RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 WDR90Q96KV7 1748 aa20.82■□□□□ 0.92
SPTSSB-204ENST00000617024 F6X3S4 739 aa20.82■□□□□ 0.92
SPTSSB-204ENST00000617024 TRIM28Q13263 835 aaKnown RBP20.82■□□□□ 0.92
SPTSSB-204ENST00000617024 PPP1R42Q7Z4L9 355 aa20.82■□□□□ 0.92
SPTSSB-204ENST00000617024 ARHGAP45Q92619 1136 aa20.82■□□□□ 0.92
SPTSSB-204ENST00000617024 ISCA1Q9BUE6 129 aa20.82■□□□□ 0.92
SPTSSB-204ENST00000617024 CARMIL3Q8ND23 1372 aa20.82■□□□□ 0.92
SPTSSB-204ENST00000617024 FAM177BA6PVY3 158 aa20.81■□□□□ 0.92
SPTSSB-204ENST00000617024 NPHP1O15259 732 aa20.81■□□□□ 0.92
SPTSSB-204ENST00000617024 TPTE2Q6XPS3 522 aa20.81■□□□□ 0.92
SPTSSB-204ENST00000617024 NBPF5PQ86XG9 351 aaPredicted RBP20.81■□□□□ 0.92
SPTSSB-204ENST00000617024 FRAT1Q92837 279 aaPredicted RBP20.81■□□□□ 0.92
SPTSSB-204ENST00000617024 API5Q9BZZ5 524 aaKnown RBP20.81■□□□□ 0.92
SPTSSB-204ENST00000617024 SUSD4Q5VX71 490 aa20.8■□□□□ 0.92
SPTSSB-204ENST00000617024 SLC4A10Q6U841 1118 aa20.8■□□□□ 0.92
SPTSSB-204ENST00000617024 NLRP10Q86W26 655 aa20.8■□□□□ 0.92
SPTSSB-204ENST00000617024 NYXQ9GZU5 481 aa20.8■□□□□ 0.92
SPTSSB-204ENST00000617024 UBN2Q6ZU65 1347 aa20.79■□□□□ 0.92
SPTSSB-204ENST00000617024 TOMM70O94826 608 aa20.79■□□□□ 0.92
SPTSSB-204ENST00000617024 GTF2E1P29083 439 aaPredicted RBP20.79■□□□□ 0.92
SPTSSB-204ENST00000617024 CCDC191Q8NCU4 936 aa20.79■□□□□ 0.92
SPTSSB-204ENST00000617024 UTP14AQ9BVJ6 771 aaKnown RBP20.79■□□□□ 0.92
SPTSSB-204ENST00000617024 C10orf71Q711Q0 1435 aa20.78■□□□□ 0.92
SPTSSB-204ENST00000617024 ARFGEF2Q9Y6D5 1785 aa20.78■□□□□ 0.92
SPTSSB-204ENST00000617024 NMRK2Q9NPI5 230 aa20.78■□□□□ 0.92
SPTSSB-204ENST00000617024 A0A0G2JLW4 131 aa20.77■□□□□ 0.92
SPTSSB-204ENST00000617024 IGKV5-2P06315 115 aa20.77■□□□□ 0.92
SPTSSB-204ENST00000617024 BEND3Q5T5X7 828 aa20.77■□□□□ 0.92
SPTSSB-204ENST00000617024 ZKSCAN2Q63HK3 967 aa20.77■□□□□ 0.92
SPTSSB-204ENST00000617024 CNBD1Q8NA66 436 aa20.77■□□□□ 0.92
SPTSSB-204ENST00000617024 LINS1Q8NG48 757 aa20.77■□□□□ 0.92
SPTSSB-204ENST00000617024 CWC25Q9NXE8 425 aaPredicted RBP20.77■□□□□ 0.92
SPTSSB-204ENST00000617024 TRMT112Q9UI30 125 aaKnown RBP20.77■□□□□ 0.92
SPTSSB-204ENST00000617024 NEURL1BA8MQ27 555 aa20.76■□□□□ 0.91
SPTSSB-204ENST00000617024 ST5P78524 1137 aa20.76■□□□□ 0.91
SPTSSB-204ENST00000617024 CWF19L2Q2TBE0 894 aaKnown RBP20.76■□□□□ 0.91
SPTSSB-204ENST00000617024 PRR5LQ6MZQ0 368 aa20.76■□□□□ 0.91
SPTSSB-204ENST00000617024 ATF7IPQ6VMQ6 1270 aa20.76■□□□□ 0.91
SPTSSB-204ENST00000617024 BCS1LQ9Y276 419 aa20.76■□□□□ 0.91
SPTSSB-204ENST00000617024 ARFGEF1Q9Y6D6 1849 aa20.76■□□□□ 0.91
SPTSSB-204ENST00000617024 NTSR2O95665 410 aa20.75■□□□□ 0.91
SPTSSB-204ENST00000617024 SRCIN1Q9C0H9 1055 aa20.75■□□□□ 0.91
SPTSSB-204ENST00000617024 ANKRD36CQ5JPF3 1778 aa20.74■□□□□ 0.91
SPTSSB-204ENST00000617024 ALDH1L1O75891 902 aa20.74■□□□□ 0.91
SPTSSB-204ENST00000617024 TGFB2P61812 414 aa20.74■□□□□ 0.91
SPTSSB-204ENST00000617024 HTRA3P83110 453 aa20.74■□□□□ 0.91
SPTSSB-204ENST00000617024 NUTM1Q86Y26 1132 aa20.74■□□□□ 0.91
SPTSSB-204ENST00000617024 CCDC24Q8N4L8 307 aa20.74■□□□□ 0.91
SPTSSB-204ENST00000617024 AFDNP55196 1824 aaKnown RBP20.74■□□□□ 0.91
SPTSSB-204ENST00000617024 IBTKQ9P2D0 1353 aaPredicted RBP20.73■□□□□ 0.91
SPTSSB-204ENST00000617024 TRIM27P14373 513 aa20.73■□□□□ 0.91
SPTSSB-204ENST00000617024 DPEP1P16444 411 aa20.73■□□□□ 0.91
SPTSSB-204ENST00000617024 GCKRQ14397 625 aa20.73■□□□□ 0.91
SPTSSB-204ENST00000617024 ERFEQ4G0M1 354 aa20.73■□□□□ 0.91
SPTSSB-204ENST00000617024 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.73■□□□□ 0.91
SPTSSB-204ENST00000617024 RNF123Q5XPI4 1314 aa20.73■□□□□ 0.91
SPTSSB-204ENST00000617024 PCCAP05165 728 aaPredicted RBP20.72■□□□□ 0.91
SPTSSB-204ENST00000617024 CCT4P50991 539 aaKnown RBP20.72■□□□□ 0.91
SPTSSB-204ENST00000617024 ARHGAP27Q6ZUM4 889 aa20.72■□□□□ 0.91
SPTSSB-204ENST00000617024 ZBTB38Q8NAP3 1195 aaPredicted RBP20.72■□□□□ 0.91
SPTSSB-204ENST00000617024 FAM89AQ96GI7 184 aa20.72■□□□□ 0.91
SPTSSB-204ENST00000617024 BRIP1Q9BX63 1249 aa20.72■□□□□ 0.91
SPTSSB-204ENST00000617024 SH3TC1Q8TE82 1336 aa20.72■□□□□ 0.91
SPTSSB-204ENST00000617024 MS4A1P11836 297 aa20.71■□□□□ 0.91
SPTSSB-204ENST00000617024 SLC10A5Q5PT55 438 aa20.71■□□□□ 0.91
SPTSSB-204ENST00000617024 SYNE4Q8N205 404 aa20.71■□□□□ 0.91
SPTSSB-204ENST00000617024 CLUAP1Q96AJ1 413 aa20.71■□□□□ 0.91
SPTSSB-204ENST00000617024 NRXN2Q9P2S2 1712 aa20.7■□□□□ 0.9
SPTSSB-204ENST00000617024 H7C1W4 665 aa20.7■□□□□ 0.9
SPTSSB-204ENST00000617024 HSP90B1P14625 803 aaKnown RBP20.7■□□□□ 0.9
SPTSSB-204ENST00000617024 KCNA3P22001 575 aa20.7■□□□□ 0.9
SPTSSB-204ENST00000617024 PDE6BP35913 854 aa20.7■□□□□ 0.9
SPTSSB-204ENST00000617024 RTL5Q5HYW3 569 aaPredicted RBP20.7■□□□□ 0.9
SPTSSB-204ENST00000617024 C9orf78Q9NZ63 289 aaPredicted RBP20.7■□□□□ 0.9
SPTSSB-204ENST00000617024 SBF1O95248 1867 aa20.69■□□□□ 0.9
SPTSSB-204ENST00000617024 PLIN1O60240 522 aa20.69■□□□□ 0.9
SPTSSB-204ENST00000617024 COL13A1Q5TAT6 717 aaPredicted RBP20.69■□□□□ 0.9
SPTSSB-204ENST00000617024 FTSJ3Q8IY81 847 aaKnown RBP20.69■□□□□ 0.9
SPTSSB-204ENST00000617024 DZIP1LQ8IYY4 767 aaKnown RBP20.69■□□□□ 0.9
SPTSSB-204ENST00000617024 RBM46Q8TBY0 533 aaKnown RBP20.69■□□□□ 0.9
SPTSSB-204ENST00000617024 JARID2Q92833 1246 aaPredicted RBP20.69■□□□□ 0.9
SPTSSB-204ENST00000617024 PDZRN3Q9UPQ7 1066 aa20.69■□□□□ 0.9
SPTSSB-204ENST00000617024 TNNQ9UQP3 1299 aa20.69■□□□□ 0.9
SPTSSB-204ENST00000617024 IRS4O14654 1257 aaPredicted RBP20.68■□□□□ 0.9
SPTSSB-204ENST00000617024 C9orf131Q5VYM1 1079 aa20.68■□□□□ 0.9
SPTSSB-204ENST00000617024 INTS3Q68E01 1043 aaKnown RBP20.68■□□□□ 0.9
SPTSSB-204ENST00000617024 NLRP3Q96P20 1036 aa20.68■□□□□ 0.9
SPTSSB-204ENST00000617024 ABCC4O15439 1325 aa20.68■□□□□ 0.9
SPTSSB-204ENST00000617024 H0YIN7 160 aa20.67■□□□□ 0.9
SPTSSB-204ENST00000617024 HCLS1P14317 486 aaPredicted RBP20.67■□□□□ 0.9
SPTSSB-204ENST00000617024 UBE3BQ7Z3V4 1068 aa20.67■□□□□ 0.9
SPTSSB-204ENST00000617024 KLRG1Q96E93 195 aa20.67■□□□□ 0.9
SPTSSB-204ENST00000617024 GRM8O00222 908 aa20.66■□□□□ 0.9
SPTSSB-204ENST00000617024 C2CD5Q86YS7 1000 aa20.66■□□□□ 0.9
SPTSSB-204ENST00000617024 JMYQ8N9B5 988 aa20.66■□□□□ 0.9
SPTSSB-204ENST00000617024 CDHR2Q9BYE9 1310 aa20.65■□□□□ 0.9
SPTSSB-204ENST00000617024 KLRG2A4D1S0 409 aaPredicted RBP20.65■□□□□ 0.9
SPTSSB-204ENST00000617024 TMEM57Q8N5G2 664 aa20.65■□□□□ 0.9
SPTSSB-204ENST00000617024 ABCC12Q96J65 1359 aa20.64■□□□□ 0.89
SPTSSB-204ENST00000617024 PDE8AO60658 829 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms