RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 RBM8AQ9Y5S9 174 aaKnown RBP11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 NPHP3Q7Z494 1330 aa11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 LAMB4A4D0S4 1761 aa11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 RFX7Q2KHR2 1363 aa11.54□□□□□ -0.56
IGHV3-54-201ENST00000622166 LARGE1O95461 756 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 TPM2P07951 284 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 MSNP26038 577 aaKnown RBP11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 PSMA5P28066 241 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 UBE2HP62256 183 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 XPCQ01831 940 aaPredicted RBP11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 NEXNQ0ZGT2 675 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 NMIQ13287 307 aaPredicted RBP11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 GCKRQ14397 625 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 CSPP1Q1MSJ5 1256 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 ADCK5Q3MIX3 580 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 TSGA10IPQ3SY00 556 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 CCDC183Q5T5S1 534 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 CREB3L3Q68CJ9 461 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 PRPF40BQ6NWY9 871 aaKnown RBP11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 LRP10Q7Z4F1 713 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 RIC3Q7Z5B4 369 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 PROSER2Q86WR7 435 aaPredicted RBP11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 FAM184AQ8NB25 1140 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 RAPGEF4Q8WZA2 1011 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 COPRSQ9NQ92 184 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 AFDNP55196 1824 aaKnown RBP11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 MED23Q9ULK4 1368 aa11.53□□□□□ -0.56
IGHV3-54-201ENST00000622166 PARP4Q9UKK3 1724 aaKnown RBP11.52□□□□□ -0.56
IGHV3-54-201ENST00000622166 ARFGEF2Q9Y6D5 1785 aa11.52□□□□□ -0.57
IGHV3-54-201ENST00000622166 SLC27A2O14975 620 aa11.52□□□□□ -0.57
IGHV3-54-201ENST00000622166 ZKSCAN1P17029 563 aaPredicted RBP11.52□□□□□ -0.57
IGHV3-54-201ENST00000622166 ST3GAL1Q11201 340 aa11.52□□□□□ -0.57
IGHV3-54-201ENST00000622166 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.52□□□□□ -0.57
IGHV3-54-201ENST00000622166 XAGE3Q8WTP9 111 aa11.52□□□□□ -0.57
IGHV3-54-201ENST00000622166 C19orf44Q9H6X5 657 aa11.52□□□□□ -0.57
IGHV3-54-201ENST00000622166 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.52□□□□□ -0.57
IGHV3-54-201ENST00000622166 MTMR6Q9Y217 621 aa11.52□□□□□ -0.57
IGHV3-54-201ENST00000622166 CNPY2Q9Y2B0 182 aa11.52□□□□□ -0.57
IGHV3-54-201ENST00000622166 ZKSCAN5Q9Y2L8 839 aa11.52□□□□□ -0.57
IGHV3-54-201ENST00000622166 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.52□□□□□ -0.57
IGHV3-54-201ENST00000622166 DCCP43146 1447 aa11.52□□□□□ -0.57
IGHV3-54-201ENST00000622166 MEGF6O75095 1541 aa11.51□□□□□ -0.57
IGHV3-54-201ENST00000622166 GLI3P10071 1580 aa11.51□□□□□ -0.57
IGHV3-54-201ENST00000622166 CPA1P15085 419 aa11.51□□□□□ -0.57
IGHV3-54-201ENST00000622166 ATP5JP18859 108 aa11.51□□□□□ -0.57
IGHV3-54-201ENST00000622166 GJB2P29033 226 aa11.51□□□□□ -0.57
IGHV3-54-201ENST00000622166 RFX5P48382 616 aaPredicted RBP11.51□□□□□ -0.57
IGHV3-54-201ENST00000622166 AIMP1Q12904 312 aaKnown RBP11.51□□□□□ -0.57
IGHV3-54-201ENST00000622166 RABL6Q3YEC7 729 aaPredicted RBP11.51□□□□□ -0.57
IGHV3-54-201ENST00000622166 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
IGHV3-54-201ENST00000622166 CCDC83Q8IWF9 413 aa11.51□□□□□ -0.57
IGHV3-54-201ENST00000622166 IFNL2Q8IZJ0 200 aa11.51□□□□□ -0.57
IGHV3-54-201ENST00000622166 CCDC8Q9H0W5 538 aaPredicted RBP11.51□□□□□ -0.57
IGHV3-54-201ENST00000622166 GDPD2Q9HCC8 539 aa11.51□□□□□ -0.57
IGHV3-54-201ENST00000622166 SNRPA1P09661 255 aaKnown RBP11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 SLC39A6Q13433 755 aa11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 ANKRD1Q15327 319 aa11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 ME3Q16798 604 aa11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 EPHA10Q5JZY3 1008 aa11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 RNF20Q5VTR2 975 aa11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 USPL1Q5W0Q7 1092 aa11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 COPS6Q7L5N1 327 aa11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 TICAM2Q86XR7 235 aa11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 DCAF5Q96JK2 942 aa11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 FAM227BQ96M60 508 aa11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 MYD88Q99836 296 aa11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 TLR7Q9NYK1 1049 aaKnown RBP11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 HMG20BQ9P0W2 317 aa11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 TMEM94Q12767 1356 aa11.5□□□□□ -0.57
IGHV3-54-201ENST00000622166 A0A0D9SFI3 127 aa11.49□□□□□ -0.57
IGHV3-54-201ENST00000622166 RPS6KB1P23443 525 aa11.49□□□□□ -0.57
IGHV3-54-201ENST00000622166 ZC3H6P61129 1189 aaKnown RBP11.49□□□□□ -0.57
IGHV3-54-201ENST00000622166 ANKRD13DQ6ZTN6 518 aa11.49□□□□□ -0.57
IGHV3-54-201ENST00000622166 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
IGHV3-54-201ENST00000622166 FSD1Q9BTV5 496 aa11.49□□□□□ -0.57
IGHV3-54-201ENST00000622166 NLRP2Q9NX02 1062 aa11.49□□□□□ -0.57
IGHV3-54-201ENST00000622166 TAF5LO75529 589 aa11.48□□□□□ -0.57
IGHV3-54-201ENST00000622166 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
IGHV3-54-201ENST00000622166 KCNJ4P48050 445 aa11.48□□□□□ -0.57
IGHV3-54-201ENST00000622166 CASP7P55210 303 aa11.48□□□□□ -0.57
IGHV3-54-201ENST00000622166 BLOC1S2Q6QNY1 142 aa11.48□□□□□ -0.57
IGHV3-54-201ENST00000622166 NFATC2IPQ8NCF5 419 aa11.48□□□□□ -0.57
IGHV3-54-201ENST00000622166 FMNL2Q96PY5 1086 aa11.48□□□□□ -0.57
IGHV3-54-201ENST00000622166 LARP6Q9BRS8 491 aaKnown RBP11.48□□□□□ -0.57
IGHV3-54-201ENST00000622166 FUCA2Q9BTY2 467 aa11.48□□□□□ -0.57
IGHV3-54-201ENST00000622166 BOLA2Q9H3K6 86 aa11.48□□□□□ -0.57
IGHV3-54-201ENST00000622166 TPCN1Q9ULQ1 816 aa11.48□□□□□ -0.57
IGHV3-54-201ENST00000622166 CPDO75976 1380 aa11.47□□□□□ -0.57
IGHV3-54-201ENST00000622166 ELP1O95163 1332 aa11.47□□□□□ -0.57
IGHV3-54-201ENST00000622166 MYL6BP14649 208 aa11.47□□□□□ -0.57
IGHV3-54-201ENST00000622166 PDCP20941 246 aa11.47□□□□□ -0.57
IGHV3-54-201ENST00000622166 PTPN12Q05209 780 aaKnown RBP11.47□□□□□ -0.57
IGHV3-54-201ENST00000622166 KRT32Q14532 448 aa11.47□□□□□ -0.57
IGHV3-54-201ENST00000622166 FOXD4L6Q3SYB3 417 aaPredicted RBP11.47□□□□□ -0.57
IGHV3-54-201ENST00000622166 TNNI3KQ59H18 835 aa11.47□□□□□ -0.57
IGHV3-54-201ENST00000622166 FOXD4L3Q6VB84 417 aaPredicted RBP11.47□□□□□ -0.57
IGHV3-54-201ENST00000622166 RNF214Q8ND24 703 aa11.47□□□□□ -0.57
IGHV3-54-201ENST00000622166 PLBD2Q8NHP8 589 aa11.47□□□□□ -0.57
IGHV3-54-201ENST00000622166 USP16Q9Y5T5 823 aa11.47□□□□□ -0.57
IGHV3-54-201ENST00000622166 FPGT-TNNI3KV9GXZ4 949 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms