RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 G3BP1Q13283 466 aaKnown RBP eCLIP12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 RTL5Q5HYW3 569 aaPredicted RBP12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 CASC1Q6TDU7 716 aa12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 KLHDC4Q8TBB5 520 aa12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 DAXXQ9UER7 740 aaPredicted RBP12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 LOC102724428A0A0B4J2F2 783 aa12.29□□□□□ -0.44
AL353770.3-201ENST00000616253 ATP6V1AP38606 617 aa12.29□□□□□ -0.44
AL353770.3-201ENST00000616253 SIK1P57059 783 aa12.29□□□□□ -0.44
AL353770.3-201ENST00000616253 CLASRPQ8N2M8 674 aaKnown RBP12.29□□□□□ -0.44
AL353770.3-201ENST00000616253 QTRT2Q9H974 415 aaKnown RBP12.29□□□□□ -0.44
AL353770.3-201ENST00000616253 COL5A3P25940 1745 aaPredicted RBP12.29□□□□□ -0.44
AL353770.3-201ENST00000616253 MYH14Q7Z406 1995 aaKnown RBP12.29□□□□□ -0.44
AL353770.3-201ENST00000616253 RFX5P48382 616 aaPredicted RBP12.29□□□□□ -0.44
AL353770.3-201ENST00000616253 RBM25P49756 843 aaKnown RBP12.29□□□□□ -0.44
AL353770.3-201ENST00000616253 FOXO4P98177 505 aa12.29□□□□□ -0.44
AL353770.3-201ENST00000616253 TRIM6-TRIM34B2RNG4 842 aa12.28□□□□□ -0.44
AL353770.3-201ENST00000616253 EIF5BO60841 1220 aaKnown RBP12.28□□□□□ -0.44
AL353770.3-201ENST00000616253 SASH1O94885 1247 aa12.28□□□□□ -0.44
AL353770.3-201ENST00000616253 IL6STP40189 918 aaPredicted RBP12.28□□□□□ -0.44
AL353770.3-201ENST00000616253 LMBR1LQ6UX01 489 aa12.28□□□□□ -0.44
AL353770.3-201ENST00000616253 GIGYF2Q6Y7W6 1299 aaKnown RBP12.28□□□□□ -0.44
AL353770.3-201ENST00000616253 PI4K2BQ8TCG2 481 aa12.28□□□□□ -0.44
AL353770.3-201ENST00000616253 SMARCC1Q92922 1105 aaPredicted RBP12.28□□□□□ -0.44
AL353770.3-201ENST00000616253 COPRSQ9NQ92 184 aa12.28□□□□□ -0.44
AL353770.3-201ENST00000616253 USP42Q9H9J4 1324 aaKnown RBP12.28□□□□□ -0.44
AL353770.3-201ENST00000616253 CRKLP46109 303 aaKnown RBP12.27□□□□□ -0.44
AL353770.3-201ENST00000616253 TRIM28Q13263 835 aaKnown RBP12.27□□□□□ -0.44
AL353770.3-201ENST00000616253 ITPK1Q13572 414 aa12.27□□□□□ -0.44
AL353770.3-201ENST00000616253 HLFQ16534 295 aa12.27□□□□□ -0.44
AL353770.3-201ENST00000616253 AACSQ86V21 672 aa12.27□□□□□ -0.44
AL353770.3-201ENST00000616253 RILPL2Q969X0 211 aa12.27□□□□□ -0.44
AL353770.3-201ENST00000616253 CCDC87Q9NVE4 849 aa12.27□□□□□ -0.44
AL353770.3-201ENST00000616253 CHMP3Q9Y3E7 222 aa12.27□□□□□ -0.44
AL353770.3-201ENST00000616253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.27□□□□□ -0.44
AL353770.3-201ENST00000616253 ZNF831Q5JPB2 1677 aa12.27□□□□□ -0.45
AL353770.3-201ENST00000616253 NHSQ6T4R5 1651 aa12.27□□□□□ -0.45
AL353770.3-201ENST00000616253 BTAF1O14981 1849 aa12.27□□□□□ -0.45
AL353770.3-201ENST00000616253 IFIT2P09913 472 aaKnown RBP12.27□□□□□ -0.45
AL353770.3-201ENST00000616253 PTPN12Q05209 780 aaKnown RBP12.27□□□□□ -0.45
AL353770.3-201ENST00000616253 BECN1Q14457 450 aa12.27□□□□□ -0.45
AL353770.3-201ENST00000616253 INTS5Q6P9B9 1019 aaKnown RBP12.27□□□□□ -0.45
AL353770.3-201ENST00000616253 DZIP3Q86Y13 1208 aaKnown RBP12.27□□□□□ -0.45
AL353770.3-201ENST00000616253 TTC41PQ6P2S7 1318 aa12.26□□□□□ -0.45
AL353770.3-201ENST00000616253 HSP90AB3PQ58FF7 597 aa12.26□□□□□ -0.45
AL353770.3-201ENST00000616253 TRPC5Q9UL62 973 aaPredicted RBP12.26□□□□□ -0.45
AL353770.3-201ENST00000616253 ATRNO75882 1429 aa12.26□□□□□ -0.45
AL353770.3-201ENST00000616253 MAP4K4O95819 1239 aaPredicted RBP12.25□□□□□ -0.45
AL353770.3-201ENST00000616253 PCCAP05165 728 aaPredicted RBP12.25□□□□□ -0.45
AL353770.3-201ENST00000616253 GPTP24298 496 aa12.25□□□□□ -0.45
AL353770.3-201ENST00000616253 EIF5P55010 431 aaKnown RBP12.25□□□□□ -0.45
AL353770.3-201ENST00000616253 GPATCH3Q96I76 525 aa12.25□□□□□ -0.45
AL353770.3-201ENST00000616253 GJD4Q96KN9 370 aaPredicted RBP12.25□□□□□ -0.45
AL353770.3-201ENST00000616253 TBC1D2BQ9UPU7 963 aa12.25□□□□□ -0.45
AL353770.3-201ENST00000616253 MYH3P11055 1940 aa12.25□□□□□ -0.45
AL353770.3-201ENST00000616253 ERVV-1B6SEH8 477 aa12.25□□□□□ -0.45
AL353770.3-201ENST00000616253 ERC2O15083 957 aa12.25□□□□□ -0.45
AL353770.3-201ENST00000616253 GLRX3O76003 335 aaKnown RBP12.25□□□□□ -0.45
AL353770.3-201ENST00000616253 EAF2Q96CJ1 260 aaPredicted RBP12.25□□□□□ -0.45
AL353770.3-201ENST00000616253 ECHDC1Q9NTX5 307 aa12.25□□□□□ -0.45
AL353770.3-201ENST00000616253 SBF2Q86WG5 1849 aa12.24□□□□□ -0.45
AL353770.3-201ENST00000616253 NLRP10Q86W26 655 aa12.24□□□□□ -0.45
AL353770.3-201ENST00000616253 ZBTB38Q8NAP3 1195 aaPredicted RBP12.24□□□□□ -0.45
AL353770.3-201ENST00000616253 FAM89AQ96GI7 184 aa12.24□□□□□ -0.45
AL353770.3-201ENST00000616253 TLR7Q9NYK1 1049 aaKnown RBP12.24□□□□□ -0.45
AL353770.3-201ENST00000616253 REC8O95072 547 aa12.23□□□□□ -0.45
AL353770.3-201ENST00000616253 CHMLP26374 656 aa12.23□□□□□ -0.45
AL353770.3-201ENST00000616253 PTF1AQ7RTS3 328 aa12.23□□□□□ -0.45
AL353770.3-201ENST00000616253 TBC1D2Q9BYX2 928 aa12.23□□□□□ -0.45
AL353770.3-201ENST00000616253 CCDC8Q9H0W5 538 aaPredicted RBP12.23□□□□□ -0.45
AL353770.3-201ENST00000616253 BCORQ6W2J9 1755 aa12.23□□□□□ -0.45
AL353770.3-201ENST00000616253 TFCP2Q12800 502 aa12.23□□□□□ -0.45
AL353770.3-201ENST00000616253 FAM182BQ5T319 152 aa12.23□□□□□ -0.45
AL353770.3-201ENST00000616253 CNTROBQ8N137 903 aa12.23□□□□□ -0.45
AL353770.3-201ENST00000616253 ESYT1Q9BSJ8 1104 aa12.23□□□□□ -0.45
AL353770.3-201ENST00000616253 ANP32EQ9BTT0 268 aa12.23□□□□□ -0.45
AL353770.3-201ENST00000616253 USP26Q9BXU7 913 aa12.23□□□□□ -0.45
AL353770.3-201ENST00000616253 CDHR2Q9BYE9 1310 aa12.23□□□□□ -0.45
AL353770.3-201ENST00000616253 LINC00116Q8NCU8 138 aa12.22□□□□□ -0.45
AL353770.3-201ENST00000616253 KIF2CQ99661 725 aa12.22□□□□□ -0.45
AL353770.3-201ENST00000616253 PLA2G12BQ9BX93 195 aa12.22□□□□□ -0.45
AL353770.3-201ENST00000616253 UBN2Q6ZU65 1347 aa12.22□□□□□ -0.45
AL353770.3-201ENST00000616253 TNNI3KQ59H18 835 aa12.21□□□□□ -0.45
AL353770.3-201ENST00000616253 SYNE4Q8N205 404 aa12.21□□□□□ -0.45
AL353770.3-201ENST00000616253 FPGT-TNNI3KV9GXZ4 949 aa12.21□□□□□ -0.45
AL353770.3-201ENST00000616253 CAMTA2O94983 1202 aa12.21□□□□□ -0.46
AL353770.3-201ENST00000616253 ATG9AQ7Z3C6 839 aa12.21□□□□□ -0.46
AL353770.3-201ENST00000616253 ZNF34Q8IZ26 560 aa12.21□□□□□ -0.46
AL353770.3-201ENST00000616253 ZNF594Q96JF6 807 aaPredicted RBP12.21□□□□□ -0.46
AL353770.3-201ENST00000616253 TRMT112Q9UI30 125 aaKnown RBP12.21□□□□□ -0.46
AL353770.3-201ENST00000616253 KCNQ4P56696 695 aa12.2□□□□□ -0.46
AL353770.3-201ENST00000616253 CCDC85AQ96PX6 553 aaPredicted RBP12.2□□□□□ -0.46
AL353770.3-201ENST00000616253 LY75O60449 1722 aa12.2□□□□□ -0.46
AL353770.3-201ENST00000616253 EYA2O00167 538 aa12.19□□□□□ -0.46
AL353770.3-201ENST00000616253 IRS4O14654 1257 aaPredicted RBP12.19□□□□□ -0.46
AL353770.3-201ENST00000616253 ONECUT3O60422 494 aaPredicted RBP12.19□□□□□ -0.46
AL353770.3-201ENST00000616253 IL15P40933 162 aaPredicted RBP12.19□□□□□ -0.46
AL353770.3-201ENST00000616253 CCDC57Q2TAC2 916 aa12.19□□□□□ -0.46
AL353770.3-201ENST00000616253 HSCBQ8IWL3 235 aa12.19□□□□□ -0.46
AL353770.3-201ENST00000616253 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
AL353770.3-201ENST00000616253 DBNLQ9UJU6 430 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms