RNA–Protein interactions for RNA: ENST00000620364.4

COL19A1-205, Transcript of collagen type XIX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL19A1, Length 6,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-205ENST00000620364 CCDC178Q5BJE1 867 aa14.29□□□□□ -0.12
COL19A1-205ENST00000620364 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
COL19A1-205ENST00000620364 ZNF608Q9ULD9 1512 aaPredicted RBP14.29□□□□□ -0.12
COL19A1-205ENST00000620364 PPP4R3BQ5MIZ7 849 aa14.29□□□□□ -0.12
COL19A1-205ENST00000620364 CTNNBL1Q8WYA6 563 aaPredicted RBP14.29□□□□□ -0.12
COL19A1-205ENST00000620364 RBM26Q5T8P6 1007 aaKnown RBP14.29□□□□□ -0.12
COL19A1-205ENST00000620364 SIRT1Q96EB6 747 aa14.29□□□□□ -0.12
COL19A1-205ENST00000620364 SLC4A4Q9Y6R1 1079 aa14.29□□□□□ -0.12
COL19A1-205ENST00000620364 EIF3JO75822 258 aaKnown RBP14.28□□□□□ -0.12
COL19A1-205ENST00000620364 CKAP2LQ8IYA6 745 aa14.28□□□□□ -0.12
COL19A1-205ENST00000620364 SLC26A6Q9BXS9 759 aa14.28□□□□□ -0.12
COL19A1-205ENST00000620364 USP16Q9Y5T5 823 aa14.28□□□□□ -0.12
COL19A1-205ENST00000620364 XAGE3Q8WTP9 111 aa14.28□□□□□ -0.12
COL19A1-205ENST00000620364 SCAND2PQ9GZW5 306 aaPredicted RBP14.28□□□□□ -0.12
COL19A1-205ENST00000620364 DZIP3Q86Y13 1208 aaKnown RBP14.28□□□□□ -0.12
COL19A1-205ENST00000620364 CABLES1Q8TDN4 633 aa14.28□□□□□ -0.12
COL19A1-205ENST00000620364 LIMCH1Q9UPQ0 1083 aa14.28□□□□□ -0.12
COL19A1-205ENST00000620364 ANXA1P04083 346 aa14.28□□□□□ -0.12
COL19A1-205ENST00000620364 AKAP4Q5JQC9 854 aa14.28□□□□□ -0.12
COL19A1-205ENST00000620364 SLC39A6Q13433 755 aa14.27□□□□□ -0.12
COL19A1-205ENST00000620364 PLS1Q14651 629 aa14.27□□□□□ -0.12
COL19A1-205ENST00000620364 CCDC40Q4G0X9 1142 aa14.27□□□□□ -0.12
COL19A1-205ENST00000620364 RAB11FIP4Q86YS3 637 aa14.27□□□□□ -0.12
COL19A1-205ENST00000620364 LMOD1P29536 600 aaPredicted RBP14.27□□□□□ -0.12
COL19A1-205ENST00000620364 MICU3Q86XE3 530 aa14.27□□□□□ -0.12
COL19A1-205ENST00000620364 NUP88Q99567 741 aaPredicted RBP14.27□□□□□ -0.12
COL19A1-205ENST00000620364 JDP2Q8WYK2 163 aa14.27□□□□□ -0.13
COL19A1-205ENST00000620364 GRPEL1Q9HAV7 217 aa14.27□□□□□ -0.13
COL19A1-205ENST00000620364 KRT23Q9C075 422 aa14.27□□□□□ -0.13
COL19A1-205ENST00000620364 PUF60Q9UHX1 559 aaKnown RBP14.27□□□□□ -0.13
COL19A1-205ENST00000620364 IQSEC3Q9UPP2 1182 aaPredicted RBP14.27□□□□□ -0.13
COL19A1-205ENST00000620364 PRKCSHP14314 528 aaPredicted RBP14.27□□□□□ -0.13
COL19A1-205ENST00000620364 CCDC91Q7Z6B0 441 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 USP8P40818 1118 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 MTIF2P46199 727 aaKnown RBP14.26□□□□□ -0.13
COL19A1-205ENST00000620364 IFIT1BQ5T764 474 aaKnown RBP14.26□□□□□ -0.13
COL19A1-205ENST00000620364 TAF3Q5VWG9 929 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 TCERG1LQ5VWI1 586 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 LARP6Q9BRS8 491 aaKnown RBP14.26□□□□□ -0.13
COL19A1-205ENST00000620364 LRRC27Q9C0I9 530 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 RAPGEF6Q8TEU7 1601 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 TBCAO75347 108 aaKnown RBP14.26□□□□□ -0.13
COL19A1-205ENST00000620364 KIAA0754O94854 1291 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 CTNNA2P26232 953 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 STX8Q9UNK0 236 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 GOLGA6L7A0A1B0GV03 622 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 SYCE3A1L190 88 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 WTAPQ15007 396 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 TDRD12Q587J7 1177 aaKnown RBP14.26□□□□□ -0.13
COL19A1-205ENST00000620364 MTERF4Q7Z6M4 381 aaKnown RBP14.26□□□□□ -0.13
COL19A1-205ENST00000620364 TRIM27P14373 513 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 NEK1Q96PY6 1258 aa14.26□□□□□ -0.13
COL19A1-205ENST00000620364 DISP3Q9P2K9 1392 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 RIMBP2O15034 1052 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 TNNT1P13805 278 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 NAA16Q6N069 864 aaPredicted RBP14.25□□□□□ -0.13
COL19A1-205ENST00000620364 RBM17Q96I25 401 aaKnown RBP14.25□□□□□ -0.13
COL19A1-205ENST00000620364 IDEP14735 1019 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 GJB2P29033 226 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 COPS6Q7L5N1 327 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 ERMNQ8TAM6 284 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 PRC1O43663 620 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 CASQ1P31415 396 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 ATP2B3Q16720 1220 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 PYM1Q9BRP8 204 aaKnown RBP14.25□□□□□ -0.13
COL19A1-205ENST00000620364 DUOX2Q9NRD8 1548 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 TPTE2Q6XPS3 522 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 MACROD2A1Z1Q3 448 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 TOP1P11387 765 aaKnown RBP14.25□□□□□ -0.13
COL19A1-205ENST00000620364 TRAF1Q13077 416 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 CCDC183Q5T5S1 534 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 GOPCQ9HD26 462 aa14.25□□□□□ -0.13
COL19A1-205ENST00000620364 FAM114A1Q8IWE2 563 aa14.24□□□□□ -0.13
COL19A1-205ENST00000620364 LRRC59Q96AG4 307 aaKnown RBP14.24□□□□□ -0.13
COL19A1-205ENST00000620364 ECM2O94769 699 aaPredicted RBP14.24□□□□□ -0.13
COL19A1-205ENST00000620364 HEATR3Q7Z4Q2 680 aa14.24□□□□□ -0.13
COL19A1-205ENST00000620364 FSIP1Q8NA03 581 aa14.24□□□□□ -0.13
COL19A1-205ENST00000620364 MMRN2Q9H8L6 949 aa14.24□□□□□ -0.13
COL19A1-205ENST00000620364 HMG20BQ9P0W2 317 aa14.24□□□□□ -0.13
COL19A1-205ENST00000620364 A2MP01023 1474 aa14.24□□□□□ -0.13
COL19A1-205ENST00000620364 MAGEB6P1A0A0J9YX57 407 aa14.24□□□□□ -0.13
COL19A1-205ENST00000620364 YEATS4O95619 227 aa14.24□□□□□ -0.13
COL19A1-205ENST00000620364 FBLN1P23142 703 aa14.24□□□□□ -0.13
COL19A1-205ENST00000620364 HSPA2P54652 639 aa14.24□□□□□ -0.13
COL19A1-205ENST00000620364 CCDC174Q6PII3 467 aa14.23□□□□□ -0.13
COL19A1-205ENST00000620364 THOC2Q8NI27 1593 aaKnown RBP14.23□□□□□ -0.13
COL19A1-205ENST00000620364 ZSCAN12O43309 604 aa14.23□□□□□ -0.13
COL19A1-205ENST00000620364 MCM5P33992 734 aa14.23□□□□□ -0.13
COL19A1-205ENST00000620364 CTAGE5O15320 804 aa14.23□□□□□ -0.13
COL19A1-205ENST00000620364 KIF5CO60282 957 aa14.23□□□□□ -0.13
COL19A1-205ENST00000620364 EYA3Q99504 573 aa14.23□□□□□ -0.13
COL19A1-205ENST00000620364 COMMD10Q9Y6G5 202 aa14.23□□□□□ -0.13
COL19A1-205ENST00000620364 DNA2P51530 1060 aa14.23□□□□□ -0.13
COL19A1-205ENST00000620364 SMARCC2Q8TAQ2 1214 aa14.23□□□□□ -0.13
COL19A1-205ENST00000620364 PLCD4Q9BRC7 762 aa14.23□□□□□ -0.13
COL19A1-205ENST00000620364 ZNF518AQ6AHZ1 1483 aa14.23□□□□□ -0.13
COL19A1-205ENST00000620364 USO1O60763 962 aaKnown RBP14.23□□□□□ -0.13
COL19A1-205ENST00000620364 MAP3K9P80192 1104 aa14.23□□□□□ -0.13
COL19A1-205ENST00000620364 CNNM2Q9H8M5 875 aa14.23□□□□□ -0.13
COL19A1-205ENST00000620364 ORC3Q9UBD5 711 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms