RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 PDIA4P13667 645 aaKnown RBP13.78□□□□□ -0.2
RABGAP1-213ENST00000616002 BICDL1Q6ZP65 573 aa13.78□□□□□ -0.2
RABGAP1-213ENST00000616002 CIZ1Q9ULV3 898 aaPredicted RBP13.78□□□□□ -0.2
RABGAP1-213ENST00000616002 DLEC1Q9Y238 1755 aa13.78□□□□□ -0.2
RABGAP1-213ENST00000616002 STARD3NLO95772 234 aa13.77□□□□□ -0.21
RABGAP1-213ENST00000616002 MTHFSDQ2M296 383 aaKnown RBP13.77□□□□□ -0.21
RABGAP1-213ENST00000616002 DPY19L2Q6NUT2 758 aa13.77□□□□□ -0.21
RABGAP1-213ENST00000616002 TNS4Q8IZW8 715 aa13.77□□□□□ -0.21
RABGAP1-213ENST00000616002 TTC5Q8N0Z6 440 aa13.77□□□□□ -0.21
RABGAP1-213ENST00000616002 SNX21Q969T3 373 aa13.77□□□□□ -0.21
RABGAP1-213ENST00000616002 DDX11L8A8MPP1 907 aa13.76□□□□□ -0.21
RABGAP1-213ENST00000616002 CAPN15O75808 1086 aa13.76□□□□□ -0.21
RABGAP1-213ENST00000616002 MRE11P49959 708 aa13.76□□□□□ -0.21
RABGAP1-213ENST00000616002 PRELPP51888 382 aa13.76□□□□□ -0.21
RABGAP1-213ENST00000616002 DZIP1LQ8IYY4 767 aaKnown RBP13.76□□□□□ -0.21
RABGAP1-213ENST00000616002 HS6ST3Q8IZP7 471 aa13.76□□□□□ -0.21
RABGAP1-213ENST00000616002 DDX19BQ9UMR2 479 aa13.76□□□□□ -0.21
RABGAP1-213ENST00000616002 TIAM2Q8IVF5 1701 aa13.76□□□□□ -0.21
RABGAP1-213ENST00000616002 A0A087WZG4 1122 aa13.75□□□□□ -0.21
RABGAP1-213ENST00000616002 NFKBIEO00221 500 aa13.75□□□□□ -0.21
RABGAP1-213ENST00000616002 RLBP1P12271 317 aa13.75□□□□□ -0.21
RABGAP1-213ENST00000616002 CLCN1P35523 988 aa13.75□□□□□ -0.21
RABGAP1-213ENST00000616002 SMC5Q8IY18 1101 aa13.75□□□□□ -0.21
RABGAP1-213ENST00000616002 ZNF428Q96B54 188 aa13.75□□□□□ -0.21
RABGAP1-213ENST00000616002 C22orf23Q9BZE7 217 aa13.75□□□□□ -0.21
RABGAP1-213ENST00000616002 CARMIL3Q8ND23 1372 aa13.75□□□□□ -0.21
RABGAP1-213ENST00000616002 CCDC88AQ3V6T2 1871 aa13.75□□□□□ -0.21
RABGAP1-213ENST00000616002 KIF16BQ96L93 1317 aa13.75□□□□□ -0.21
RABGAP1-213ENST00000616002 RBM25P49756 843 aaKnown RBP13.75□□□□□ -0.21
RABGAP1-213ENST00000616002 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.21
RABGAP1-213ENST00000616002 DIAPH1O60610 1272 aaKnown RBP13.74□□□□□ -0.21
RABGAP1-213ENST00000616002 PDE6BP35913 854 aa13.74□□□□□ -0.21
RABGAP1-213ENST00000616002 EIF5P55010 431 aaKnown RBP13.74□□□□□ -0.21
RABGAP1-213ENST00000616002 CHMP4BQ9H444 224 aaKnown RBP13.74□□□□□ -0.21
RABGAP1-213ENST00000616002 ZNF330Q9Y3S2 320 aaPredicted RBP13.74□□□□□ -0.21
RABGAP1-213ENST00000616002 XRCC6P12956 609 aaKnown RBP eCLIP13.73□□□□□ -0.21
RABGAP1-213ENST00000616002 DDIT3P35638 169 aa13.73□□□□□ -0.21
RABGAP1-213ENST00000616002 ERFEQ4G0M1 354 aa13.73□□□□□ -0.21
RABGAP1-213ENST00000616002 TBC1D9BQ66K14 1250 aa13.73□□□□□ -0.21
RABGAP1-213ENST00000616002 SAMD1Q6SPF0 538 aaPredicted RBP13.73□□□□□ -0.21
RABGAP1-213ENST00000616002 BRIP1Q9BX63 1249 aa13.73□□□□□ -0.21
RABGAP1-213ENST00000616002 SLKQ9H2G2 1235 aaPredicted RBP13.73□□□□□ -0.21
RABGAP1-213ENST00000616002 PNNQ9H307 717 aaKnown RBP13.73□□□□□ -0.21
RABGAP1-213ENST00000616002 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
RABGAP1-213ENST00000616002 UBR2Q8IWV8 1755 aa13.73□□□□□ -0.21
RABGAP1-213ENST00000616002 NPHP1O15259 732 aa13.72□□□□□ -0.21
RABGAP1-213ENST00000616002 C21orf2O43822 256 aa13.72□□□□□ -0.21
RABGAP1-213ENST00000616002 HSPA1AP0DMV8 641 aaKnown RBP13.72□□□□□ -0.21
RABGAP1-213ENST00000616002 HSPA1BP0DMV9 641 aaKnown RBP13.72□□□□□ -0.21
RABGAP1-213ENST00000616002 TEFQ10587 303 aa13.72□□□□□ -0.21
RABGAP1-213ENST00000616002 SKOR2Q2VWA4 1001 aaPredicted RBP13.72□□□□□ -0.21
RABGAP1-213ENST00000616002 TEX13AQ9BXU3 409 aaPredicted RBP13.72□□□□□ -0.21
RABGAP1-213ENST00000616002 PCNTO95613 3336 aa13.72□□□□□ -0.21
RABGAP1-213ENST00000616002 IPO8O15397 1037 aaKnown RBP13.71□□□□□ -0.21
RABGAP1-213ENST00000616002 ZNF496Q96IT1 587 aaPredicted RBP13.71□□□□□ -0.21
RABGAP1-213ENST00000616002 TBC1D2BQ9UPU7 963 aa13.71□□□□□ -0.21
RABGAP1-213ENST00000616002 POTECB2RU33 542 aa13.71□□□□□ -0.22
RABGAP1-213ENST00000616002 TRAK2O60296 914 aa13.71□□□□□ -0.22
RABGAP1-213ENST00000616002 ALDH1L2Q3SY69 923 aa13.71□□□□□ -0.22
RABGAP1-213ENST00000616002 PRR5LQ6MZQ0 368 aa13.71□□□□□ -0.22
RABGAP1-213ENST00000616002 ZNF790Q6PG37 636 aa13.71□□□□□ -0.22
RABGAP1-213ENST00000616002 FTSJ3Q8IY81 847 aaKnown RBP13.71□□□□□ -0.22
RABGAP1-213ENST00000616002 CCDC24Q8N4L8 307 aa13.71□□□□□ -0.22
RABGAP1-213ENST00000616002 C1orf115Q9H7X2 142 aa13.71□□□□□ -0.22
RABGAP1-213ENST00000616002 ANKRD31Q8N7Z5 1873 aa13.7□□□□□ -0.22
RABGAP1-213ENST00000616002 HEG1Q9ULI3 1381 aa13.7□□□□□ -0.22
RABGAP1-213ENST00000616002 GNAT3A8MTJ3 354 aa13.7□□□□□ -0.22
RABGAP1-213ENST00000616002 IL6STP40189 918 aaPredicted RBP13.7□□□□□ -0.22
RABGAP1-213ENST00000616002 ATF7IPQ6VMQ6 1270 aa13.7□□□□□ -0.22
RABGAP1-213ENST00000616002 HSCBQ8IWL3 235 aa13.7□□□□□ -0.22
RABGAP1-213ENST00000616002 SETDB2Q96T68 719 aa13.7□□□□□ -0.22
RABGAP1-213ENST00000616002 TAOK3Q9H2K8 898 aa13.7□□□□□ -0.22
RABGAP1-213ENST00000616002 RRAGDQ9NQL2 400 aaPredicted RBP13.7□□□□□ -0.22
RABGAP1-213ENST00000616002 SCN7AQ01118 1682 aa13.69□□□□□ -0.22
RABGAP1-213ENST00000616002 U2SURPO15042 1029 aaKnown RBP13.69□□□□□ -0.22
RABGAP1-213ENST00000616002 CNBD1Q8NA66 436 aa13.69□□□□□ -0.22
RABGAP1-213ENST00000616002 GAS2L2Q8NHY3 880 aa13.69□□□□□ -0.22
RABGAP1-213ENST00000616002 NECTIN2Q92692 538 aa13.69□□□□□ -0.22
RABGAP1-213ENST00000616002 CNKSR1Q969H4 720 aa13.69□□□□□ -0.22
RABGAP1-213ENST00000616002 FER1L6Q2WGJ9 1857 aa13.68□□□□□ -0.22
RABGAP1-213ENST00000616002 DICER1Q9UPY3 1922 aaKnown RBP13.68□□□□□ -0.22
RABGAP1-213ENST00000616002 ST5P78524 1137 aa13.68□□□□□ -0.22
RABGAP1-213ENST00000616002 CHADLQ6NUI6 762 aa13.68□□□□□ -0.22
RABGAP1-213ENST00000616002 CLEC17AQ6ZS10 378 aa13.68□□□□□ -0.22
RABGAP1-213ENST00000616002 IL17REQ8NFR9 667 aa13.68□□□□□ -0.22
RABGAP1-213ENST00000616002 FMNL2Q96PY5 1086 aa13.68□□□□□ -0.22
RABGAP1-213ENST00000616002 PLEKHF1Q96S99 279 aa13.68□□□□□ -0.22
RABGAP1-213ENST00000616002 COL3A1P02461 1466 aaPredicted RBP13.68□□□□□ -0.22
RABGAP1-213ENST00000616002 LTBP3Q9NS15 1303 aa13.68□□□□□ -0.22
RABGAP1-213ENST00000616002 COL11A2P13942 1736 aaPredicted RBP13.68□□□□□ -0.22
RABGAP1-213ENST00000616002 NUCB1Q02818 461 aa13.67□□□□□ -0.22
RABGAP1-213ENST00000616002 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
RABGAP1-213ENST00000616002 SOGA3Q5TF21 947 aa13.67□□□□□ -0.22
RABGAP1-213ENST00000616002 STYK1Q6J9G0 422 aa13.67□□□□□ -0.22
RABGAP1-213ENST00000616002 CREBZFQ9NS37 354 aa13.67□□□□□ -0.22
RABGAP1-213ENST00000616002 ZBTB40Q9NUA8 1239 aa13.67□□□□□ -0.22
RABGAP1-213ENST00000616002 DDNO94850 711 aaPredicted RBP13.66□□□□□ -0.22
RABGAP1-213ENST00000616002 A1BGP04217 495 aa13.66□□□□□ -0.22
RABGAP1-213ENST00000616002 PRPF40BQ6NWY9 871 aaKnown RBP13.66□□□□□ -0.22
RABGAP1-213ENST00000616002 CAMTA2O94983 1202 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms