7Q2KHR2 1363 aa27.37■■□□□ 1.97
NKX2-3-202ENST00000622383 COL9A3Q14050 684 aaPredicted RBP27.37■■□□□ 1.97
NKX2-3-202ENST00000622383 DNAJC10Q8IXB1 793 aa27.37■■□□□ 1.97
NKX2-3-202ENST00000622383 GPR108Q9NPR9 543 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms