RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	PARP10	Q53GL7	1025 aa		29.02	■■■□□ 2.24
ACACA-238	ENST00000616352	NRXN2	Q9P2S2	1712 aa		29.02	■■■□□ 2.24
ACACA-238	ENST00000616352	R3HDM1	Q15032	1099 aa	Known RBP	29.02	■■■□□ 2.24
ACACA-238	ENST00000616352	NLGN1	Q8N2Q7	840 aa		29.02	■■■□□ 2.24
ACACA-238	ENST00000616352	UTY	O14607	1347 aa		29.01	■■■□□ 2.24
ACACA-238	ENST00000616352	DDX60	Q8IY21	1712 aa	Known RBP	29.01	■■■□□ 2.23
ACACA-238	ENST00000616352	GRM8	O00222	908 aa		29.01	■■■□□ 2.23
ACACA-238	ENST00000616352	NEFL	P07196	543 aa		29.01	■■■□□ 2.23
ACACA-238	ENST00000616352	TM4SF1	P30408	202 aa		29.01	■■■□□ 2.23
ACACA-238	ENST00000616352	SETDB2	Q96T68	719 aa		29.01	■■■□□ 2.23
ACACA-238	ENST00000616352	MEIS3	Q99687	375 aa		29.01	■■■□□ 2.23
ACACA-238	ENST00000616352	SUSD4	Q5VX71	490 aa		29	■■■□□ 2.23
ACACA-238	ENST00000616352	BICDL1	Q6ZP65	573 aa		29	■■■□□ 2.23
ACACA-238	ENST00000616352	EXOC6	Q8TAG9	804 aa		29	■■■□□ 2.23
ACACA-238	ENST00000616352	SLC16A10	Q8TF71	515 aa		29	■■■□□ 2.23
ACACA-238	ENST00000616352	CARMIL3	Q8ND23	1372 aa		28.99	■■■□□ 2.23
ACACA-238	ENST00000616352	SOCS7	O14512	581 aa		28.99	■■■□□ 2.23
ACACA-238	ENST00000616352	C9orf78	Q9NZ63	289 aa	Predicted RBP	28.98	■■■□□ 2.23
ACACA-238	ENST00000616352		H7C1W4	665 aa		28.98	■■■□□ 2.23
ACACA-238	ENST00000616352	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.98	■■■□□ 2.23
ACACA-238	ENST00000616352	ZBTB40	Q9NUA8	1239 aa		28.98	■■■□□ 2.23
ACACA-238	ENST00000616352	NTSR2	O95665	410 aa		28.97	■■■□□ 2.23
ACACA-238	ENST00000616352	CASP7	P55210	303 aa		28.97	■■■□□ 2.23
ACACA-238	ENST00000616352	PCCA	P05165	728 aa	Predicted RBP	28.96	■■■□□ 2.23
ACACA-238	ENST00000616352	PPP1R42	Q7Z4L9	355 aa		28.96	■■■□□ 2.23
ACACA-238	ENST00000616352	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	28.96	■■■□□ 2.23
ACACA-238	ENST00000616352	CHMP4B	Q9H444	224 aa	Known RBP	28.96	■■■□□ 2.23
ACACA-238	ENST00000616352	GNAI3	P08754	354 aa		28.95	■■■□□ 2.23
ACACA-238	ENST00000616352	DDR1	Q08345	913 aa		28.95	■■■□□ 2.23
ACACA-238	ENST00000616352	MSL1	Q68DK7	614 aa		28.95	■■■□□ 2.23
ACACA-238	ENST00000616352	UBE3B	Q7Z3V4	1068 aa		28.95	■■■□□ 2.23
ACACA-238	ENST00000616352	UTP14A	Q9BVJ6	771 aa	Known RBP	28.95	■■■□□ 2.23
ACACA-238	ENST00000616352	TRMT112	Q9UI30	125 aa	Known RBP	28.95	■■■□□ 2.23
ACACA-238	ENST00000616352	PSD	A5PKW4	1024 aa	Predicted RBP	28.94	■■■□□ 2.22
ACACA-238	ENST00000616352	POLRMT	O00411	1230 aa	Known RBP	28.94	■■■□□ 2.22
ACACA-238	ENST00000616352	FAM89A	Q96GI7	184 aa		28.94	■■■□□ 2.22
ACACA-238	ENST00000616352	UBTFL1	P0CB47	393 aa	Predicted RBP	28.93	■■■□□ 2.22
ACACA-238	ENST00000616352	JARID2	Q92833	1246 aa	Predicted RBP	28.93	■■■□□ 2.22
ACACA-238	ENST00000616352	FAM177B	A6PVY3	158 aa		28.92	■■■□□ 2.22
ACACA-238	ENST00000616352	NYX	Q9GZU5	481 aa		28.92	■■■□□ 2.22
ACACA-238	ENST00000616352	SH3TC1	Q8TE82	1336 aa		28.92	■■■□□ 2.22
ACACA-238	ENST00000616352	CDHR2	Q9BYE9	1310 aa		28.92	■■■□□ 2.22
ACACA-238	ENST00000616352	MMP10	P09238	476 aa		28.91	■■■□□ 2.22
ACACA-238	ENST00000616352	AAMP	Q13685	434 aa		28.91	■■■□□ 2.22
ACACA-238	ENST00000616352	RTL5	Q5HYW3	569 aa	Predicted RBP	28.91	■■■□□ 2.22
ACACA-238	ENST00000616352	NBPF5P	Q86XG9	351 aa	Predicted RBP	28.91	■■■□□ 2.22
ACACA-238	ENST00000616352	SYNE4	Q8N205	404 aa		28.91	■■■□□ 2.22
ACACA-238	ENST00000616352	ANKRD31	Q8N7Z5	1873 aa		28.91	■■■□□ 2.22
ACACA-238	ENST00000616352	SERPINB2	P05120	415 aa		28.9	■■■□□ 2.22
ACACA-238	ENST00000616352	KAZALD1	Q96I82	304 aa		28.9	■■■□□ 2.22
ACACA-238	ENST00000616352	GNAI2	P04899	355 aa		28.89	■■■□□ 2.22
ACACA-238	ENST00000616352	TPTE2	Q6XPS3	522 aa		28.89	■■■□□ 2.22
ACACA-238	ENST00000616352	NUTM1	Q86Y26	1132 aa		28.89	■■■□□ 2.22
ACACA-238	ENST00000616352	SUCLG2	Q96I99	432 aa		28.89	■■■□□ 2.22
ACACA-238	ENST00000616352	MTFR1L	Q9H019	292 aa		28.89	■■■□□ 2.22
ACACA-238	ENST00000616352	TNRC6C	Q9HCJ0	1690 aa	Known RBP	28.89	■■■□□ 2.22
ACACA-238	ENST00000616352	C1orf115	Q9H7X2	142 aa		28.88	■■■□□ 2.21
ACACA-238	ENST00000616352	LRRFIP2	Q9Y608	721 aa	Known RBP	28.88	■■■□□ 2.21
ACACA-238	ENST00000616352	ABCC12	Q96J65	1359 aa		28.88	■■■□□ 2.21
ACACA-238	ENST00000616352	ZBTB7A	O95365	584 aa		28.87	■■■□□ 2.21
ACACA-238	ENST00000616352	ERFE	Q4G0M1	354 aa		28.87	■■■□□ 2.21
ACACA-238	ENST00000616352	PRR5L	Q6MZQ0	368 aa		28.87	■■■□□ 2.21
ACACA-238	ENST00000616352	CNBD1	Q8NA66	436 aa		28.87	■■■□□ 2.21
ACACA-238	ENST00000616352	PLA2G12B	Q9BX93	195 aa		28.87	■■■□□ 2.21
ACACA-238	ENST00000616352	HDAC5	Q9UQL6	1122 aa		28.87	■■■□□ 2.21
ACACA-238	ENST00000616352	PARP3	Q9Y6F1	533 aa		28.87	■■■□□ 2.21
ACACA-238	ENST00000616352	RIC1	Q4ADV7	1423 aa		28.86	■■■□□ 2.21
ACACA-238	ENST00000616352	IRS4	O14654	1257 aa	Predicted RBP	28.86	■■■□□ 2.21
ACACA-238	ENST00000616352	ERICH6B	Q5W0A0	696 aa		28.86	■■■□□ 2.21
ACACA-238	ENST00000616352	SLC10A5	Q5PT55	438 aa		28.85	■■■□□ 2.21
ACACA-238	ENST00000616352	KIF13B	Q9NQT8	1826 aa		28.84	■■■□□ 2.21
ACACA-238	ENST00000616352	EPHA10	Q5JZY3	1008 aa		28.84	■■■□□ 2.21
ACACA-238	ENST00000616352	FOXO4	P98177	505 aa		28.83	■■■□□ 2.21
ACACA-238	ENST00000616352	BICC1	Q9H694	974 aa	Known RBP	28.83	■■■□□ 2.21
ACACA-238	ENST00000616352	GTF2E1	P29083	439 aa	Predicted RBP	28.83	■■■□□ 2.21
ACACA-238	ENST00000616352	PCDHB15	Q9Y5E8	787 aa		28.83	■■■□□ 2.21
ACACA-238	ENST00000616352	HCLS1	P14317	486 aa	Predicted RBP	28.82	■■■□□ 2.2
ACACA-238	ENST00000616352	RABL6	Q3YEC7	729 aa	Predicted RBP	28.82	■■■□□ 2.2
ACACA-238	ENST00000616352	ANKRD44	Q8N8A2	993 aa		28.82	■■■□□ 2.2
ACACA-238	ENST00000616352	PDE8A	O60658	829 aa		28.81	■■■□□ 2.2
ACACA-238	ENST00000616352	ATF5	Q9Y2D1	282 aa	Predicted RBP	28.81	■■■□□ 2.2
ACACA-238	ENST00000616352	HSP90B1	P14625	803 aa	Known RBP	28.8	■■■□□ 2.2
ACACA-238	ENST00000616352	CCDC24	Q8N4L8	307 aa		28.8	■■■□□ 2.2
ACACA-238	ENST00000616352	SGIP1	Q9BQI5	828 aa		28.8	■■■□□ 2.2
ACACA-238	ENST00000616352	NPHP1	O15259	732 aa		28.8	■■■□□ 2.2
ACACA-238	ENST00000616352	ST5	P78524	1137 aa		28.8	■■■□□ 2.2
ACACA-238	ENST00000616352	MTX1	Q13505	466 aa		28.8	■■■□□ 2.2
ACACA-238	ENST00000616352	CEP85	Q6P2H3	762 aa		28.8	■■■□□ 2.2
ACACA-238	ENST00000616352	TAF1	P21675	1872 aa		28.79	■■■□□ 2.2
ACACA-238	ENST00000616352	CTSW	P56202	376 aa		28.78	■■■□□ 2.2
ACACA-238	ENST00000616352	COL11A2	P13942	1736 aa	Predicted RBP	28.78	■■■□□ 2.2
ACACA-238	ENST00000616352	CSF1R	P07333	972 aa		28.77	■■■□□ 2.2
ACACA-238	ENST00000616352	SIRT2	Q8IXJ6	389 aa		28.77	■■■□□ 2.2
ACACA-238	ENST00000616352	RPAP2	Q8IXW5	612 aa	Predicted RBP	28.77	■■■□□ 2.2
ACACA-238	ENST00000616352	LMBR1L	Q6UX01	489 aa		28.76	■■■□□ 2.2
ACACA-238	ENST00000616352	C3orf67	Q6ZVT6	689 aa		28.76	■■■□□ 2.2
ACACA-238	ENST00000616352	TTLL11	Q8NHH1	800 aa		28.76	■■■□□ 2.2
ACACA-238	ENST00000616352	PTGER2	P43116	358 aa		28.76	■■■□□ 2.19
ACACA-238	ENST00000616352	ATP8B2	P98198	1209 aa		28.76	■■■□□ 2.19
ACACA-238	ENST00000616352	C10orf71	Q711Q0	1435 aa		28.75	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms