RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 ZSCAN16Q9H4T2 348 aaPredicted RBP12.12□□□□□ -0.47
TPT1-214ENST00000616577 TCOF1Q13428 1488 aaKnown RBP12.12□□□□□ -0.47
TPT1-214ENST00000616577 CAVIN2O95810 425 aa12.12□□□□□ -0.47
TPT1-214ENST00000616577 AK2P54819 239 aa12.12□□□□□ -0.47
TPT1-214ENST00000616577 MTHFSDQ2M296 383 aaKnown RBP12.12□□□□□ -0.47
TPT1-214ENST00000616577 HSP90AA4PQ58FG1 418 aa12.12□□□□□ -0.47
TPT1-214ENST00000616577 ZMYND15Q9H091 742 aa12.12□□□□□ -0.47
TPT1-214ENST00000616577 RRAGDQ9NQL2 400 aaPredicted RBP12.12□□□□□ -0.47
TPT1-214ENST00000616577 DNA2P51530 1060 aa12.12□□□□□ -0.47
TPT1-214ENST00000616577 ANKRD13DQ6ZTN6 518 aa12.12□□□□□ -0.47
TPT1-214ENST00000616577 TAX1BP1Q86VP1 789 aa12.12□□□□□ -0.47
TPT1-214ENST00000616577 DHX37Q8IY37 1157 aaKnown RBP12.12□□□□□ -0.47
TPT1-214ENST00000616577 KLF18A0A0U1RQI7 1052 aa12.12□□□□□ -0.47
TPT1-214ENST00000616577 SKILP12757 684 aa12.12□□□□□ -0.47
TPT1-214ENST00000616577 TMEM67Q5HYA8 995 aa12.12□□□□□ -0.47
TPT1-214ENST00000616577 IQCA1Q86XH1 822 aa12.12□□□□□ -0.47
TPT1-214ENST00000616577 NUP88Q99567 741 aaPredicted RBP12.12□□□□□ -0.47
TPT1-214ENST00000616577 SPA17Q15506 151 aa12.11□□□□□ -0.47
TPT1-214ENST00000616577 TAF4BQ92750 862 aa12.11□□□□□ -0.47
TPT1-214ENST00000616577 METAP2P50579 478 aaKnown RBP eCLIP12.11□□□□□ -0.471e-12■■□□□ 12.8
TPT1-214ENST00000616577 GNG11P61952 73 aa12.11□□□□□ -0.47
TPT1-214ENST00000616577 SLC39A6Q13433 755 aa12.11□□□□□ -0.47
TPT1-214ENST00000616577 ENOX2Q16206 610 aaKnown RBP12.11□□□□□ -0.47
TPT1-214ENST00000616577 CCDC102BQ68D86 513 aa12.11□□□□□ -0.47
TPT1-214ENST00000616577 KLHL34Q8N239 644 aa12.11□□□□□ -0.47
TPT1-214ENST00000616577 ZNF397Q8NF99 534 aaPredicted RBP12.11□□□□□ -0.47
TPT1-214ENST00000616577 MKNK2Q9HBH9 465 aa12.11□□□□□ -0.47
TPT1-214ENST00000616577 ANKRD18BA2A2Z9 1011 aa12.11□□□□□ -0.47
TPT1-214ENST00000616577 CPA1P15085 419 aa12.11□□□□□ -0.47
TPT1-214ENST00000616577 CHMLP26374 656 aa12.11□□□□□ -0.47
TPT1-214ENST00000616577 GTF2F1P35269 517 aaKnown RBP eCLIP12.11□□□□□ -0.477e-8■■□□□ 11.8
TPT1-214ENST00000616577 ZSCAN29Q8IWY8 852 aaPredicted RBP12.11□□□□□ -0.47
TPT1-214ENST00000616577 XAGE3Q8WTP9 111 aa12.11□□□□□ -0.47
TPT1-214ENST00000616577 CWC25Q9NXE8 425 aaPredicted RBP12.11□□□□□ -0.47
TPT1-214ENST00000616577 COPS6Q7L5N1 327 aa12.1□□□□□ -0.47
TPT1-214ENST00000616577 SLC26A6Q9BXS9 759 aa12.1□□□□□ -0.47
TPT1-214ENST00000616577 SYCP2Q9BX26 1530 aa12.1□□□□□ -0.47
TPT1-214ENST00000616577 GRM8O00222 908 aa12.1□□□□□ -0.47
TPT1-214ENST00000616577 NEFHP12036 1026 aa12.1□□□□□ -0.47
TPT1-214ENST00000616577 NMIQ13287 307 aaPredicted RBP12.1□□□□□ -0.47
TPT1-214ENST00000616577 NCOA7Q8NI08 942 aa12.1□□□□□ -0.47
TPT1-214ENST00000616577 RBM25P49756 843 aaKnown RBP12.1□□□□□ -0.47
TPT1-214ENST00000616577 CAVIN4Q5BKX8 364 aa12.1□□□□□ -0.47
TPT1-214ENST00000616577 Q6ZUG5 572 aa12.1□□□□□ -0.47
TPT1-214ENST00000616577 PZPP20742 1482 aa12.1□□□□□ -0.47
TPT1-214ENST00000616577 SYKP43405 635 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 RBM5P52756 815 aaKnown RBP eCLIP12.09□□□□□ -0.47
TPT1-214ENST00000616577 NLRP5P59047 1200 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 TYRO3Q06418 890 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 IFNL2Q8IZJ0 200 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 ANKRD24Q8TF21 1146 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.09□□□□□ -0.47
TPT1-214ENST00000616577 V9GYY5 206 aaPredicted RBP12.09□□□□□ -0.47
TPT1-214ENST00000616577 HSP90AB3PQ58FF7 597 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 SLC5A1P13866 664 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 FKBP15Q5T1M5 1219 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 CACNA2D4Q7Z3S7 1137 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 RBSNQ9H1K0 784 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 RNF41Q9H4P4 317 aaPredicted RBP12.09□□□□□ -0.47
TPT1-214ENST00000616577 PAXBP1Q9Y5B6 917 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 COL17A1Q9UMD9 1497 aaPredicted RBP12.09□□□□□ -0.47
TPT1-214ENST00000616577 A0A1W2PP64 1363 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 AOPEPQ8N6M6 819 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 PLCH2O75038 1416 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 POGZQ7Z3K3 1410 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 RAPGEF6Q8TEU7 1601 aa12.09□□□□□ -0.47
TPT1-214ENST00000616577 CCDC194A0A1B0GVG4 234 aa12.08□□□□□ -0.47
TPT1-214ENST00000616577 SNRPA1P09661 255 aaKnown RBP12.08□□□□□ -0.47
TPT1-214ENST00000616577 PPIP5K1Q6PFW1 1433 aa12.08□□□□□ -0.47
TPT1-214ENST00000616577 LMBR1LQ6UX01 489 aa12.08□□□□□ -0.47
TPT1-214ENST00000616577 G2E3Q7L622 706 aa12.08□□□□□ -0.47
TPT1-214ENST00000616577 TRAPPC8Q9Y2L5 1435 aa12.08□□□□□ -0.47
TPT1-214ENST00000616577 SYT1P21579 422 aa12.08□□□□□ -0.48
TPT1-214ENST00000616577 UBASH3AP57075 661 aa12.08□□□□□ -0.48
TPT1-214ENST00000616577 CHRNA2Q15822 529 aa12.08□□□□□ -0.48
TPT1-214ENST00000616577 TMEM132AQ24JP5 1023 aa12.08□□□□□ -0.48
TPT1-214ENST00000616577 MRPS27Q92552 414 aaKnown RBP12.08□□□□□ -0.48
TPT1-214ENST00000616577 PHAXQ9H814 394 aaKnown RBP12.08□□□□□ -0.48
TPT1-214ENST00000616577 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
TPT1-214ENST00000616577 MARCKSP29966 332 aaPredicted RBP12.08□□□□□ -0.48
TPT1-214ENST00000616577 CWF19L2Q2TBE0 894 aaKnown RBP12.08□□□□□ -0.48
TPT1-214ENST00000616577 KSR2Q6VAB6 950 aa12.08□□□□□ -0.48
TPT1-214ENST00000616577 CCDC150Q8NCX0 1101 aa12.08□□□□□ -0.48
TPT1-214ENST00000616577 DNAI1Q9UI46 699 aa12.08□□□□□ -0.48
TPT1-214ENST00000616577 DENND4BO75064 1496 aaPredicted RBP12.08□□□□□ -0.48
TPT1-214ENST00000616577 YEATS4O95619 227 aa12.08□□□□□ -0.48
TPT1-214ENST00000616577 PTGS1P23219 599 aa12.08□□□□□ -0.48
TPT1-214ENST00000616577 CCDC12Q8WUD4 166 aaPredicted RBP12.08□□□□□ -0.48
TPT1-214ENST00000616577 INTS4Q96HW7 963 aaKnown RBP12.08□□□□□ -0.48
TPT1-214ENST00000616577 DUOX2Q9NRD8 1548 aa12.08□□□□□ -0.48
TPT1-214ENST00000616577 ALDH1L1O75891 902 aa12.07□□□□□ -0.48
TPT1-214ENST00000616577 CATIPQ7Z7H3 387 aa12.07□□□□□ -0.48
TPT1-214ENST00000616577 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.07□□□□□ -0.487e-8■□□□□ 8.8
TPT1-214ENST00000616577 DTNBO60941 627 aa12.07□□□□□ -0.48
TPT1-214ENST00000616577 ZNF76P36508 570 aa12.07□□□□□ -0.48
TPT1-214ENST00000616577 MCMDC2Q4G0Z9 681 aa12.07□□□□□ -0.48
TPT1-214ENST00000616577 CHST3Q7LGC8 479 aa12.07□□□□□ -0.48
TPT1-214ENST00000616577 SEC63Q9UGP8 760 aaKnown RBP12.07□□□□□ -0.48
TPT1-214ENST00000616577 LMOD1P29536 600 aaPredicted RBP12.07□□□□□ -0.48
TPT1-214ENST00000616577 TDRD12Q587J7 1177 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms