RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 DDX11Q96FC9 970 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 PPP1R9BQ96SB3 815 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 REREQ9P2R6 1566 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 TTC21AQ8NDW8 1320 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 A0A087WZG4 1122 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 DTNBO60941 627 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 ITSN1Q15811 1721 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 IL17REQ8NFR9 667 aa9.8□□□□□ -0.84
PTPDC1-204ENST00000620992 MBD3O95983 291 aa9.79□□□□□ -0.84
PTPDC1-204ENST00000620992 FERMT3Q86UX7 667 aa9.79□□□□□ -0.84
PTPDC1-204ENST00000620992 USP44Q9H0E7 712 aa9.79□□□□□ -0.84
PTPDC1-204ENST00000620992 GNL3LQ9NVN8 582 aaKnown RBP9.79□□□□□ -0.84
PTPDC1-204ENST00000620992 R3HCC1Q9Y3T6 440 aaKnown RBP9.79□□□□□ -0.84
PTPDC1-204ENST00000620992 MPHOSPH10O00566 681 aaKnown RBP9.79□□□□□ -0.84
PTPDC1-204ENST00000620992 SART3Q15020 963 aaKnown RBP9.79□□□□□ -0.84
PTPDC1-204ENST00000620992 UBE3BQ7Z3V4 1068 aa9.79□□□□□ -0.84
PTPDC1-204ENST00000620992 HOXC9P31274 260 aa9.79□□□□□ -0.84
PTPDC1-204ENST00000620992 LRSAM1Q6UWE0 723 aa9.79□□□□□ -0.84
PTPDC1-204ENST00000620992 CCDC73Q6ZRK6 1079 aa9.79□□□□□ -0.84
PTPDC1-204ENST00000620992 NAP1L1P55209 391 aaKnown RBP9.78□□□□□ -0.84
PTPDC1-204ENST00000620992 IGSF1Q8N6C5 1336 aa9.78□□□□□ -0.84
PTPDC1-204ENST00000620992 IBTKQ9P2D0 1353 aaPredicted RBP9.78□□□□□ -0.84
PTPDC1-204ENST00000620992 TECPR2O15040 1411 aa9.78□□□□□ -0.84
PTPDC1-204ENST00000620992 IGHMBP2P38935 993 aaKnown RBP9.78□□□□□ -0.84
PTPDC1-204ENST00000620992 TTLL12Q14166 644 aaPredicted RBP9.78□□□□□ -0.84
PTPDC1-204ENST00000620992 RAB11FIP4Q86YS3 637 aa9.78□□□□□ -0.84
PTPDC1-204ENST00000620992 AGLP35573 1532 aa9.78□□□□□ -0.84
PTPDC1-204ENST00000620992 NRXN3Q9Y4C0 1643 aa9.78□□□□□ -0.84
PTPDC1-204ENST00000620992 CADPS2Q86UW7 1296 aa9.78□□□□□ -0.84
PTPDC1-204ENST00000620992 RHPN1Q8TCX5 695 aa9.78□□□□□ -0.84
PTPDC1-204ENST00000620992 MON2Q7Z3U7 1717 aa9.78□□□□□ -0.84
PTPDC1-204ENST00000620992 C3P01024 1663 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 SOS1Q07889 1333 aaPredicted RBP9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 PI4KAP2A4QPH2 592 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 BRD1O95696 1058 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 NBPF7P0C2Y1 421 aaPredicted RBP9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 PI4KAP1Q8N8J0 262 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 IL25Q9H293 177 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 ADAMTS13Q76LX8 1427 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 USP31Q70CQ4 1352 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 HOMER1Q86YM7 354 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 ANKRD24Q8TF21 1146 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 UBE2Q2Q8WVN8 375 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 TSPY26PQ9H489 355 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 CHPF2Q9P2E5 772 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 JAG2Q9Y219 1238 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 SETD1AO15047 1707 aaKnown RBP9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 MAP3K5Q99683 1374 aa9.77□□□□□ -0.85
PTPDC1-204ENST00000620992 F8W031 263 aaPredicted RBP9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 ANAPC15P60006 121 aa9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 CCDC24Q8N4L8 307 aa9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 PAF1Q8N7H5 531 aa9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 PDILTQ8N807 584 aa9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 RIMS1Q86UR5 1692 aaKnown RBP9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 CPA1P15085 419 aa9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 DHX8Q14562 1220 aaKnown RBP9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 WDR33Q9C0J8 1336 aaKnown RBP9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 GADD45BO75293 160 aaPredicted RBP9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 OFD1O75665 1012 aa9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 KIF1BPQ96EK5 621 aa9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 RBM10P98175 930 aaKnown RBP9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 LGR6Q9HBX8 967 aa9.76□□□□□ -0.85
PTPDC1-204ENST00000620992 CEP170BQ9Y4F5 1589 aaPredicted RBP9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 KCNA6P17658 529 aa9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 GUCY1B3Q02153 619 aa9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 USP48Q86UV5 1035 aa9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 IPO7O95373 1038 aaKnown RBP9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 KRT18P05783 430 aaKnown RBP9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 SASS6Q6UVJ0 657 aa9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 DNAAF4Q8WXU2 420 aa9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 JAKMIP1Q96N16 626 aaKnown RBP9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 KCNQ3O43525 872 aa9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 RAB11FIP3O75154 756 aa9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 TPM2P07951 284 aa9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 CASTP20810 708 aaKnown RBP9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 INTS4Q96HW7 963 aaKnown RBP9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 DIP2BQ9P265 1576 aa9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 STAP2Q9UGK3 403 aa9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 SALL3Q9BXA9 1300 aa9.75□□□□□ -0.85
PTPDC1-204ENST00000620992 CUL4AQ13619 759 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 LDHAL6AQ6ZMR3 332 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 SSH3Q8TE77 659 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 NACAP1Q9BZK3 213 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 PEAK1Q9H792 1746 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 SETD1BQ9UPS6 1966 aaKnown RBP9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 TOM1O60784 492 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 TPM1P09493 284 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 IFIT5Q13325 482 aaKnown RBP9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 CT47A1Q5JQC4 288 aaPredicted RBP9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 CCDC47Q96A33 483 aaKnown RBP9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 AIDAQ96BJ3 306 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 FAM13BQ9NYF5 915 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 CNPY2Q9Y2B0 182 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 KDRP35968 1356 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 PLEKHG1Q9ULL1 1385 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 AKAP12Q02952 1782 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 RRP9O43818 475 aaKnown RBP9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 HAND2P61296 217 aa9.74□□□□□ -0.85
PTPDC1-204ENST00000620992 HELBQ8NG08 1087 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms