RNA–Protein interactions for RNA: ENST00000616824.1

FAM220A-206, Transcript of family with sequence similarity 220 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM220A, Length 2,211 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM220A-206ENST00000616824 USP21Q9UK80 565 aa29.53■■■□□ 2.32
FAM220A-206ENST00000616824 ZDHHC9Q9Y397 364 aa29.53■■■□□ 2.32
FAM220A-206ENST00000616824 KCPQ6ZWJ8 1503 aa29.53■■■□□ 2.32
FAM220A-206ENST00000616824 RPAP2Q8IXW5 612 aaPredicted RBP29.53■■■□□ 2.32
FAM220A-206ENST00000616824 ACSBG1Q96GR2 724 aa29.53■■■□□ 2.32
FAM220A-206ENST00000616824 A1BGP04217 495 aa29.52■■■□□ 2.32
FAM220A-206ENST00000616824 MEX3CQ5U5Q3 659 aaKnown RBP29.52■■■□□ 2.32
FAM220A-206ENST00000616824 LRP10Q7Z4F1 713 aa29.52■■■□□ 2.32
FAM220A-206ENST00000616824 GNAI3P08754 354 aa29.52■■■□□ 2.32
FAM220A-206ENST00000616824 GLI3P10071 1580 aa29.52■■■□□ 2.32
FAM220A-206ENST00000616824 VPS72Q15906 364 aa29.52■■■□□ 2.32
FAM220A-206ENST00000616824 PTMAP06454 111 aaKnown RBP29.51■■■□□ 2.31
FAM220A-206ENST00000616824 PLEKHM2Q8IWE5 1019 aa29.51■■■□□ 2.31
FAM220A-206ENST00000616824 WNK3Q9BYP7 1800 aa29.51■■■□□ 2.31
FAM220A-206ENST00000616824 PXDNLA1KZ92 1463 aa29.51■■■□□ 2.31
FAM220A-206ENST00000616824 NBPF26B4DH59 902 aa29.51■■■□□ 2.31
FAM220A-206ENST00000616824 DDX58O95786 925 aaKnown RBP29.51■■■□□ 2.31
FAM220A-206ENST00000616824 CWF19L2Q2TBE0 894 aaKnown RBP29.51■■■□□ 2.31
FAM220A-206ENST00000616824 NBPF14Q5TI25 921 aa29.51■■■□□ 2.31
FAM220A-206ENST00000616824 NBPF10Q6P3W6 841 aaKnown RBP29.51■■■□□ 2.31
FAM220A-206ENST00000616824 RIC3Q7Z5B4 369 aa29.51■■■□□ 2.31
FAM220A-206ENST00000616824 NBPF15Q8N660 670 aa29.51■■■□□ 2.31
FAM220A-206ENST00000616824 LRRFIP2Q9Y608 721 aaKnown RBP29.51■■■□□ 2.31
FAM220A-206ENST00000616824 TTC22Q5TAA0 569 aa29.5■■■□□ 2.31
FAM220A-206ENST00000616824 NBPF7P0C2Y1 421 aaPredicted RBP29.49■■■□□ 2.31
FAM220A-206ENST00000616824 SYAP1Q96A49 352 aaPredicted RBP29.49■■■□□ 2.31
FAM220A-206ENST00000616824 TSPY26PQ9H489 355 aa29.49■■■□□ 2.31
FAM220A-206ENST00000616824 UBTFL1P0CB47 393 aaPredicted RBP29.49■■■□□ 2.31
FAM220A-206ENST00000616824 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.49■■■□□ 2.31
FAM220A-206ENST00000616824 BCL9O00512 1426 aa29.48■■■□□ 2.31
FAM220A-206ENST00000616824 CASC1Q6TDU7 716 aa29.48■■■□□ 2.31
FAM220A-206ENST00000616824 PIBF1Q8WXW3 757 aa29.47■■■□□ 2.31
FAM220A-206ENST00000616824 UBR2Q8IWV8 1755 aa29.47■■■□□ 2.31
FAM220A-206ENST00000616824 PAPPAQ13219 1627 aa29.47■■■□□ 2.31
FAM220A-206ENST00000616824 KIF20AO95235 890 aa29.47■■■□□ 2.31
FAM220A-206ENST00000616824 UVSSAQ2YD98 709 aa29.47■■■□□ 2.31
FAM220A-206ENST00000616824 ZGPATQ8N5A5 531 aaKnown RBP29.47■■■□□ 2.31
FAM220A-206ENST00000616824 PRDM10Q9NQV6 1147 aa29.47■■■□□ 2.31
FAM220A-206ENST00000616824 ITGB4P16144 1822 aa29.46■■■□□ 2.31
FAM220A-206ENST00000616824 ANKRD13DQ6ZTN6 518 aa29.46■■■□□ 2.31
FAM220A-206ENST00000616824 DNAJC10Q8IXB1 793 aa29.46■■■□□ 2.31
FAM220A-206ENST00000616824 DCTPP1Q9H773 170 aa29.46■■■□□ 2.31
FAM220A-206ENST00000616824 APBB1O00213 710 aa29.45■■■□□ 2.31
FAM220A-206ENST00000616824 FAM184AQ8NB25 1140 aa29.45■■■□□ 2.31
FAM220A-206ENST00000616824 PHF14O94880 888 aa29.45■■■□□ 2.3
FAM220A-206ENST00000616824 ZHX1Q9UKY1 873 aaPredicted RBP29.45■■■□□ 2.3
FAM220A-206ENST00000616824 PNMA6EA0A0J9YXQ4 647 aa29.44■■■□□ 2.3
FAM220A-206ENST00000616824 DNTTIP2Q5QJE6 756 aaKnown RBP29.44■■■□□ 2.3
FAM220A-206ENST00000616824 SLC4A9Q96Q91 983 aa29.44■■■□□ 2.3
FAM220A-206ENST00000616824 ARID3AQ99856 593 aa29.44■■■□□ 2.3
FAM220A-206ENST00000616824 MYD88Q99836 296 aa29.43■■■□□ 2.3
FAM220A-206ENST00000616824 C9orf78Q9NZ63 289 aaPredicted RBP29.43■■■□□ 2.3
FAM220A-206ENST00000616824 REC8O95072 547 aa29.42■■■□□ 2.3
FAM220A-206ENST00000616824 IGKV5-2P06315 115 aa29.42■■■□□ 2.3
FAM220A-206ENST00000616824 LINS1Q8NG48 757 aa29.42■■■□□ 2.3
FAM220A-206ENST00000616824 NSFL1CQ9UNZ2 370 aaKnown RBP29.42■■■□□ 2.3
FAM220A-206ENST00000616824 ZNF330Q9Y3S2 320 aaPredicted RBP29.42■■■□□ 2.3
FAM220A-206ENST00000616824 TTLL7Q6ZT98 887 aa29.41■■■□□ 2.3
FAM220A-206ENST00000616824 ZNF710Q8N1W2 664 aa29.41■■■□□ 2.3
FAM220A-206ENST00000616824 ATP8B2P98198 1209 aa29.41■■■□□ 2.3
FAM220A-206ENST00000616824 RNF214Q8ND24 703 aa29.41■■■□□ 2.3
FAM220A-206ENST00000616824 KCNQ2O43526 872 aa29.4■■■□□ 2.3
FAM220A-206ENST00000616824 ALDH1L1O75891 902 aa29.4■■■□□ 2.3
FAM220A-206ENST00000616824 LETM1O95202 739 aaPredicted RBP29.4■■■□□ 2.3
FAM220A-206ENST00000616824 AFF2P51816 1311 aa29.4■■■□□ 2.3
FAM220A-206ENST00000616824 HMMRO75330 724 aa29.4■■■□□ 2.3
FAM220A-206ENST00000616824 MCM2P49736 904 aa29.4■■■□□ 2.3
FAM220A-206ENST00000616824 NOLC1Q14978 699 aaKnown RBP eCLIP29.4■■■□□ 2.3
FAM220A-206ENST00000616824 METTL22Q9BUU2 404 aaPredicted RBP29.4■■■□□ 2.3
FAM220A-206ENST00000616824 N4BP2Q86UW6 1770 aaPredicted RBP29.39■■■□□ 2.3
FAM220A-206ENST00000616824 LAMB4A4D0S4 1761 aa29.39■■■□□ 2.29
FAM220A-206ENST00000616824 BRD1O95696 1058 aa29.39■■■□□ 2.29
FAM220A-206ENST00000616824 DOT1LQ8TEK3 1739 aa29.38■■■□□ 2.29
FAM220A-206ENST00000616824 NEXNQ0ZGT2 675 aa29.38■■■□□ 2.29
FAM220A-206ENST00000616824 SPTLC3Q9NUV7 552 aa29.38■■■□□ 2.29
FAM220A-206ENST00000616824 KIF3AQ9Y496 699 aa29.38■■■□□ 2.29
FAM220A-206ENST00000616824 ATP5J2-PTCD1G3V325 749 aa29.37■■■□□ 2.29
FAM220A-206ENST00000616824 SMARCA5O60264 1052 aaPredicted RBP29.37■■■□□ 2.29
FAM220A-206ENST00000616824 EXOC6BQ9Y2D4 811 aa29.37■■■□□ 2.29
FAM220A-206ENST00000616824 FAM182BQ5T319 152 aa29.36■■■□□ 2.29
FAM220A-206ENST00000616824 NEURL1BA8MQ27 555 aa29.36■■■□□ 2.29
FAM220A-206ENST00000616824 PPP1R42Q7Z4L9 355 aa29.36■■■□□ 2.29
FAM220A-206ENST00000616824 C16orf71Q8IYS4 520 aaPredicted RBP29.36■■■□□ 2.29
FAM220A-206ENST00000616824 JARID2Q92833 1246 aaPredicted RBP29.36■■■□□ 2.29
FAM220A-206ENST00000616824 PLBD2Q8NHP8 589 aa29.35■■■□□ 2.29
FAM220A-206ENST00000616824 TEX13AQ9BXU3 409 aaPredicted RBP29.35■■■□□ 2.29
FAM220A-206ENST00000616824 ZBTB3Q9H5J0 574 aa29.35■■■□□ 2.29
FAM220A-206ENST00000616824 STARD3NLO95772 234 aa29.35■■■□□ 2.29
FAM220A-206ENST00000616824 KLHL34Q8N239 644 aa29.35■■■□□ 2.29
FAM220A-206ENST00000616824 GRM8O00222 908 aa29.34■■■□□ 2.29
FAM220A-206ENST00000616824 GJD4Q96KN9 370 aaPredicted RBP29.34■■■□□ 2.29
FAM220A-206ENST00000616824 SDSP20132 328 aa29.32■■■□□ 2.28
FAM220A-206ENST00000616824 GCKRQ14397 625 aa29.32■■■□□ 2.28
FAM220A-206ENST00000616824 SRGAP3O43295 1099 aa29.32■■■□□ 2.28
FAM220A-206ENST00000616824 CYP19A1P11511 503 aaPredicted RBP29.32■■■□□ 2.28
FAM220A-206ENST00000616824 CUL4AQ13619 759 aa29.32■■■□□ 2.28
FAM220A-206ENST00000616824 INTS4Q96HW7 963 aaKnown RBP29.32■■■□□ 2.28
FAM220A-206ENST00000616824 ERC2O15083 957 aa29.31■■■□□ 2.28
FAM220A-206ENST00000616824 PPP4R3BQ5MIZ7 849 aa29.31■■■□□ 2.28
FAM220A-206ENST00000616824 A0A0U1RQG5 324 aaPredicted RBP29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms