RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 GNAI3P08754 354 aa10.15□□□□□ -0.78
TARDBP-219ENST00000617757 NBPF7P0C2Y1 421 aaPredicted RBP10.15□□□□□ -0.78
TARDBP-219ENST00000617757 USPL1Q5W0Q7 1092 aa10.15□□□□□ -0.78
TARDBP-219ENST00000617757 CLEC4GQ6UXB4 293 aa10.15□□□□□ -0.78
TARDBP-219ENST00000617757 CCDC191Q8NCU4 936 aa10.15□□□□□ -0.78
TARDBP-219ENST00000617757 UPF1Q92900 1129 aaKnown RBP eCLIP10.15□□□□□ -0.78
TARDBP-219ENST00000617757 TFCP2L1Q9NZI6 479 aa10.15□□□□□ -0.78
TARDBP-219ENST00000617757 SRP68Q9UHB9 627 aaKnown RBP10.15□□□□□ -0.78
TARDBP-219ENST00000617757 PCDHB15Q9Y5E8 787 aa10.15□□□□□ -0.78
TARDBP-219ENST00000617757 USP42Q9H9J4 1324 aaKnown RBP10.14□□□□□ -0.79
TARDBP-219ENST00000617757 GRM8O00222 908 aa10.14□□□□□ -0.79
TARDBP-219ENST00000617757 ZPR1O75312 459 aa10.14□□□□□ -0.79
TARDBP-219ENST00000617757 GPTP24298 496 aa10.14□□□□□ -0.79
TARDBP-219ENST00000617757 RFC4P35249 363 aa10.14□□□□□ -0.79
TARDBP-219ENST00000617757 SLC15A2Q16348 729 aa10.14□□□□□ -0.79
TARDBP-219ENST00000617757 NLRP10Q86W26 655 aa10.14□□□□□ -0.79
TARDBP-219ENST00000617757 C1orf115Q9H7X2 142 aa10.14□□□□□ -0.79
TARDBP-219ENST00000617757 CWC25Q9NXE8 425 aaPredicted RBP10.14□□□□□ -0.79
TARDBP-219ENST00000617757 C9orf78Q9NZ63 289 aaPredicted RBP10.14□□□□□ -0.79
TARDBP-219ENST00000617757 ZNF652Q9Y2D9 606 aa10.14□□□□□ -0.79
TARDBP-219ENST00000617757 UBN2Q6ZU65 1347 aa10.13□□□□□ -0.79
TARDBP-219ENST00000617757 GNAI2P04899 355 aa10.13□□□□□ -0.79
TARDBP-219ENST00000617757 UBTFL1P0CB47 393 aaPredicted RBP10.13□□□□□ -0.79
TARDBP-219ENST00000617757 B4GALNT3Q6L9W6 998 aa10.13□□□□□ -0.79
TARDBP-219ENST00000617757 CCDC136Q96JN2 1154 aa10.13□□□□□ -0.79
TARDBP-219ENST00000617757 ANO8Q9HCE9 1232 aaPredicted RBP10.13□□□□□ -0.79
TARDBP-219ENST00000617757 STK32BQ9NY57 414 aa10.13□□□□□ -0.79
TARDBP-219ENST00000617757 PNPLA7Q6ZV29 1317 aa10.12□□□□□ -0.79
TARDBP-219ENST00000617757 H7C1W4 665 aa10.12□□□□□ -0.79
TARDBP-219ENST00000617757 CASP7P55210 303 aa10.12□□□□□ -0.79
TARDBP-219ENST00000617757 TBC1D9BQ66K14 1250 aa10.12□□□□□ -0.79
TARDBP-219ENST00000617757 COL23A1Q86Y22 540 aaPredicted RBP10.12□□□□□ -0.79
TARDBP-219ENST00000617757 FLAD1Q8NFF5 587 aa10.12□□□□□ -0.79
TARDBP-219ENST00000617757 JARID2Q92833 1246 aaPredicted RBP10.12□□□□□ -0.79
TARDBP-219ENST00000617757 NIP7Q9Y221 180 aaKnown RBP eCLIP10.12□□□□□ -0.79
TARDBP-219ENST00000617757 LRRFIP2Q9Y608 721 aaKnown RBP10.12□□□□□ -0.79
TARDBP-219ENST00000617757 NRXN2Q9P2S2 1712 aa10.11□□□□□ -0.79
TARDBP-219ENST00000617757 PCCAP05165 728 aaPredicted RBP10.11□□□□□ -0.79
TARDBP-219ENST00000617757 GYS1P13807 737 aa10.11□□□□□ -0.79
TARDBP-219ENST00000617757 PARP10Q53GL7 1025 aa10.11□□□□□ -0.79
TARDBP-219ENST00000617757 SUSD4Q5VX71 490 aa10.11□□□□□ -0.79
TARDBP-219ENST00000617757 UBE3BQ7Z3V4 1068 aa10.11□□□□□ -0.79
TARDBP-219ENST00000617757 RPAP2Q8IXW5 612 aaPredicted RBP10.11□□□□□ -0.79
TARDBP-219ENST00000617757 ANKRD44Q8N8A2 993 aa10.11□□□□□ -0.79
TARDBP-219ENST00000617757 ZBTB38Q8NAP3 1195 aaPredicted RBP10.11□□□□□ -0.79
TARDBP-219ENST00000617757 KAZALD1Q96I82 304 aa10.11□□□□□ -0.79
TARDBP-219ENST00000617757 SUCLG2Q96I99 432 aa10.11□□□□□ -0.79
TARDBP-219ENST00000617757 HDAC5Q9UQL6 1122 aa10.11□□□□□ -0.79
TARDBP-219ENST00000617757 CDHR2Q9BYE9 1310 aa10.1□□□□□ -0.79
TARDBP-219ENST00000617757 IGHDP01880 384 aa10.1□□□□□ -0.79
TARDBP-219ENST00000617757 ATP8B2P98198 1209 aa10.1□□□□□ -0.79
TARDBP-219ENST00000617757 RTL5Q5HYW3 569 aaPredicted RBP10.1□□□□□ -0.79
TARDBP-219ENST00000617757 CEP85Q6P2H3 762 aa10.1□□□□□ -0.79
TARDBP-219ENST00000617757 PPP1R42Q7Z4L9 355 aa10.1□□□□□ -0.79
TARDBP-219ENST00000617757 SIRT2Q8IXJ6 389 aa10.1□□□□□ -0.79
TARDBP-219ENST00000617757 SETDB2Q96T68 719 aa10.1□□□□□ -0.79
TARDBP-219ENST00000617757 RWDD1Q9H446 243 aaPredicted RBP10.1□□□□□ -0.79
TARDBP-219ENST00000617757 TRMT112Q9UI30 125 aaKnown RBP10.1□□□□□ -0.79
TARDBP-219ENST00000617757 SPEF2Q9C093 1822 aa10.1□□□□□ -0.79
TARDBP-219ENST00000617757 FAM177BA6PVY3 158 aa10.09□□□□□ -0.79
TARDBP-219ENST00000617757 NTSR2O95665 410 aa10.09□□□□□ -0.79
TARDBP-219ENST00000617757 TM4SF1P30408 202 aa10.09□□□□□ -0.79
TARDBP-219ENST00000617757 HDAC1Q13547 482 aaPredicted RBP10.09□□□□□ -0.79
TARDBP-219ENST00000617757 EPHA10Q5JZY3 1008 aa10.09□□□□□ -0.79
TARDBP-219ENST00000617757 BICDL1Q6ZP65 573 aa10.09□□□□□ -0.79
TARDBP-219ENST00000617757 SYNE4Q8N205 404 aa10.09□□□□□ -0.79
TARDBP-219ENST00000617757 FAM89AQ96GI7 184 aa10.09□□□□□ -0.79
TARDBP-219ENST00000617757 UTP14AQ9BVJ6 771 aaKnown RBP10.09□□□□□ -0.79
TARDBP-219ENST00000617757 KDM2BQ8NHM5 1336 aa10.08□□□□□ -0.8
TARDBP-219ENST00000617757 SH3TC1Q8TE82 1336 aa10.08□□□□□ -0.8
TARDBP-219ENST00000617757 TAF1P21675 1872 aa10.08□□□□□ -0.8
TARDBP-219ENST00000617757 ANKRD31Q8N7Z5 1873 aa10.08□□□□□ -0.8
TARDBP-219ENST00000617757 FOXO4P98177 505 aa10.08□□□□□ -0.8
TARDBP-219ENST00000617757 MTX1Q13505 466 aa10.08□□□□□ -0.8
TARDBP-219ENST00000617757 NFIXQ14938 502 aa10.08□□□□□ -0.8
TARDBP-219ENST00000617757 PLA2G12BQ9BX93 195 aa10.08□□□□□ -0.8
TARDBP-219ENST00000617757 BICC1Q9H694 974 aaKnown RBP10.08□□□□□ -0.8
TARDBP-219ENST00000617757 TNRC6CQ9HCJ0 1690 aaKnown RBP10.08□□□□□ -0.8
TARDBP-219ENST00000617757 CARMIL3Q8ND23 1372 aa10.07□□□□□ -0.8
TARDBP-219ENST00000617757 PNMA6EA0A0J9YXQ4 647 aa10.07□□□□□ -0.8
TARDBP-219ENST00000617757 IRS4O14654 1257 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-219ENST00000617757 POLA2Q14181 598 aa10.07□□□□□ -0.8
TARDBP-219ENST00000617757 RABL6Q3YEC7 729 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-219ENST00000617757 NLGN1Q8N2Q7 840 aa10.07□□□□□ -0.8
TARDBP-219ENST00000617757 SSH3Q8TE77 659 aa10.07□□□□□ -0.8
TARDBP-219ENST00000617757 NYXQ9GZU5 481 aa10.07□□□□□ -0.8
TARDBP-219ENST00000617757 U3KPZ7 1027 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-219ENST00000617757 SRGAP3O43295 1099 aa10.06□□□□□ -0.8
TARDBP-219ENST00000617757 PDE8AO60658 829 aa10.06□□□□□ -0.8
TARDBP-219ENST00000617757 HMMRO75330 724 aa10.06□□□□□ -0.8
TARDBP-219ENST00000617757 CSF1RP07333 972 aa10.06□□□□□ -0.8
TARDBP-219ENST00000617757 ERFEQ4G0M1 354 aa10.06□□□□□ -0.8
TARDBP-219ENST00000617757 SLC10A5Q5PT55 438 aa10.06□□□□□ -0.8
TARDBP-219ENST00000617757 LMBR1LQ6UX01 489 aa10.06□□□□□ -0.8
TARDBP-219ENST00000617757 TPTE2Q6XPS3 522 aa10.06□□□□□ -0.8
TARDBP-219ENST00000617757 CENPQQ7L2Z9 268 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-219ENST00000617757 NBPF5PQ86XG9 351 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-219ENST00000617757 NUTM1Q86Y26 1132 aa10.06□□□□□ -0.8
TARDBP-219ENST00000617757 PDGFDQ9GZP0 370 aaPredicted RBP10.06□□□□□ -0.8
TARDBP-219ENST00000617757 A0A1B0GUL6 1792 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms