RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 CFAP53Q96M91 514 aa20.78■□□□□ 0.92
SNHG28-203ENST00000621242 EPS15P42566 896 aa20.77■□□□□ 0.92
SNHG28-203ENST00000621242 FAM161AQ3B820 660 aa20.77■□□□□ 0.92
SNHG28-203ENST00000621242 CC2D2BQ6DHV5 1058 aa20.77■□□□□ 0.92
SNHG28-203ENST00000621242 PAXIP1Q6ZW49 1069 aaPredicted RBP20.77■□□□□ 0.92
SNHG28-203ENST00000621242 NGEFQ8N5V2 710 aa20.77■□□□□ 0.92
SNHG28-203ENST00000621242 THSD7BQ9C0I4 1608 aa20.77■□□□□ 0.92
SNHG28-203ENST00000621242 U2AF1L5P0DN76 240 aaPredicted RBP20.76■□□□□ 0.91
SNHG28-203ENST00000621242 SCNN1DP51172 638 aa20.76■□□□□ 0.91
SNHG28-203ENST00000621242 U2AF1Q01081 240 aaKnown RBP eCLIP20.76■□□□□ 0.91
SNHG28-203ENST00000621242 CAPNS2Q96L46 248 aa20.76■□□□□ 0.91
SNHG28-203ENST00000621242 NYXQ9GZU5 481 aa20.76■□□□□ 0.91
SNHG28-203ENST00000621242 MIS18AQ9NYP9 233 aa20.76■□□□□ 0.91
SNHG28-203ENST00000621242 NUDCQ9Y266 331 aa20.76■□□□□ 0.91
SNHG28-203ENST00000621242 GRM1Q13255 1194 aa20.75■□□□□ 0.91
SNHG28-203ENST00000621242 CYP4F22Q6NT55 531 aa20.75■□□□□ 0.91
SNHG28-203ENST00000621242 LARGE2Q8N3Y3 721 aa20.75■□□□□ 0.91
SNHG28-203ENST00000621242 RPGRQ92834 1020 aaKnown RBP20.75■□□□□ 0.91
SNHG28-203ENST00000621242 TAF7Q15545 349 aaPredicted RBP20.74■□□□□ 0.91
SNHG28-203ENST00000621242 SLC51AQ86UW1 340 aa20.74■□□□□ 0.91
SNHG28-203ENST00000621242 DLG5Q8TDM6 1919 aa20.73■□□□□ 0.91
SNHG28-203ENST00000621242 TRAF5O00463 557 aa20.73■□□□□ 0.91
SNHG28-203ENST00000621242 TCERG1O14776 1098 aaKnown RBP20.73■□□□□ 0.91
SNHG28-203ENST00000621242 HTATSF1O43719 755 aaKnown RBP20.73■□□□□ 0.91
SNHG28-203ENST00000621242 SLC34A2O95436 690 aa20.73■□□□□ 0.91
SNHG28-203ENST00000621242 HOXA10P31260 410 aaPredicted RBP20.73■□□□□ 0.91
SNHG28-203ENST00000621242 ECE1P42892 770 aa20.73■□□□□ 0.91
SNHG28-203ENST00000621242 CST9Q5W186 159 aa20.73■□□□□ 0.91
SNHG28-203ENST00000621242 GPR101Q96P66 508 aaPredicted RBP20.73■□□□□ 0.91
SNHG28-203ENST00000621242 BEGAINQ9BUH8 593 aa20.73■□□□□ 0.91
SNHG28-203ENST00000621242 ERVV-1B6SEH8 477 aa20.72■□□□□ 0.91
SNHG28-203ENST00000621242 GPTP24298 496 aa20.72■□□□□ 0.91
SNHG28-203ENST00000621242 USP50Q70EL3 339 aaPredicted RBP20.72■□□□□ 0.91
SNHG28-203ENST00000621242 MAP3K15Q6ZN16 1313 aa20.72■□□□□ 0.91
SNHG28-203ENST00000621242 KDM3BQ7LBC6 1761 aa20.72■□□□□ 0.91
SNHG28-203ENST00000621242 CCDC85CA6NKD9 419 aa20.71■□□□□ 0.91
SNHG28-203ENST00000621242 GRIPAP1Q4V328 841 aa20.71■□□□□ 0.91
SNHG28-203ENST00000621242 TTLL7Q6ZT98 887 aa20.71■□□□□ 0.91
SNHG28-203ENST00000621242 RRP7AQ9Y3A4 280 aaKnown RBP20.71■□□□□ 0.91
SNHG28-203ENST00000621242 PPEF1O14829 653 aaPredicted RBP20.7■□□□□ 0.9
SNHG28-203ENST00000621242 SUSD4Q5VX71 490 aa20.7■□□□□ 0.9
SNHG28-203ENST00000621242 RBM17Q96I25 401 aaKnown RBP20.7■□□□□ 0.9
SNHG28-203ENST00000621242 TSKSQ9UJT2 592 aa20.7■□□□□ 0.9
SNHG28-203ENST00000621242 TLL2Q9Y6L7 1015 aa20.7■□□□□ 0.9
SNHG28-203ENST00000621242 UBN2Q6ZU65 1347 aa20.7■□□□□ 0.9
SNHG28-203ENST00000621242 CASP8AP2Q9UKL3 1982 aa20.7■□□□□ 0.9
SNHG28-203ENST00000621242 RIC1Q4ADV7 1423 aa20.7■□□□□ 0.9
SNHG28-203ENST00000621242 AOC2O75106 756 aa20.69■□□□□ 0.9
SNHG28-203ENST00000621242 KIF6Q6ZMV9 814 aa20.69■□□□□ 0.9
SNHG28-203ENST00000621242 NIM1KQ8IY84 436 aa20.69■□□□□ 0.9
SNHG28-203ENST00000621242 CRAMP1Q96RY5 1269 aa20.69■□□□□ 0.9
SNHG28-203ENST00000621242 ZBTB3Q9H5J0 574 aa20.69■□□□□ 0.9
SNHG28-203ENST00000621242 PPIP5K2O43314 1243 aa20.68■□□□□ 0.9
SNHG28-203ENST00000621242 MYL6BP14649 208 aa20.68■□□□□ 0.9
SNHG28-203ENST00000621242 PPP2R1AP30153 589 aa20.68■□□□□ 0.9
SNHG28-203ENST00000621242 C3orf67Q6ZVT6 689 aa20.68■□□□□ 0.9
SNHG28-203ENST00000621242 IBTKQ9P2D0 1353 aaPredicted RBP20.68■□□□□ 0.9
SNHG28-203ENST00000621242 MLLT1Q03111 559 aaPredicted RBP20.67■□□□□ 0.9
SNHG28-203ENST00000621242 ADARB2Q9NS39 739 aaKnown RBP20.67■□□□□ 0.9
SNHG28-203ENST00000621242 NTSR2O95665 410 aa20.66■□□□□ 0.9
SNHG28-203ENST00000621242 MAP2K2P36507 400 aa20.66■□□□□ 0.9
SNHG28-203ENST00000621242 AOC3Q16853 763 aa20.66■□□□□ 0.9
SNHG28-203ENST00000621242 ZNF34Q8IZ26 560 aa20.66■□□□□ 0.9
SNHG28-203ENST00000621242 GPRC5DQ9NZD1 345 aa20.66■□□□□ 0.9
SNHG28-203ENST00000621242 RGS19P49795 217 aa20.65■□□□□ 0.9
SNHG28-203ENST00000621242 EIF4A1P60842 406 aaKnown RBP20.65■□□□□ 0.9
SNHG28-203ENST00000621242 CELF2O95319 508 aaKnown RBP20.64■□□□□ 0.89
SNHG28-203ENST00000621242 CXCL9Q07325 125 aa20.64■□□□□ 0.89
SNHG28-203ENST00000621242 SAPCD2Q86UD0 394 aa20.64■□□□□ 0.89
SNHG28-203ENST00000621242 PNISRQ8TF01 805 aaKnown RBP20.64■□□□□ 0.89
SNHG28-203ENST00000621242 GIGYF2Q6Y7W6 1299 aaKnown RBP20.63■□□□□ 0.89
SNHG28-203ENST00000621242 NLRP3Q96P20 1036 aa20.63■□□□□ 0.89
SNHG28-203ENST00000621242 GLIS2Q9BZE0 524 aaPredicted RBP20.63■□□□□ 0.89
SNHG28-203ENST00000621242 TMX4Q9H1E5 349 aaPredicted RBP20.63■□□□□ 0.89
SNHG28-203ENST00000621242 ZNRF3Q9ULT6 936 aa20.63■□□□□ 0.89
SNHG28-203ENST00000621242 ATP6V0A2Q9Y487 856 aa20.63■□□□□ 0.89
SNHG28-203ENST00000621242 GMPSP49915 693 aaPredicted RBP20.62■□□□□ 0.89
SNHG28-203ENST00000621242 PPP1R42Q7Z4L9 355 aa20.62■□□□□ 0.89
SNHG28-203ENST00000621242 VPS33BQ9H267 617 aa20.62■□□□□ 0.89
SNHG28-203ENST00000621242 LAMB2P55268 1798 aa20.62■□□□□ 0.89
SNHG28-203ENST00000621242 ABCC4O15439 1325 aa20.6■□□□□ 0.89
SNHG28-203ENST00000621242 SUPT20HQ8NEM7 779 aa20.6■□□□□ 0.89
SNHG28-203ENST00000621242 CFAP44Q96MT7 982 aa20.6■□□□□ 0.89
SNHG28-203ENST00000621242 THUMPD2Q9BTF0 503 aaKnown RBP20.6■□□□□ 0.89
SNHG28-203ENST00000621242 MCOLN1Q9GZU1 580 aa20.6■□□□□ 0.89
SNHG28-203ENST00000621242 ZNF408Q9H9D4 720 aa20.6■□□□□ 0.89
SNHG28-203ENST00000621242 PGAP2Q9UHJ9 254 aa20.6■□□□□ 0.89
SNHG28-203ENST00000621242 TAF1P21675 1872 aa20.6■□□□□ 0.89
SNHG28-203ENST00000621242 CA12O43570 354 aa20.59■□□□□ 0.89
SNHG28-203ENST00000621242 PARP10Q53GL7 1025 aa20.59■□□□□ 0.89
SNHG28-203ENST00000621242 SLC10A5Q5PT55 438 aa20.59■□□□□ 0.89
SNHG28-203ENST00000621242 HHIPL1Q96JK4 782 aa20.59■□□□□ 0.89
SNHG28-203ENST00000621242 RTFDC1Q9BY42 306 aaPredicted RBP20.59■□□□□ 0.89
SNHG28-203ENST00000621242 TNRC18O15417 2968 aaPredicted RBP20.59■□□□□ 0.89
SNHG28-203ENST00000621242 POLR2AP24928 1970 aaKnown RBP20.59■□□□□ 0.89
SNHG28-203ENST00000621242 ANKRD36CQ5JPF3 1778 aa20.59■□□□□ 0.89
SNHG28-203ENST00000621242 NEFMP07197 916 aa20.58■□□□□ 0.89
SNHG28-203ENST00000621242 HIRAP54198 1017 aaPredicted RBP20.58■□□□□ 0.89
SNHG28-203ENST00000621242 BRPF1P55201 1214 aaPredicted RBP20.58■□□□□ 0.89
SNHG28-203ENST00000621242 CIAPIN1Q6FI81 312 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms