RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 BRWD3Q6RI45 1802 aa21.46■■□□□ 1.03
CNOT3-209ENST00000617930 NHSQ6T4R5 1651 aa21.46■■□□□ 1.03
CNOT3-209ENST00000617930 AOX1Q06278 1338 aa21.45■■□□□ 1.02
CNOT3-209ENST00000617930 MAP4K4O95819 1239 aaPredicted RBP21.45■■□□□ 1.02
CNOT3-209ENST00000617930 CHMLP26374 656 aa21.45■■□□□ 1.02
CNOT3-209ENST00000617930 RILPL2Q969X0 211 aa21.45■■□□□ 1.02
CNOT3-209ENST00000617930 LOC102724428A0A0B4J2F2 783 aa21.44■■□□□ 1.02
CNOT3-209ENST00000617930 SIK1P57059 783 aa21.44■■□□□ 1.02
CNOT3-209ENST00000617930 ZBTB3Q9H5J0 574 aa21.44■■□□□ 1.02
CNOT3-209ENST00000617930 RREB1Q92766 1687 aa21.43■■□□□ 1.02
CNOT3-209ENST00000617930 TRIM6-TRIM34B2RNG4 842 aa21.43■■□□□ 1.02
CNOT3-209ENST00000617930 KCNQ4P56696 695 aa21.43■■□□□ 1.02
CNOT3-209ENST00000617930 HSP90AB4PQ58FF6 505 aa21.43■■□□□ 1.02
CNOT3-209ENST00000617930 ERC2O15083 957 aa21.43■■□□□ 1.02
CNOT3-209ENST00000617930 UBE3BQ7Z3V4 1068 aa21.43■■□□□ 1.02
CNOT3-209ENST00000617930 ESYT1Q9BSJ8 1104 aa21.43■■□□□ 1.02
CNOT3-209ENST00000617930 TEX13AQ9BXU3 409 aaPredicted RBP21.43■■□□□ 1.02
CNOT3-209ENST00000617930 COL5A3P25940 1745 aaPredicted RBP21.43■■□□□ 1.02
CNOT3-209ENST00000617930 USP42Q9H9J4 1324 aaKnown RBP21.42■■□□□ 1.02
CNOT3-209ENST00000617930 RFX5P48382 616 aaPredicted RBP21.42■■□□□ 1.02
CNOT3-209ENST00000617930 OS9Q13438 667 aaPredicted RBP21.42■■□□□ 1.02
CNOT3-209ENST00000617930 HDAC5Q9UQL6 1122 aa21.42■■□□□ 1.02
CNOT3-209ENST00000617930 ZNF330Q9Y3S2 320 aaPredicted RBP21.42■■□□□ 1.02
CNOT3-209ENST00000617930 STARD3NLO95772 234 aa21.41■■□□□ 1.02
CNOT3-209ENST00000617930 CASC1Q6TDU7 716 aa21.41■■□□□ 1.02
CNOT3-209ENST00000617930 A0A087WZG4 1122 aa21.41■■□□□ 1.02
CNOT3-209ENST00000617930 ATP6V1AP38606 617 aa21.41■■□□□ 1.02
CNOT3-209ENST00000617930 INTS5Q6P9B9 1019 aaKnown RBP21.41■■□□□ 1.02
CNOT3-209ENST00000617930 HSCBQ8IWL3 235 aa21.41■■□□□ 1.02
CNOT3-209ENST00000617930 DDIT3P35638 169 aa21.4■■□□□ 1.02
CNOT3-209ENST00000617930 RABL6Q3YEC7 729 aaPredicted RBP21.4■■□□□ 1.02
CNOT3-209ENST00000617930 EAF2Q96CJ1 260 aaPredicted RBP21.4■■□□□ 1.02
CNOT3-209ENST00000617930 SIL1Q9H173 461 aa21.4■■□□□ 1.02
CNOT3-209ENST00000617930 H7C1W4 665 aa21.39■■□□□ 1.01
CNOT3-209ENST00000617930 CLASRPQ8N2M8 674 aaKnown RBP21.38■■□□□ 1.01
CNOT3-209ENST00000617930 ZNF831Q5JPB2 1677 aa21.38■■□□□ 1.01
CNOT3-209ENST00000617930 COL15A1P39059 1388 aa21.38■■□□□ 1.01
CNOT3-209ENST00000617930 REC8O95072 547 aa21.38■■□□□ 1.01
CNOT3-209ENST00000617930 CRKLP46109 303 aaKnown RBP21.38■■□□□ 1.01
CNOT3-209ENST00000617930 PTPN12Q05209 780 aaKnown RBP21.38■■□□□ 1.01
CNOT3-209ENST00000617930 HLFQ16534 295 aa21.38■■□□□ 1.01
CNOT3-209ENST00000617930 TLR7Q9NYK1 1049 aaKnown RBP21.38■■□□□ 1.01
CNOT3-209ENST00000617930 FOXO4P98177 505 aa21.37■■□□□ 1.01
CNOT3-209ENST00000617930 ERC1Q8IUD2 1116 aa21.36■■□□□ 1.01
CNOT3-209ENST00000617930 LINC00116Q8NCU8 138 aa21.36■■□□□ 1.01
CNOT3-209ENST00000617930 G3BP1Q13283 466 aaKnown RBP eCLIP21.36■■□□□ 1.01
CNOT3-209ENST00000617930 AACSQ86V21 672 aa21.36■■□□□ 1.01
CNOT3-209ENST00000617930 CCDC8Q9H0W5 538 aaPredicted RBP21.36■■□□□ 1.01
CNOT3-209ENST00000617930 COPRSQ9NQ92 184 aa21.36■■□□□ 1.01
CNOT3-209ENST00000617930 TTC41PQ6P2S7 1318 aa21.36■■□□□ 1.01
CNOT3-209ENST00000617930 SMIM5Q71RC9 77 aa21.35■■□□□ 1.01
CNOT3-209ENST00000617930 RTN4Q9NQC3 1192 aaKnown RBP21.35■■□□□ 1.01
CNOT3-209ENST00000617930 BRPF3Q9ULD4 1205 aa21.35■■□□□ 1.01
CNOT3-209ENST00000617930 PALD1Q9ULE6 856 aa21.35■■□□□ 1.01
CNOT3-209ENST00000617930 EIF5BO60841 1220 aaKnown RBP21.34■■□□□ 1.01
CNOT3-209ENST00000617930 EIF5P55010 431 aaKnown RBP21.34■■□□□ 1.01
CNOT3-209ENST00000617930 SMARCC1Q92922 1105 aaPredicted RBP21.34■■□□□ 1.01
CNOT3-209ENST00000617930 ISCA1Q9BUE6 129 aa21.34■■□□□ 1.01
CNOT3-209ENST00000617930 ECHDC1Q9NTX5 307 aa21.34■■□□□ 1.01
CNOT3-209ENST00000617930 CCDC87Q9NVE4 849 aa21.34■■□□□ 1.01
CNOT3-209ENST00000617930 NUP98P52948 1817 aa21.34■■□□□ 1.01
CNOT3-209ENST00000617930 LY75O60449 1722 aa21.34■■□□□ 1.01
CNOT3-209ENST00000617930 MAP3K15Q6ZN16 1313 aa21.34■■□□□ 1.01
CNOT3-209ENST00000617930 RABEP1Q15276 862 aa21.34■■□□□ 1.01
CNOT3-209ENST00000617930 K7ELQ4 463 aaPredicted RBP21.33■■□□□ 1.01
CNOT3-209ENST00000617930 IL6STP40189 918 aaPredicted RBP21.33■■□□□ 1.01
CNOT3-209ENST00000617930 LMBR1LQ6UX01 489 aa21.33■■□□□ 1.01
CNOT3-209ENST00000617930 CWC25Q9NXE8 425 aaPredicted RBP21.33■■□□□ 1.01
CNOT3-209ENST00000617930 TBC1D2BQ9UPU7 963 aa21.33■■□□□ 1.01
CNOT3-209ENST00000617930 GLRX3O76003 335 aaKnown RBP21.33■■□□□ 1
CNOT3-209ENST00000617930 IFIT2P09913 472 aaKnown RBP21.33■■□□□ 1
CNOT3-209ENST00000617930 RGS17Q9UGC6 210 aaPredicted RBP21.33■■□□□ 1
CNOT3-209ENST00000617930 ANKRD36CQ5JPF3 1778 aa21.32■■□□□ 1
CNOT3-209ENST00000617930 TCIRG1Q13488 830 aa21.32■■□□□ 1
CNOT3-209ENST00000617930 ANO2Q9NQ90 1003 aa21.31■■□□□ 1
CNOT3-209ENST00000617930 FOXD4L1Q9NU39 408 aa21.31■■□□□ 1
CNOT3-209ENST00000617930 GIGYF2Q6Y7W6 1299 aaKnown RBP21.31■■□□□ 1
CNOT3-209ENST00000617930 CCDC191Q8NCU4 936 aa21.31■■□□□ 1
CNOT3-209ENST00000617930 ARXQ96QS3 562 aa21.31■■□□□ 1
CNOT3-209ENST00000617930 TAF1LQ8IZX4 1826 aa21.3■■□□□ 1
CNOT3-209ENST00000617930 SGSM2O43147 1006 aa21.3■■□□□ 1
CNOT3-209ENST00000617930 TFCP2Q12800 502 aa21.3■■□□□ 1
CNOT3-209ENST00000617930 AMIGO3Q86WK7 504 aa21.3■■□□□ 1
CNOT3-209ENST00000617930 CNTROBQ8N137 903 aa21.3■■□□□ 1
CNOT3-209ENST00000617930 KIF6Q6ZMV9 814 aa21.29■■□□□ 1
CNOT3-209ENST00000617930 DZIP3Q86Y13 1208 aaKnown RBP21.29■■□□□ 1
CNOT3-209ENST00000617930 CHMP5Q9NZZ3 219 aa21.29■■□□□ 1
CNOT3-209ENST00000617930 KRT27Q7Z3Y8 459 aa21.29■■□□□ 1
CNOT3-209ENST00000617930 SYNE4Q8N205 404 aa21.29■■□□□ 1
CNOT3-209ENST00000617930 GPTP24298 496 aa21.28■■□□□ 1
CNOT3-209ENST00000617930 RBM6P78332 1123 aaKnown RBP21.28■■□□□ 1
CNOT3-209ENST00000617930 UBN2Q6ZU65 1347 aa21.27■■□□□ 1
CNOT3-209ENST00000617930 ZNF772Q68DY9 489 aaPredicted RBP21.27■■□□□ 1
CNOT3-209ENST00000617930 CWC27Q6UX04 472 aaKnown RBP21.27■■□□□ 1
CNOT3-209ENST00000617930 ATG9AQ7Z3C6 839 aa21.27■■□□□ 1
CNOT3-209ENST00000617930 DBNLQ9UJU6 430 aaKnown RBP21.27■■□□□ 1
CNOT3-209ENST00000617930 CAMTA2O94983 1202 aa21.26■□□□□ 0.99
CNOT3-209ENST00000617930 IL17RAQ96F46 866 aa21.26■□□□□ 0.99
CNOT3-209ENST00000617930 LSG1Q9H089 658 aaKnown RBP21.26■□□□□ 0.99
CNOT3-209ENST00000617930 BCORQ6W2J9 1755 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms