RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CDCA7LQ96GN5 454 aa11.4□□□□□ -0.58
TNFRSF9-204ENST00000615230 ECHDC1Q9NTX5 307 aa11.4□□□□□ -0.58
TNFRSF9-204ENST00000615230 ABCA9Q8IUA7 1624 aa11.4□□□□□ -0.58
TNFRSF9-204ENST00000615230 SSRP1Q08945 709 aaKnown RBP11.4□□□□□ -0.59
TNFRSF9-204ENST00000615230 NAP1L4Q99733 375 aaKnown RBP11.4□□□□□ -0.59
TNFRSF9-204ENST00000615230 SPINK5Q9NQ38 1064 aaPredicted RBP11.4□□□□□ -0.59
TNFRSF9-204ENST00000615230 FOSBP53539 338 aa11.39□□□□□ -0.59
TNFRSF9-204ENST00000615230 ATP2B3Q16720 1220 aa11.39□□□□□ -0.59
TNFRSF9-204ENST00000615230 TMC4Q7Z404 712 aa11.39□□□□□ -0.59
TNFRSF9-204ENST00000615230 PLBD2Q8NHP8 589 aa11.39□□□□□ -0.59
TNFRSF9-204ENST00000615230 ABCC3O15438 1527 aa11.39□□□□□ -0.59
TNFRSF9-204ENST00000615230 IRS4O14654 1257 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF9-204ENST00000615230 POLKQ9UBT6 870 aa11.39□□□□□ -0.59
TNFRSF9-204ENST00000615230 WDR78Q5VTH9 848 aa11.39□□□□□ -0.59
TNFRSF9-204ENST00000615230 CWC27Q6UX04 472 aaKnown RBP11.39□□□□□ -0.59
TNFRSF9-204ENST00000615230 UBE3BQ7Z3V4 1068 aa11.39□□□□□ -0.59
TNFRSF9-204ENST00000615230 FGFR1OPO95684 399 aaKnown RBP11.39□□□□□ -0.59
TNFRSF9-204ENST00000615230 LINS1Q8NG48 757 aa11.39□□□□□ -0.59
TNFRSF9-204ENST00000615230 GRM8O00222 908 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 HMGN5P82970 282 aaKnown RBP11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 SLC52A2Q9HAB3 445 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 CHPF2Q9P2E5 772 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 ZRANB1Q9UGI0 708 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 RANBP6O60518 1105 aaKnown RBP11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 COPS6Q7L5N1 327 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 TSG101Q99816 390 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 ZNHIT6Q9NWK9 470 aaKnown RBP11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 CDC42BPGQ6DT37 1551 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 CALM1P0DP23 149 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 CALM2P0DP24 149 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 CALM3P0DP25 149 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 DPY19L2Q6NUT2 758 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 MFSD6Q6ZSS7 791 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 APBB1IPQ7Z5R6 666 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 JAKMIP1Q96N16 626 aaKnown RBP11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 PI4KAP2A4QPH2 592 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 TCIRG1Q13488 830 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 MTHFSDQ2M296 383 aaKnown RBP11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 NUTM1Q86Y26 1132 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 PI4KAP1Q8N8J0 262 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 GGA1Q9UJY5 639 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 NIM1KQ8IY84 436 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 ERBB4Q15303 1308 aa11.38□□□□□ -0.59
TNFRSF9-204ENST00000615230 CBFA2T2O43439 604 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 NAA16Q6N069 864 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 SSH1Q8WYL5 1049 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 PDCL3Q9H2J4 239 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 MBD5Q9P267 1494 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 NFATC2IPQ8NCF5 419 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 CCDC148Q8NFR7 591 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 RTL9Q8NET4 1388 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 ORAI2Q96SN7 254 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 EYA1Q99502 592 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 IL1RAPL2Q9NP60 686 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 MAP3K4Q9Y6R4 1608 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 MAP3K19Q56UN5 1328 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 TMOD4Q9NZQ9 345 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 TSPY2A6NKD2 308 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 PDE8AO60658 829 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 NAP1L1P55209 391 aaKnown RBP11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 KRT85P78386 507 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 CCDC191Q8NCU4 936 aa11.37□□□□□ -0.59
TNFRSF9-204ENST00000615230 GLI2P10070 1586 aa11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 NLGN1Q8N2Q7 840 aa11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 THUMPD2Q9BTF0 503 aaKnown RBP11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 TSPY3P0CV98 308 aa11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 TSPY8P0CW00 308 aa11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 TTC6Q86TZ1 520 aa11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 NCOA7Q8NI08 942 aa11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 GZF1Q9H116 711 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 ATP5J2-PTCD1G3V325 749 aa11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 UNC5CLQ8IV45 518 aa11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 PAF1Q8N7H5 531 aa11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 PICK1Q9NRD5 415 aa11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 KRT27Q7Z3Y8 459 aa11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 TNPO1Q92973 898 aaKnown RBP11.36□□□□□ -0.59
TNFRSF9-204ENST00000615230 LDHBP07195 334 aaKnown RBP11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 GRIPAP1Q4V328 841 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 ERMNQ8TAM6 284 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 CNKSR1Q969H4 720 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 CARD10Q9BWT7 1032 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 MAGEB6P1A0A0J9YX57 407 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 MAP4K4O95819 1239 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 DDX21Q9NR30 783 aaKnown RBP eCLIP11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 CCDC194A0A1B0GVG4 234 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 SPDYE4A6NLX3 237 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 GOLGA8AA7E2F4 631 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 GOLGA8BA8MQT2 603 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 AMPD3Q01432 767 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 BOLA2Q9H3K6 86 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 SH3TC1Q8TE82 1336 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 IFIT3O14879 490 aaKnown RBP11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 BMP15O95972 392 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 TBC1D22AQ8WUA7 517 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 ESR2Q92731 530 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 SBNO2Q9Y2G9 1366 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 CYP7A1P22680 504 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 STK11IPQ8N1F8 1099 aa11.35□□□□□ -0.59
TNFRSF9-204ENST00000615230 PNMA2Q9UL42 364 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms