RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ZC3H12CQ9C0D7 883 aaKnown RBP11.1□□□□□ -0.63
CLTCL1-208ENST00000615606 PHAXQ9H814 394 aaKnown RBP11.1□□□□□ -0.63
CLTCL1-208ENST00000615606 SYNMO15061 1565 aa11.1□□□□□ -0.63
CLTCL1-208ENST00000615606 SH3TC1Q8TE82 1336 aa11.1□□□□□ -0.63
CLTCL1-208ENST00000615606 BAG6P46379 1132 aa11.1□□□□□ -0.63
CLTCL1-208ENST00000615606 METTL22Q9BUU2 404 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-208ENST00000615606 NUCB1Q02818 461 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 CABP5Q9NP86 173 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 FAM13BQ9NYF5 915 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 PLA2R1Q13018 1463 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 ZNF76P36508 570 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 EPS15P42566 896 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 CEBPZQ03701 1054 aaKnown RBP11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 TMEM132AQ24JP5 1023 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 OGFOD1Q8N543 542 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 CCDC191Q8NCU4 936 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 CFAP45Q9UL16 551 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 CIZ1Q9ULV3 898 aaPredicted RBP11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 ANKARQ7Z5J8 1434 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 KIAA0232Q92628 1395 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 PHKG2P15735 406 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 ARHGEF25Q86VW2 580 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 CARD10Q9BWT7 1032 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 SLC12A7Q9Y666 1083 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 IFIT3O14879 490 aaKnown RBP11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 ME1P48163 572 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 CCDC96Q2M329 555 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.09□□□□□ -0.632e-6■■■□□ 16.5
CLTCL1-208ENST00000615606 HMG20BQ9P0W2 317 aa11.09□□□□□ -0.63
CLTCL1-208ENST00000615606 WWC2Q6AWC2 1192 aa11.08□□□□□ -0.64
CLTCL1-208ENST00000615606 DNAJC10Q8IXB1 793 aa11.08□□□□□ -0.64
CLTCL1-208ENST00000615606 TRIM35Q9UPQ4 493 aa11.08□□□□□ -0.64
CLTCL1-208ENST00000615606 APBA3O96018 575 aa11.08□□□□□ -0.64
CLTCL1-208ENST00000615606 CATIPQ7Z7H3 387 aa11.08□□□□□ -0.64
CLTCL1-208ENST00000615606 UPF3BQ9BZI7 483 aaKnown RBP11.08□□□□□ -0.64
CLTCL1-208ENST00000615606 NSFL1CQ9UNZ2 370 aaKnown RBP11.08□□□□□ -0.64
CLTCL1-208ENST00000615606 CYP7A1P22680 504 aa11.08□□□□□ -0.64
CLTCL1-208ENST00000615606 ZNF772Q68DY9 489 aaPredicted RBP11.08□□□□□ -0.64
CLTCL1-208ENST00000615606 KIF24Q5T7B8 1368 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 PRPF40AO75400 957 aaKnown RBP11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 JDP2Q8WYK2 163 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 CEP131Q9UPN4 1083 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 UNC13BO14795 1591 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 IGHDP01880 384 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 NAA16Q6N069 864 aaPredicted RBP11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 IL27Q8NEV9 243 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 PIBF1Q8WXW3 757 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 CEP85Q6P2H3 762 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 MFSD6Q6ZSS7 791 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 ZNF496Q96IT1 587 aaPredicted RBP11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 FEZ1Q99689 392 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 TTC41PQ6P2S7 1318 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 A1BGP04217 495 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 PDE1AP54750 535 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 PPP4R3BQ5MIZ7 849 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 PCDHB15Q9Y5E8 787 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 PRR36Q9H6K5 1346 aa11.07□□□□□ -0.64
CLTCL1-208ENST00000615606 TSPY2A6NKD2 308 aa11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 EIF4A1P60842 406 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 HMGN5P82970 282 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 DDX11Q96FC9 970 aa11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 BMP2KQ9NSY1 1161 aaPredicted RBP11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 PA2G4Q9UQ80 394 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 PDE8AO60658 829 aa11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 QTRT2Q9H974 415 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 GOLGA8AA7E2F4 631 aa11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 GOLGA8BA8MQT2 603 aa11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 KIF5BP33176 963 aa11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 TNIP1Q15025 636 aa11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 NFKBIBQ15653 356 aa11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 CCDC178Q5BJE1 867 aa11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 TBC1D9Q6ZT07 1266 aa11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 CCDC83Q8IWF9 413 aa11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 NCOA7Q8NI08 942 aa11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 FLAD1Q8NFF5 587 aa11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 BICC1Q9H694 974 aaKnown RBP11.06□□□□□ -0.64
CLTCL1-208ENST00000615606 PLCG2P16885 1265 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 STIM1Q13586 685 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 TSHZ3Q63HK5 1081 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 FAM89AQ96GI7 184 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 SPATA32Q96LK8 384 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 DCTPP1Q9H773 170 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 MAGEC2Q9UBF1 373 aaPredicted RBP11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 IQSEC3Q9UPP2 1182 aaPredicted RBP11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 LIMCH1Q9UPQ0 1083 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 WDR17Q8IZU2 1322 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 ADGRB3O60242 1522 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 RNF17Q9BXT8 1623 aaKnown RBP11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 CDC42BPBQ9Y5S2 1711 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 G2E3Q7L622 706 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 CUL5Q93034 780 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 DACH1Q9UI36 760 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 BRINP3Q76B58 766 aa11.05□□□□□ -0.64
CLTCL1-208ENST00000615606 PDE4CQ08493 712 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 TMEM67Q5HYA8 995 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 KAT14Q9H8E8 782 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 EHMT1Q9H9B1 1298 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 ZBTB40Q9NUA8 1239 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 PAG1Q9NWQ8 432 aa11.04□□□□□ -0.64
CLTCL1-208ENST00000615606 ERBB4Q15303 1308 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms