RNA–Protein interactions for RNA: ENST00000620535.4

NOP2-223, Transcript of NOP2 nucleolar protein, human

TSL 1 (best) BASIC

Gene NOP2, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP2-223	ENST00000620535	CCDC171	Q6TFL3	1326 aa		13.83	□□□□□ -0.2
NOP2-223	ENST00000620535	OFD1	O75665	1012 aa		13.83	□□□□□ -0.2
NOP2-223	ENST00000620535	PTMA	P06454	111 aa	Known RBP	13.83	□□□□□ -0.2
NOP2-223	ENST00000620535	HCLS1	P14317	486 aa	Predicted RBP	13.83	□□□□□ -0.2
NOP2-223	ENST00000620535	COPS6	Q7L5N1	327 aa		13.83	□□□□□ -0.2
NOP2-223	ENST00000620535	ERC1	Q8IUD2	1116 aa		13.83	□□□□□ -0.2
NOP2-223	ENST00000620535	ZSWIM6	Q9HCJ5	1215 aa		13.83	□□□□□ -0.2
NOP2-223	ENST00000620535	HEG1	Q9ULI3	1381 aa		13.82	□□□□□ -0.2
NOP2-223	ENST00000620535	DDX58	O95786	925 aa	Known RBP	13.82	□□□□□ -0.2
NOP2-223	ENST00000620535	ZNF790	Q6PG37	636 aa		13.82	□□□□□ -0.2
NOP2-223	ENST00000620535	ZNF830	Q96NB3	372 aa	Predicted RBP	13.82	□□□□□ -0.2
NOP2-223	ENST00000620535	ZKSCAN1	P17029	563 aa	Predicted RBP	13.82	□□□□□ -0.2
NOP2-223	ENST00000620535	VPS53	Q5VIR6	699 aa		13.82	□□□□□ -0.2
NOP2-223	ENST00000620535	CABLES1	Q8TDN4	633 aa		13.82	□□□□□ -0.2
NOP2-223	ENST00000620535	USP25	Q9UHP3	1055 aa		13.82	□□□□□ -0.2
NOP2-223	ENST00000620535	MTMR6	Q9Y217	621 aa		13.82	□□□□□ -0.2
NOP2-223	ENST00000620535	ZKSCAN5	Q9Y2L8	839 aa		13.82	□□□□□ -0.2
NOP2-223	ENST00000620535	GIMAP6	Q6P9H5	292 aa		13.81	□□□□□ -0.2
NOP2-223	ENST00000620535	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.81	□□□□□ -0.2
NOP2-223	ENST00000620535	USP16	Q9Y5T5	823 aa		13.81	□□□□□ -0.2
NOP2-223	ENST00000620535	ATP5J2-PTCD1	G3V325	749 aa		13.81	□□□□□ -0.2
NOP2-223	ENST00000620535	PTCD1	O75127	700 aa	Known RBP	13.81	□□□□□ -0.2
NOP2-223	ENST00000620535	PLCB2	Q00722	1185 aa		13.81	□□□□□ -0.2
NOP2-223	ENST00000620535	STK3	Q13188	491 aa		13.81	□□□□□ -0.2
NOP2-223	ENST00000620535	ZNF496	Q96IT1	587 aa	Predicted RBP	13.81	□□□□□ -0.2
NOP2-223	ENST00000620535	RGPD5	Q99666	1765 aa		13.81	□□□□□ -0.2
NOP2-223	ENST00000620535	NEURL1B	A8MQ27	555 aa		13.8	□□□□□ -0.2
NOP2-223	ENST00000620535	SLC27A2	O14975	620 aa		13.8	□□□□□ -0.2
NOP2-223	ENST00000620535	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.8	□□□□□ -0.2
NOP2-223	ENST00000620535	HS1BP3	Q53T59	392 aa		13.8	□□□□□ -0.2
NOP2-223	ENST00000620535	RAPGEF4	Q8WZA2	1011 aa		13.8	□□□□□ -0.2
NOP2-223	ENST00000620535	CCDC183	Q5T5S1	534 aa		13.8	□□□□□ -0.2
NOP2-223	ENST00000620535	MAP4K1	Q92918	833 aa		13.8	□□□□□ -0.2
NOP2-223	ENST00000620535	ERBB3	P21860	1342 aa		13.79	□□□□□ -0.2
NOP2-223	ENST00000620535	PHF14	O94880	888 aa		13.79	□□□□□ -0.2
NOP2-223	ENST00000620535	UBE2H	P62256	183 aa		13.79	□□□□□ -0.2
NOP2-223	ENST00000620535	GCKR	Q14397	625 aa		13.79	□□□□□ -0.2
NOP2-223	ENST00000620535	CCDC39	Q9UFE4	941 aa		13.79	□□□□□ -0.2
NOP2-223	ENST00000620535	NEXN	Q0ZGT2	675 aa		13.79	□□□□□ -0.2
NOP2-223	ENST00000620535	CHRNA2	Q15822	529 aa		13.79	□□□□□ -0.2
NOP2-223	ENST00000620535	PROSER2	Q86WR7	435 aa	Predicted RBP	13.79	□□□□□ -0.2
NOP2-223	ENST00000620535	TMEM87A	Q8NBN3	555 aa		13.79	□□□□□ -0.2
NOP2-223	ENST00000620535	CRYBG1	Q9Y4K1	1723 aa		13.79	□□□□□ -0.2
NOP2-223	ENST00000620535	LARP1	Q6PKG0	1096 aa	Known RBP	13.78	□□□□□ -0.2
NOP2-223	ENST00000620535	SLC52A2	Q9HAB3	445 aa		13.78	□□□□□ -0.2
NOP2-223	ENST00000620535	ZNF500	O60304	480 aa	Predicted RBP	13.78	□□□□□ -0.2
NOP2-223	ENST00000620535	CSB-PGBD3	P0DP91	1061 aa		13.78	□□□□□ -0.2
NOP2-223	ENST00000620535	RBM10	P98175	930 aa	Known RBP	13.78	□□□□□ -0.2
NOP2-223	ENST00000620535	LARP1B	Q659C4	914 aa	Known RBP	13.78	□□□□□ -0.2
NOP2-223	ENST00000620535	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.78	□□□□□ -0.2
NOP2-223	ENST00000620535	CCDC129	Q6ZRS4	1044 aa		13.78	□□□□□ -0.2
NOP2-223	ENST00000620535	CDC37L1	Q7L3B6	337 aa		13.78	□□□□□ -0.2
NOP2-223	ENST00000620535	UBE3B	Q7Z3V4	1068 aa		13.78	□□□□□ -0.2
NOP2-223	ENST00000620535	NCAPD2	Q15021	1401 aa		13.78	□□□□□ -0.2
NOP2-223	ENST00000620535	SEC62	Q99442	399 aa	Known RBP	13.77	□□□□□ -0.2
NOP2-223	ENST00000620535	TM6SF1	Q9BZW5	370 aa		13.77	□□□□□ -0.2
NOP2-223	ENST00000620535	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.77	□□□□□ -0.2
NOP2-223	ENST00000620535	UTY	O14607	1347 aa		13.77	□□□□□ -0.2
NOP2-223	ENST00000620535	NPHP3	Q7Z494	1330 aa		13.77	□□□□□ -0.2
NOP2-223	ENST00000620535	TFCP2	Q12800	502 aa		13.77	□□□□□ -0.21
NOP2-223	ENST00000620535	SLFNL1	Q499Z3	407 aa		13.77	□□□□□ -0.21
NOP2-223	ENST00000620535	ANKRD13D	Q6ZTN6	518 aa		13.77	□□□□□ -0.21
NOP2-223	ENST00000620535	DNAJC2	Q99543	621 aa	Known RBP	13.77	□□□□□ -0.21
NOP2-223	ENST00000620535	DBNL	Q9UJU6	430 aa	Known RBP	13.77	□□□□□ -0.21
NOP2-223	ENST00000620535	HDAC5	Q9UQL6	1122 aa		13.77	□□□□□ -0.21
NOP2-223	ENST00000620535	PHKG2	P15735	406 aa		13.77	□□□□□ -0.21
NOP2-223	ENST00000620535	BLOC1S2	Q6QNY1	142 aa		13.77	□□□□□ -0.21
NOP2-223	ENST00000620535	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.77	□□□□□ -0.21
NOP2-223	ENST00000620535	KCNB2	Q92953	911 aa		13.77	□□□□□ -0.21
NOP2-223	ENST00000620535	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.77	□□□□□ -0.21
NOP2-223	ENST00000620535	KDM6A	O15550	1401 aa	Predicted RBP	13.76	□□□□□ -0.21
NOP2-223	ENST00000620535	PKNOX2	Q96KN3	472 aa		13.76	□□□□□ -0.21
NOP2-223	ENST00000620535	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.76	□□□□□ -0.21
NOP2-223	ENST00000620535	TFIP11	Q9UBB9	837 aa	Known RBP	13.76	□□□□□ -0.21
NOP2-223	ENST00000620535	ATP6V1D	Q9Y5K8	247 aa		13.76	□□□□□ -0.21
NOP2-223	ENST00000620535	ADCY5	O95622	1261 aa		13.76	□□□□□ -0.21
NOP2-223	ENST00000620535	CAMK4	Q16566	473 aa		13.76	□□□□□ -0.21
NOP2-223	ENST00000620535	METTL22	Q9BUU2	404 aa	Predicted RBP	13.76	□□□□□ -0.21
NOP2-223	ENST00000620535	TTC12	Q9H892	705 aa	Predicted RBP	13.76	□□□□□ -0.21
NOP2-223	ENST00000620535	TPM2	P07951	284 aa		13.75	□□□□□ -0.21
NOP2-223	ENST00000620535	LRRC2	Q9BYS8	371 aa		13.75	□□□□□ -0.21
NOP2-223	ENST00000620535	COL15A1	P39059	1388 aa		13.75	□□□□□ -0.21
NOP2-223	ENST00000620535	TAT	P17735	454 aa	Predicted RBP	13.75	□□□□□ -0.21
NOP2-223	ENST00000620535	PTPN12	Q05209	780 aa	Known RBP	13.75	□□□□□ -0.21
NOP2-223	ENST00000620535	TOB2	Q14106	344 aa	Predicted RBP	13.75	□□□□□ -0.21
NOP2-223	ENST00000620535	DDX46	Q7L014	1031 aa	Known RBP	13.75	□□□□□ -0.21
NOP2-223	ENST00000620535	TTC6	Q86TZ1	520 aa		13.75	□□□□□ -0.21
NOP2-223	ENST00000620535	DBNDD2	Q9BQY9	259 aa		13.75	□□□□□ -0.21
NOP2-223	ENST00000620535	NPHP4	O75161	1426 aa	Predicted RBP	13.74	□□□□□ -0.21
NOP2-223	ENST00000620535	TTC5	Q8N0Z6	440 aa		13.74	□□□□□ -0.21
NOP2-223	ENST00000620535	SLIT3	O75094	1523 aa		13.74	□□□□□ -0.21
NOP2-223	ENST00000620535	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.74	□□□□□ -0.21
NOP2-223	ENST00000620535		A0A087WZG4	1122 aa		13.74	□□□□□ -0.21
NOP2-223	ENST00000620535	HIP1	O00291	1037 aa		13.74	□□□□□ -0.21
NOP2-223	ENST00000620535	CYP27B1	O15528	508 aa		13.74	□□□□□ -0.21
NOP2-223	ENST00000620535	PPFIA3	O75145	1194 aa		13.74	□□□□□ -0.21
NOP2-223	ENST00000620535	TAF5L	O75529	589 aa		13.74	□□□□□ -0.21
NOP2-223	ENST00000620535	RPS6KB1	P23443	525 aa		13.74	□□□□□ -0.21
NOP2-223	ENST00000620535	TNNI3K	Q59H18	835 aa		13.74	□□□□□ -0.21
NOP2-223	ENST00000620535	FPGT-TNNI3K	V9GXZ4	949 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms