RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 UTRNP46939 3433 aa10.19□□□□□ -0.78
PCDH9-205ENST00000614931 SERPINB2P05120 415 aa10.18□□□□□ -0.78
PCDH9-205ENST00000614931 IGKV5-2P06315 115 aa10.18□□□□□ -0.78
PCDH9-205ENST00000614931 MS4A1P11836 297 aa10.18□□□□□ -0.78
PCDH9-205ENST00000614931 BEND3Q5T5X7 828 aa10.18□□□□□ -0.78
PCDH9-205ENST00000614931 PLBD2Q8NHP8 589 aa10.18□□□□□ -0.78
PCDH9-205ENST00000614931 PIM2Q9P1W9 311 aa10.18□□□□□ -0.78
PCDH9-205ENST00000614931 TBC1D2BQ9UPU7 963 aa10.18□□□□□ -0.78
PCDH9-205ENST00000614931 BCS1LQ9Y276 419 aa10.18□□□□□ -0.78
PCDH9-205ENST00000614931 ARFGEF1Q9Y6D6 1849 aa10.18□□□□□ -0.78
PCDH9-205ENST00000614931 LAMB2P55268 1798 aa10.17□□□□□ -0.78
PCDH9-205ENST00000614931 MAP3K15Q6ZN16 1313 aa10.17□□□□□ -0.78
PCDH9-205ENST00000614931 CAMTA2O94983 1202 aa10.17□□□□□ -0.78
PCDH9-205ENST00000614931 DDX58O95786 925 aaKnown RBP10.17□□□□□ -0.78
PCDH9-205ENST00000614931 CHRNA5P30532 468 aa10.17□□□□□ -0.78
PCDH9-205ENST00000614931 HLFQ16534 295 aa10.17□□□□□ -0.78
PCDH9-205ENST00000614931 TBC1D9BQ66K14 1250 aa10.17□□□□□ -0.78
PCDH9-205ENST00000614931 ANKRD13DQ6ZTN6 518 aa10.17□□□□□ -0.78
PCDH9-205ENST00000614931 RIC3Q7Z5B4 369 aa10.17□□□□□ -0.78
PCDH9-205ENST00000614931 DZIP3Q86Y13 1208 aaKnown RBP10.17□□□□□ -0.78
PCDH9-205ENST00000614931 MEIS3Q99687 375 aa10.17□□□□□ -0.78
PCDH9-205ENST00000614931 MYD88Q99836 296 aa10.17□□□□□ -0.78
PCDH9-205ENST00000614931 METTL22Q9BUU2 404 aaPredicted RBP10.17□□□□□ -0.78
PCDH9-205ENST00000614931 MYH3P11055 1940 aa10.17□□□□□ -0.78
PCDH9-205ENST00000614931 DDX60Q8IY21 1712 aaKnown RBP10.16□□□□□ -0.78
PCDH9-205ENST00000614931 ZBTB7BO15156 539 aaPredicted RBP10.16□□□□□ -0.78
PCDH9-205ENST00000614931 CCT4P50991 539 aaKnown RBP10.16□□□□□ -0.78
PCDH9-205ENST00000614931 CWF19L2Q2TBE0 894 aaKnown RBP10.16□□□□□ -0.78
PCDH9-205ENST00000614931 BICDL1Q6ZP65 573 aa10.16□□□□□ -0.78
PCDH9-205ENST00000614931 NPM2Q86SE8 214 aaKnown RBP10.16□□□□□ -0.78
PCDH9-205ENST00000614931 DLEC1Q9Y238 1755 aa10.16□□□□□ -0.78
PCDH9-205ENST00000614931 NEURL1BA8MQ27 555 aa10.15□□□□□ -0.78
PCDH9-205ENST00000614931 ATP5J2-PTCD1G3V325 749 aa10.15□□□□□ -0.78
PCDH9-205ENST00000614931 RGL2O15211 777 aa10.15□□□□□ -0.78
PCDH9-205ENST00000614931 DALRD3Q5D0E6 543 aaKnown RBP10.15□□□□□ -0.78
PCDH9-205ENST00000614931 GIGYF2Q6Y7W6 1299 aaKnown RBP10.15□□□□□ -0.78
PCDH9-205ENST00000614931 KIF6Q6ZMV9 814 aa10.15□□□□□ -0.78
PCDH9-205ENST00000614931 ARHGAP27Q6ZUM4 889 aa10.15□□□□□ -0.78
PCDH9-205ENST00000614931 SRCIN1Q9C0H9 1055 aa10.15□□□□□ -0.78
PCDH9-205ENST00000614931 C1orf115Q9H7X2 142 aa10.15□□□□□ -0.78
PCDH9-205ENST00000614931 ZBTB40Q9NUA8 1239 aa10.15□□□□□ -0.78
PCDH9-205ENST00000614931 DDX19BQ9UMR2 479 aa10.15□□□□□ -0.78
PCDH9-205ENST00000614931 ANKRD31Q8N7Z5 1873 aa10.15□□□□□ -0.79
PCDH9-205ENST00000614931 CARMIL3Q8ND23 1372 aa10.14□□□□□ -0.79
PCDH9-205ENST00000614931 C1QTNF8P60827 252 aa10.14□□□□□ -0.79
PCDH9-205ENST00000614931 PRR5LQ6MZQ0 368 aa10.14□□□□□ -0.79
PCDH9-205ENST00000614931 CLEC4GQ6UXB4 293 aa10.14□□□□□ -0.79
PCDH9-205ENST00000614931 LINS1Q8NG48 757 aa10.14□□□□□ -0.79
PCDH9-205ENST00000614931 SETDB2Q96T68 719 aa10.14□□□□□ -0.79
PCDH9-205ENST00000614931 ISCA1Q9BUE6 129 aa10.14□□□□□ -0.79
PCDH9-205ENST00000614931 BRIP1Q9BX63 1249 aa10.14□□□□□ -0.79
PCDH9-205ENST00000614931 USP44Q9H0E7 712 aa10.14□□□□□ -0.79
PCDH9-205ENST00000614931 PCDHB15Q9Y5E8 787 aa10.14□□□□□ -0.79
PCDH9-205ENST00000614931 UBN2Q6ZU65 1347 aa10.13□□□□□ -0.79
PCDH9-205ENST00000614931 ERVV-1B6SEH8 477 aa10.13□□□□□ -0.79
PCDH9-205ENST00000614931 ALDH1L1O75891 902 aa10.13□□□□□ -0.79
PCDH9-205ENST00000614931 TCIRG1Q13488 830 aa10.13□□□□□ -0.79
PCDH9-205ENST00000614931 GCKRQ14397 625 aa10.13□□□□□ -0.79
PCDH9-205ENST00000614931 ERICH6BQ5W0A0 696 aa10.13□□□□□ -0.79
PCDH9-205ENST00000614931 C2CD5Q86YS7 1000 aa10.13□□□□□ -0.79
PCDH9-205ENST00000614931 PDZRN3Q9UPQ7 1066 aa10.13□□□□□ -0.79
PCDH9-205ENST00000614931 IBTKQ9P2D0 1353 aaPredicted RBP10.13□□□□□ -0.79
PCDH9-205ENST00000614931 H0YIN7 160 aa10.12□□□□□ -0.79
PCDH9-205ENST00000614931 NBPF7P0C2Y1 421 aaPredicted RBP10.12□□□□□ -0.79
PCDH9-205ENST00000614931 GPTP24298 496 aa10.12□□□□□ -0.79
PCDH9-205ENST00000614931 CASP7P55210 303 aa10.12□□□□□ -0.79
PCDH9-205ENST00000614931 ZNF34Q8IZ26 560 aa10.12□□□□□ -0.79
PCDH9-205ENST00000614931 JARID2Q92833 1246 aaPredicted RBP10.12□□□□□ -0.79
PCDH9-205ENST00000614931 GPBP1L1Q9HC44 474 aaPredicted RBP10.12□□□□□ -0.79
PCDH9-205ENST00000614931 PPP4R2Q9NY27 417 aa10.12□□□□□ -0.79
PCDH9-205ENST00000614931 ZNF652Q9Y2D9 606 aa10.12□□□□□ -0.79
PCDH9-205ENST00000614931 TNRC6CQ9HCJ0 1690 aaKnown RBP10.12□□□□□ -0.79
PCDH9-205ENST00000614931 UTYO14607 1347 aa10.11□□□□□ -0.79
PCDH9-205ENST00000614931 PDE6BP35913 854 aa10.11□□□□□ -0.79
PCDH9-205ENST00000614931 NEXNQ0ZGT2 675 aa10.11□□□□□ -0.79
PCDH9-205ENST00000614931 B4GALNT3Q6L9W6 998 aa10.11□□□□□ -0.79
PCDH9-205ENST00000614931 NLRP10Q86W26 655 aa10.11□□□□□ -0.79
PCDH9-205ENST00000614931 TTLL6Q8N841 843 aa10.11□□□□□ -0.79
PCDH9-205ENST00000614931 CNBD1Q8NA66 436 aa10.11□□□□□ -0.79
PCDH9-205ENST00000614931 ZNF526Q8TF50 670 aaPredicted RBP10.11□□□□□ -0.79
PCDH9-205ENST00000614931 KAZALD1Q96I82 304 aa10.11□□□□□ -0.79
PCDH9-205ENST00000614931 LRRFIP2Q9Y608 721 aaKnown RBP10.11□□□□□ -0.79
PCDH9-205ENST00000614931 SPEF2Q9C093 1822 aa10.11□□□□□ -0.79
PCDH9-205ENST00000614931 SBF1O95248 1867 aa10.1□□□□□ -0.79
PCDH9-205ENST00000614931 TAF1P21675 1872 aa10.1□□□□□ -0.79
PCDH9-205ENST00000614931 COL11A2P13942 1736 aaPredicted RBP10.1□□□□□ -0.79
PCDH9-205ENST00000614931 GRM8O00222 908 aa10.1□□□□□ -0.79
PCDH9-205ENST00000614931 TRIM28Q13263 835 aaKnown RBP10.1□□□□□ -0.79
PCDH9-205ENST00000614931 C9orf131Q5VYM1 1079 aa10.1□□□□□ -0.79
PCDH9-205ENST00000614931 SIRT2Q8IXJ6 389 aa10.1□□□□□ -0.79
PCDH9-205ENST00000614931 SYNE4Q8N205 404 aa10.1□□□□□ -0.79
PCDH9-205ENST00000614931 CCDC24Q8N4L8 307 aa10.1□□□□□ -0.79
PCDH9-205ENST00000614931 CCDC191Q8NCU4 936 aa10.1□□□□□ -0.79
PCDH9-205ENST00000614931 SUCLG2Q96I99 432 aa10.1□□□□□ -0.79
PCDH9-205ENST00000614931 CWC25Q9NXE8 425 aaPredicted RBP10.1□□□□□ -0.79
PCDH9-205ENST00000614931 COL4A1P02462 1669 aa10.09□□□□□ -0.79
PCDH9-205ENST00000614931 H7C1W4 665 aa10.09□□□□□ -0.79
PCDH9-205ENST00000614931 IGHDP01880 384 aa10.09□□□□□ -0.79
PCDH9-205ENST00000614931 GNAI3P08754 354 aa10.09□□□□□ -0.79
PCDH9-205ENST00000614931 UBTFL1P0CB47 393 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms