RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 TTC31Q49AM3 519 aaPredicted RBP21.68■■□□□ 1.06
SPAST-203ENST00000615843 INTS4Q96HW7 963 aaKnown RBP21.68■■□□□ 1.06
SPAST-203ENST00000615843 MYD88Q99836 296 aa21.68■■□□□ 1.06
SPAST-203ENST00000615843 GIGYF2Q6Y7W6 1299 aaKnown RBP21.68■■□□□ 1.06
SPAST-203ENST00000615843 C16orf71Q8IYS4 520 aaPredicted RBP21.68■■□□□ 1.06
SPAST-203ENST00000615843 MYRIPQ8NFW9 859 aa21.68■■□□□ 1.06
SPAST-203ENST00000615843 RHPN1Q8TCX5 695 aa21.68■■□□□ 1.06
SPAST-203ENST00000615843 KCNG4Q8TDN1 519 aa21.68■■□□□ 1.06
SPAST-203ENST00000615843 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.67■■□□□ 1.06
SPAST-203ENST00000615843 HSPA4P34932 840 aa21.67■■□□□ 1.06
SPAST-203ENST00000615843 TMEM132AQ24JP5 1023 aa21.67■■□□□ 1.06
SPAST-203ENST00000615843 SYT10Q6XYQ8 523 aa21.67■■□□□ 1.06
SPAST-203ENST00000615843 C10orf67Q8IYJ2 551 aa21.67■■□□□ 1.06
SPAST-203ENST00000615843 RASSF4Q9H2L5 321 aa21.67■■□□□ 1.06
SPAST-203ENST00000615843 VPS18Q9P253 973 aa21.67■■□□□ 1.06
SPAST-203ENST00000615843 IFIT3O14879 490 aaKnown RBP21.67■■□□□ 1.06
SPAST-203ENST00000615843 GSTTP1A0A1W2PQM5 241 aa21.66■■□□□ 1.06
SPAST-203ENST00000615843 SSR1P43307 286 aaKnown RBP21.66■■□□□ 1.06
SPAST-203ENST00000615843 TCEANC2Q96MN5 208 aa21.66■■□□□ 1.06
SPAST-203ENST00000615843 GTF3C6Q969F1 213 aa21.66■■□□□ 1.06
SPAST-203ENST00000615843 MINDY4BA8MYZ0 360 aa21.66■■□□□ 1.06
SPAST-203ENST00000615843 CTCFLQ8NI51 663 aaPredicted RBP21.66■■□□□ 1.06
SPAST-203ENST00000615843 NPHP3Q7Z494 1330 aa21.65■■□□□ 1.06
SPAST-203ENST00000615843 ADGRF5Q8IZF2 1346 aa21.65■■□□□ 1.06
SPAST-203ENST00000615843 CETN2P41208 172 aa21.65■■□□□ 1.06
SPAST-203ENST00000615843 ERO1AQ96HE7 468 aa21.65■■□□□ 1.06
SPAST-203ENST00000615843 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.65■■□□□ 1.06
SPAST-203ENST00000615843 HSP90AA4PQ58FG1 418 aa21.65■■□□□ 1.06
SPAST-203ENST00000615843 RIOK3O14730 519 aaKnown RBP21.65■■□□□ 1.06
SPAST-203ENST00000615843 ATP2C2O75185 946 aa21.65■■□□□ 1.06
SPAST-203ENST00000615843 ZNF445P59923 1031 aa21.65■■□□□ 1.06
SPAST-203ENST00000615843 RBM8AQ9Y5S9 174 aaKnown RBP21.65■■□□□ 1.06
SPAST-203ENST00000615843 FAM83GA6ND36 823 aa21.64■■□□□ 1.06
SPAST-203ENST00000615843 TMCO5BA8MYB1 307 aa21.64■■□□□ 1.06
SPAST-203ENST00000615843 U2AF2P26368 475 aaKnown RBP eCLIP21.64■■□□□ 1.06
SPAST-203ENST00000615843 KDM2BQ8NHM5 1336 aa21.64■■□□□ 1.05
SPAST-203ENST00000615843 LMOD1P29536 600 aaPredicted RBP21.64■■□□□ 1.05
SPAST-203ENST00000615843 ABCF2Q9UG63 623 aa21.64■■□□□ 1.05
SPAST-203ENST00000615843 EBAG9O00559 213 aa21.64■■□□□ 1.05
SPAST-203ENST00000615843 MRPL50Q8N5N7 158 aaKnown RBP21.64■■□□□ 1.05
SPAST-203ENST00000615843 DBF4Q9UBU7 674 aaPredicted RBP21.64■■□□□ 1.05
SPAST-203ENST00000615843 CTAGE9A4FU28 777 aa21.63■■□□□ 1.05
SPAST-203ENST00000615843 NBPF11Q86T75 865 aa21.63■■□□□ 1.05
SPAST-203ENST00000615843 CTAGE1Q96RT6 745 aa21.63■■□□□ 1.05
SPAST-203ENST00000615843 ASXL1Q8IXJ9 1541 aa21.63■■□□□ 1.05
SPAST-203ENST00000615843 GOLIM4O00461 696 aa21.63■■□□□ 1.05
SPAST-203ENST00000615843 OPA1O60313 960 aa21.63■■□□□ 1.05
SPAST-203ENST00000615843 USP26Q9BXU7 913 aa21.63■■□□□ 1.05
SPAST-203ENST00000615843 METAP2P50579 478 aaKnown RBP eCLIP21.62■■□□□ 1.05
SPAST-203ENST00000615843 PIP4K2BP78356 416 aa21.62■■□□□ 1.05
SPAST-203ENST00000615843 GABPB1Q06547 395 aaPredicted RBP21.62■■□□□ 1.05
SPAST-203ENST00000615843 RAB11FIP4Q86YS3 637 aa21.62■■□□□ 1.05
SPAST-203ENST00000615843 FAM114A1Q8IWE2 563 aa21.62■■□□□ 1.05
SPAST-203ENST00000615843 TAOK3Q9H2K8 898 aa21.62■■□□□ 1.05
SPAST-203ENST00000615843 USP5P45974 858 aa21.62■■□□□ 1.05
SPAST-203ENST00000615843 ATRIPQ8WXE1 791 aa21.62■■□□□ 1.05
SPAST-203ENST00000615843 ZBTB40Q9NUA8 1239 aa21.62■■□□□ 1.05
SPAST-203ENST00000615843 AK2P54819 239 aa21.62■■□□□ 1.05
SPAST-203ENST00000615843 TUBB4BP68371 445 aa21.62■■□□□ 1.05
SPAST-203ENST00000615843 MICU3Q86XE3 530 aa21.62■■□□□ 1.05
SPAST-203ENST00000615843 PYM1Q9BRP8 204 aaKnown RBP21.62■■□□□ 1.05
SPAST-203ENST00000615843 CYB5RLQ6IPT4 315 aa21.61■■□□□ 1.05
SPAST-203ENST00000615843 CCDC144CPQ8IYA2 1237 aa21.61■■□□□ 1.05
SPAST-203ENST00000615843 DCTPP1Q9H773 170 aa21.61■■□□□ 1.05
SPAST-203ENST00000615843 CCDC194A0A1B0GVG4 234 aa21.61■■□□□ 1.05
SPAST-203ENST00000615843 NLRP5P59047 1200 aa21.61■■□□□ 1.05
SPAST-203ENST00000615843 AKR1B10O60218 316 aa21.61■■□□□ 1.05
SPAST-203ENST00000615843 CYLC1P35663 651 aaPredicted RBP21.61■■□□□ 1.05
SPAST-203ENST00000615843 HAND2P61296 217 aa21.61■■□□□ 1.05
SPAST-203ENST00000615843 ARHGEF11O15085 1522 aa21.61■■□□□ 1.05
SPAST-203ENST00000615843 RTL1A6NKG5 1358 aa21.61■■□□□ 1.05
SPAST-203ENST00000615843 PHACTR2O75167 634 aa21.61■■□□□ 1.05
SPAST-203ENST00000615843 UBE4AQ14139 1066 aa21.61■■□□□ 1.05
SPAST-203ENST00000615843 WAPLQ7Z5K2 1190 aa21.61■■□□□ 1.05
SPAST-203ENST00000615843 PIK3R4Q99570 1358 aa21.6■■□□□ 1.05
SPAST-203ENST00000615843 FAM69CQ0P6D2 419 aa21.6■■□□□ 1.05
SPAST-203ENST00000615843 PLEKHM2Q8IWE5 1019 aa21.6■■□□□ 1.05
SPAST-203ENST00000615843 NCOA7Q8NI08 942 aa21.6■■□□□ 1.05
SPAST-203ENST00000615843 RNF41Q9H4P4 317 aaPredicted RBP21.6■■□□□ 1.05
SPAST-203ENST00000615843 IQCA1Q86XH1 822 aa21.6■■□□□ 1.05
SPAST-203ENST00000615843 LRRC2Q9BYS8 371 aa21.6■■□□□ 1.05
SPAST-203ENST00000615843 HYPKQ9NX55 129 aa21.6■■□□□ 1.05
SPAST-203ENST00000615843 IFNKQ9P0W0 207 aa21.6■■□□□ 1.05
SPAST-203ENST00000615843 TRIM21P19474 475 aaKnown RBP21.6■■□□□ 1.05
SPAST-203ENST00000615843 RAB34Q9BZG1 259 aa21.6■■□□□ 1.05
SPAST-203ENST00000615843 SEC63Q9UGP8 760 aaKnown RBP21.6■■□□□ 1.05
SPAST-203ENST00000615843 MAP3K12Q12852 859 aa21.59■■□□□ 1.05
SPAST-203ENST00000615843 TMEM67Q5HYA8 995 aa21.59■■□□□ 1.05
SPAST-203ENST00000615843 TOPBP1Q92547 1522 aa21.59■■□□□ 1.05
SPAST-203ENST00000615843 NOP2P46087 812 aaKnown RBP21.59■■□□□ 1.05
SPAST-203ENST00000615843 KRBA2Q6ZNG9 492 aa21.59■■□□□ 1.05
SPAST-203ENST00000615843 ANKRD36BQ8N2N9 1353 aa21.59■■□□□ 1.05
SPAST-203ENST00000615843 ZNF76P36508 570 aa21.59■■□□□ 1.05
SPAST-203ENST00000615843 SPAG1Q07617 926 aa21.59■■□□□ 1.05
SPAST-203ENST00000615843 SLC26A6Q9BXS9 759 aa21.59■■□□□ 1.05
SPAST-203ENST00000615843 KLF18A0A0U1RQI7 1052 aa21.58■■□□□ 1.05
SPAST-203ENST00000615843 RANBP6O60518 1105 aaKnown RBP21.58■■□□□ 1.05
SPAST-203ENST00000615843 TRIM47Q96LD4 638 aa21.58■■□□□ 1.05
SPAST-203ENST00000615843 IGHMBP2P38935 993 aaKnown RBP21.58■■□□□ 1.05
SPAST-203ENST00000615843 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms