RNA–Protein interactions for RNA: ENST00000615729.4

UBXN8-207, Transcript of UBX domain protein 8, humanhuman

TSL 1 (best) BASIC

Gene UBXN8, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-207ENST00000615729 ZNF790Q6PG37 636 aa13.58□□□□□ -0.24
UBXN8-207ENST00000615729 CCDC24Q8N4L8 307 aa13.58□□□□□ -0.24
UBXN8-207ENST00000615729 ZNF496Q96IT1 587 aaPredicted RBP13.58□□□□□ -0.24
UBXN8-207ENST00000615729 ZNF277Q9NRM2 450 aaPredicted RBP13.58□□□□□ -0.24
UBXN8-207ENST00000615729 BMP2KQ9NSY1 1161 aaPredicted RBP13.58□□□□□ -0.24
UBXN8-207ENST00000615729 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.24
UBXN8-207ENST00000615729 MTHFSDQ2M296 383 aaKnown RBP13.57□□□□□ -0.24
UBXN8-207ENST00000615729 GRIPAP1Q4V328 841 aa13.57□□□□□ -0.24
UBXN8-207ENST00000615729 CC2D2BQ6DHV5 1058 aa13.57□□□□□ -0.24
UBXN8-207ENST00000615729 HHIPL1Q96JK4 782 aa13.57□□□□□ -0.24
UBXN8-207ENST00000615729 PSMD1Q99460 953 aa13.57□□□□□ -0.24
UBXN8-207ENST00000615729 PANK3Q9H999 370 aa13.57□□□□□ -0.24
UBXN8-207ENST00000615729 ANKRD31Q8N7Z5 1873 aa13.57□□□□□ -0.24
UBXN8-207ENST00000615729 POTEFA5A3E0 1075 aa13.56□□□□□ -0.24
UBXN8-207ENST00000615729 MAP3K13O43283 966 aa13.56□□□□□ -0.24
UBXN8-207ENST00000615729 ALDH1B1P30837 517 aa13.56□□□□□ -0.24
UBXN8-207ENST00000615729 TPTE2Q6XPS3 522 aa13.56□□□□□ -0.24
UBXN8-207ENST00000615729 NBPF5PQ86XG9 351 aaPredicted RBP13.56□□□□□ -0.24
UBXN8-207ENST00000615729 MIER1Q8N108 512 aa13.56□□□□□ -0.24
UBXN8-207ENST00000615729 JDP2Q8WYK2 163 aa13.56□□□□□ -0.24
UBXN8-207ENST00000615729 TLL2Q9Y6L7 1015 aa13.56□□□□□ -0.24
UBXN8-207ENST00000615729 RNF123Q5XPI4 1314 aa13.56□□□□□ -0.24
UBXN8-207ENST00000615729 THSD7BQ9C0I4 1608 aa13.55□□□□□ -0.24
UBXN8-207ENST00000615729 TIE1P35590 1138 aa13.55□□□□□ -0.24
UBXN8-207ENST00000615729 CST9Q5W186 159 aa13.55□□□□□ -0.24
UBXN8-207ENST00000615729 USP50Q70EL3 339 aaPredicted RBP13.55□□□□□ -0.24
UBXN8-207ENST00000615729 SYNE4Q8N205 404 aa13.55□□□□□ -0.24
UBXN8-207ENST00000615729 FMNL2Q96PY5 1086 aa13.55□□□□□ -0.24
UBXN8-207ENST00000615729 SCUBE2Q9NQ36 999 aa13.55□□□□□ -0.24
UBXN8-207ENST00000615729 TRPC6Q9Y210 931 aa13.55□□□□□ -0.24
UBXN8-207ENST00000615729 ZNF652Q9Y2D9 606 aa13.55□□□□□ -0.24
UBXN8-207ENST00000615729 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
UBXN8-207ENST00000615729 COL11A2P13942 1736 aaPredicted RBP13.54□□□□□ -0.24
UBXN8-207ENST00000615729 LMOD1P29536 600 aaPredicted RBP13.54□□□□□ -0.24
UBXN8-207ENST00000615729 BRPF1P55201 1214 aaPredicted RBP13.54□□□□□ -0.24
UBXN8-207ENST00000615729 DZIP3Q86Y13 1208 aaKnown RBP13.54□□□□□ -0.24
UBXN8-207ENST00000615729 MCOLN1Q9GZU1 580 aa13.54□□□□□ -0.24
UBXN8-207ENST00000615729 A1BGP04217 495 aa13.53□□□□□ -0.24
UBXN8-207ENST00000615729 EIF6P56537 245 aaKnown RBP13.53□□□□□ -0.24
UBXN8-207ENST00000615729 TEFQ10587 303 aa13.53□□□□□ -0.24
UBXN8-207ENST00000615729 CYP4F22Q6NT55 531 aa13.53□□□□□ -0.24
UBXN8-207ENST00000615729 RASEFQ8IZ41 740 aa13.53□□□□□ -0.24
UBXN8-207ENST00000615729 SCN7AQ01118 1682 aa13.53□□□□□ -0.24
UBXN8-207ENST00000615729 LCE2DQ5TA82 110 aaPredicted RBP13.52□□□□□ -0.25
UBXN8-207ENST00000615729 SAPCD2Q86UD0 394 aa13.52□□□□□ -0.25
UBXN8-207ENST00000615729 IL17REQ8NFR9 667 aa13.52□□□□□ -0.25
UBXN8-207ENST00000615729 ZNF330Q9Y3S2 320 aaPredicted RBP13.52□□□□□ -0.25
UBXN8-207ENST00000615729 SNED1Q8TER0 1413 aa13.52□□□□□ -0.25
UBXN8-207ENST00000615729 PDE4DIPQ5VU43 2346 aa13.51□□□□□ -0.25
UBXN8-207ENST00000615729 UBR2Q8IWV8 1755 aa13.51□□□□□ -0.25
UBXN8-207ENST00000615729 ARFGEF2Q9Y6D5 1785 aa13.51□□□□□ -0.25
UBXN8-207ENST00000615729 HMOX1P09601 288 aa13.51□□□□□ -0.25
UBXN8-207ENST00000615729 SCNN1DP51172 638 aa13.51□□□□□ -0.25
UBXN8-207ENST00000615729 CRY2Q49AN0 593 aa13.51□□□□□ -0.25
UBXN8-207ENST00000615729 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
UBXN8-207ENST00000615729 POLR3GLQ9BT43 218 aa13.51□□□□□ -0.25
UBXN8-207ENST00000615729 KNSTRNQ9Y448 316 aa13.51□□□□□ -0.25
UBXN8-207ENST00000615729 GNAT3A8MTJ3 354 aa13.5□□□□□ -0.25
UBXN8-207ENST00000615729 GAS2L2Q8NHY3 880 aa13.5□□□□□ -0.25
UBXN8-207ENST00000615729 VPS33BQ9H267 617 aa13.5□□□□□ -0.25
UBXN8-207ENST00000615729 PGAP2Q9UHJ9 254 aa13.5□□□□□ -0.25
UBXN8-207ENST00000615729 DIAPH1O60610 1272 aaKnown RBP13.49□□□□□ -0.25
UBXN8-207ENST00000615729 HOXA10P31260 410 aaPredicted RBP13.49□□□□□ -0.25
UBXN8-207ENST00000615729 EPS15P42566 896 aa13.49□□□□□ -0.25
UBXN8-207ENST00000615729 OLFM4Q6UX06 510 aa13.49□□□□□ -0.25
UBXN8-207ENST00000615729 ADARB2Q9NS39 739 aaKnown RBP13.49□□□□□ -0.25
UBXN8-207ENST00000615729 GJA3Q9Y6H8 435 aa13.49□□□□□ -0.25
UBXN8-207ENST00000615729 CEMIPQ8WUJ3 1361 aa13.48□□□□□ -0.25
UBXN8-207ENST00000615729 DGKZQ13574 1117 aa13.48□□□□□ -0.25
UBXN8-207ENST00000615729 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
UBXN8-207ENST00000615729 ZC3H15Q8WU90 426 aaKnown RBP13.48□□□□□ -0.25
UBXN8-207ENST00000615729 FAM163AQ96GL9 167 aaPredicted RBP13.48□□□□□ -0.25
UBXN8-207ENST00000615729 NIP7Q9Y221 180 aaKnown RBP eCLIP13.48□□□□□ -0.25
UBXN8-207ENST00000615729 TRAF5O00463 557 aa13.47□□□□□ -0.25
UBXN8-207ENST00000615729 AOC2O75106 756 aa13.47□□□□□ -0.25
UBXN8-207ENST00000615729 FMR1Q06787 632 aaKnown RBP eCLIP13.47□□□□□ -0.25
UBXN8-207ENST00000615729 NOGQ13253 232 aa13.47□□□□□ -0.25
UBXN8-207ENST00000615729 CFAP44Q96MT7 982 aa13.47□□□□□ -0.25
UBXN8-207ENST00000615729 USP16Q9Y5T5 823 aa13.47□□□□□ -0.25
UBXN8-207ENST00000615729 KIF7Q2M1P5 1343 aa13.46□□□□□ -0.25
UBXN8-207ENST00000615729 SNRPA1P09661 255 aaKnown RBP13.46□□□□□ -0.25
UBXN8-207ENST00000615729 GRM1Q13255 1194 aa13.46□□□□□ -0.25
UBXN8-207ENST00000615729 PRPF38BQ5VTL8 546 aaKnown RBP13.46□□□□□ -0.25
UBXN8-207ENST00000615729 LARGE2Q8N3Y3 721 aa13.46□□□□□ -0.25
UBXN8-207ENST00000615729 NYXQ9GZU5 481 aa13.46□□□□□ -0.25
UBXN8-207ENST00000615729 GPRC5DQ9NZD1 345 aa13.46□□□□□ -0.25
UBXN8-207ENST00000615729 TSKSQ9UJT2 592 aa13.46□□□□□ -0.25
UBXN8-207ENST00000615729 CDHR2Q9BYE9 1310 aa13.45□□□□□ -0.26
UBXN8-207ENST00000615729 TTLL13PA6NNM8 815 aa13.45□□□□□ -0.26
UBXN8-207ENST00000615729 BTBD11A6QL63 1104 aa13.45□□□□□ -0.26
UBXN8-207ENST00000615729 CELF2O95319 508 aaKnown RBP13.45□□□□□ -0.26
UBXN8-207ENST00000615729 EIF4G2P78344 907 aaKnown RBP eCLIP13.45□□□□□ -0.26
UBXN8-207ENST00000615729 SAGE1Q9NXZ1 904 aa13.45□□□□□ -0.26
UBXN8-207ENST00000615729 LTBP1Q14766 1721 aa13.44□□□□□ -0.26
UBXN8-207ENST00000615729 TNRC18O15417 2968 aaPredicted RBP13.44□□□□□ -0.26
UBXN8-207ENST00000615729 GTF2E1P29083 439 aaPredicted RBP13.44□□□□□ -0.26
UBXN8-207ENST00000615729 CRAMP1Q96RY5 1269 aa13.44□□□□□ -0.26
UBXN8-207ENST00000615729 RIC1Q4ADV7 1423 aa13.44□□□□□ -0.26
UBXN8-207ENST00000615729 ERVV-1B6SEH8 477 aa13.43□□□□□ -0.26
UBXN8-207ENST00000615729 CIAPIN1Q6FI81 312 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms