RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 PPP4R2Q9NY27 417 aa7.85□□□□□ -1.15
CBWD3-210ENST00000614398 STK32BQ9NY57 414 aa7.85□□□□□ -1.15
CBWD3-210ENST00000614398 RTL9Q8NET4 1388 aa7.85□□□□□ -1.15
CBWD3-210ENST00000614398 HSP90B1P14625 803 aaKnown RBP7.85□□□□□ -1.15
CBWD3-210ENST00000614398 NLRP10Q86W26 655 aa7.85□□□□□ -1.15
CBWD3-210ENST00000614398 PKNOX2Q96KN3 472 aa7.85□□□□□ -1.15
CBWD3-210ENST00000614398 PNPLA7Q6ZV29 1317 aa7.85□□□□□ -1.15
CBWD3-210ENST00000614398 KIF13BQ9NQT8 1826 aa7.85□□□□□ -1.15
CBWD3-210ENST00000614398 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.84□□□□□ -1.15
CBWD3-210ENST00000614398 HDAC1Q13547 482 aaPredicted RBP7.84□□□□□ -1.15
CBWD3-210ENST00000614398 FKBP8Q14318 412 aa7.84□□□□□ -1.15
CBWD3-210ENST00000614398 HLFQ16534 295 aa7.84□□□□□ -1.15
CBWD3-210ENST00000614398 AMIGO3Q86WK7 504 aa7.84□□□□□ -1.15
CBWD3-210ENST00000614398 RPAP2Q8IXW5 612 aaPredicted RBP7.84□□□□□ -1.15
CBWD3-210ENST00000614398 SLC16A10Q8TF71 515 aa7.84□□□□□ -1.15
CBWD3-210ENST00000614398 ZBTB3Q9H5J0 574 aa7.84□□□□□ -1.15
CBWD3-210ENST00000614398 CARMIL3Q8ND23 1372 aa7.84□□□□□ -1.15
CBWD3-210ENST00000614398 ZPR1O75312 459 aa7.84□□□□□ -1.15
CBWD3-210ENST00000614398 GNAI2P04899 355 aa7.84□□□□□ -1.15
CBWD3-210ENST00000614398 KCNQ4P56696 695 aa7.84□□□□□ -1.15
CBWD3-210ENST00000614398 RABL6Q3YEC7 729 aaPredicted RBP7.84□□□□□ -1.15
CBWD3-210ENST00000614398 SLC4A10Q6U841 1118 aa7.84□□□□□ -1.15
CBWD3-210ENST00000614398 ZBTB38Q8NAP3 1195 aaPredicted RBP7.84□□□□□ -1.15
CBWD3-210ENST00000614398 MEIS3Q99687 375 aa7.84□□□□□ -1.15
CBWD3-210ENST00000614398 UBN2Q6ZU65 1347 aa7.84□□□□□ -1.15
CBWD3-210ENST00000614398 NTSR2O95665 410 aa7.83□□□□□ -1.16
CBWD3-210ENST00000614398 GYS1P13807 737 aa7.83□□□□□ -1.16
CBWD3-210ENST00000614398 TM4SF1P30408 202 aa7.83□□□□□ -1.16
CBWD3-210ENST00000614398 RFC4P35249 363 aa7.83□□□□□ -1.16
CBWD3-210ENST00000614398 SLC10A5Q5PT55 438 aa7.83□□□□□ -1.16
CBWD3-210ENST00000614398 ANKRD44Q8N8A2 993 aa7.83□□□□□ -1.16
CBWD3-210ENST00000614398 NYXQ9GZU5 481 aa7.83□□□□□ -1.16
CBWD3-210ENST00000614398 TBC1D2BQ9UPU7 963 aa7.83□□□□□ -1.16
CBWD3-210ENST00000614398 UBTFL1P0CB47 393 aaPredicted RBP7.83□□□□□ -1.16
CBWD3-210ENST00000614398 CWF19L2Q2TBE0 894 aaKnown RBP7.83□□□□□ -1.16
CBWD3-210ENST00000614398 USPL1Q5W0Q7 1092 aa7.83□□□□□ -1.16
CBWD3-210ENST00000614398 PPP1R42Q7Z4L9 355 aa7.83□□□□□ -1.16
CBWD3-210ENST00000614398 DLEC1Q9Y238 1755 aa7.82□□□□□ -1.16
CBWD3-210ENST00000614398 KDM2BQ8NHM5 1336 aa7.82□□□□□ -1.16
CBWD3-210ENST00000614398 POLA2Q14181 598 aa7.82□□□□□ -1.16
CBWD3-210ENST00000614398 COL23A1Q86Y22 540 aaPredicted RBP7.82□□□□□ -1.16
CBWD3-210ENST00000614398 NLGN1Q8N2Q7 840 aa7.82□□□□□ -1.16
CBWD3-210ENST00000614398 TFCP2L1Q9NZI6 479 aa7.82□□□□□ -1.16
CBWD3-210ENST00000614398 TNRC6CQ9HCJ0 1690 aaKnown RBP7.82□□□□□ -1.16
CBWD3-210ENST00000614398 CEP85Q6P2H3 762 aa7.82□□□□□ -1.16
CBWD3-210ENST00000614398 DEFB132Q7Z7B7 95 aa7.82□□□□□ -1.16
CBWD3-210ENST00000614398 UTP14AQ9BVJ6 771 aaKnown RBP7.82□□□□□ -1.16
CBWD3-210ENST00000614398 C9orf78Q9NZ63 289 aaPredicted RBP7.82□□□□□ -1.16
CBWD3-210ENST00000614398 RBM19Q9Y4C8 960 aaKnown RBP7.82□□□□□ -1.16
CBWD3-210ENST00000614398 ANKRD31Q8N7Z5 1873 aa7.82□□□□□ -1.16
CBWD3-210ENST00000614398 SH3TC1Q8TE82 1336 aa7.81□□□□□ -1.16
CBWD3-210ENST00000614398 ATP8B2P98198 1209 aa7.81□□□□□ -1.16
CBWD3-210ENST00000614398 SSH3Q8TE77 659 aa7.81□□□□□ -1.16
CBWD3-210ENST00000614398 KAZALD1Q96I82 304 aa7.81□□□□□ -1.16
CBWD3-210ENST00000614398 SRP68Q9UHB9 627 aaKnown RBP7.81□□□□□ -1.16
CBWD3-210ENST00000614398 A0A1B0GUL6 1792 aa7.81□□□□□ -1.16
CBWD3-210ENST00000614398 LRRC37AA6NMS7 1700 aa7.81□□□□□ -1.16
CBWD3-210ENST00000614398 CSF1RP07333 972 aa7.81□□□□□ -1.16
CBWD3-210ENST00000614398 NBPF7P0C2Y1 421 aaPredicted RBP7.81□□□□□ -1.16
CBWD3-210ENST00000614398 DEKP35659 375 aaKnown RBP7.81□□□□□ -1.16
CBWD3-210ENST00000614398 TBC1D9BQ66K14 1250 aa7.81□□□□□ -1.16
CBWD3-210ENST00000614398 FBXO3Q9UK99 471 aa7.81□□□□□ -1.16
CBWD3-210ENST00000614398 NIP7Q9Y221 180 aaKnown RBP eCLIP7.81□□□□□ -1.16
CBWD3-210ENST00000614398 PCDHB15Q9Y5E8 787 aa7.81□□□□□ -1.16
CBWD3-210ENST00000614398 ATP5J2-PTCD1G3V325 749 aa7.8□□□□□ -1.16
CBWD3-210ENST00000614398 HMMRO75330 724 aa7.8□□□□□ -1.16
CBWD3-210ENST00000614398 IRX6P78412 446 aaPredicted RBP7.8□□□□□ -1.16
CBWD3-210ENST00000614398 FOXO4P98177 505 aa7.8□□□□□ -1.16
CBWD3-210ENST00000614398 NFIXQ14938 502 aa7.8□□□□□ -1.16
CBWD3-210ENST00000614398 SUSD4Q5VX71 490 aa7.8□□□□□ -1.16
CBWD3-210ENST00000614398 SUCLG2Q96I99 432 aa7.8□□□□□ -1.16
CBWD3-210ENST00000614398 SETDB2Q96T68 719 aa7.8□□□□□ -1.16
CBWD3-210ENST00000614398 RWDD1Q9H446 243 aaPredicted RBP7.8□□□□□ -1.16
CBWD3-210ENST00000614398 ZNF330Q9Y3S2 320 aaPredicted RBP7.8□□□□□ -1.16
CBWD3-210ENST00000614398 LRRFIP2Q9Y608 721 aaKnown RBP7.8□□□□□ -1.16
CBWD3-210ENST00000614398 KIAA1551Q9HCM1 1747 aa7.8□□□□□ -1.16
CBWD3-210ENST00000614398 KLRG2A4D1S0 409 aaPredicted RBP7.8□□□□□ -1.16
CBWD3-210ENST00000614398 CENPQQ7L2Z9 268 aaPredicted RBP7.8□□□□□ -1.16
CBWD3-210ENST00000614398 PDZRN3Q9UPQ7 1066 aa7.8□□□□□ -1.16
CBWD3-210ENST00000614398 NOP58Q9Y2X3 529 aaKnown RBP7.8□□□□□ -1.16
CBWD3-210ENST00000614398 EP400Q96L91 3159 aa7.8□□□□□ -1.16
CBWD3-210ENST00000614398 POLRMTO00411 1230 aaKnown RBP7.79□□□□□ -1.16
CBWD3-210ENST00000614398 PDE8AO60658 829 aa7.79□□□□□ -1.16
CBWD3-210ENST00000614398 SF3B3Q15393 1217 aaKnown RBP7.79□□□□□ -1.16
CBWD3-210ENST00000614398 PPP4R3CPQ6ZMV5 832 aa7.79□□□□□ -1.16
CBWD3-210ENST00000614398 UBE3BQ7Z3V4 1068 aa7.79□□□□□ -1.16
CBWD3-210ENST00000614398 SIRT2Q8IXJ6 389 aa7.79□□□□□ -1.16
CBWD3-210ENST00000614398 SMC5Q8IY18 1101 aa7.79□□□□□ -1.16
CBWD3-210ENST00000614398 C10orf71Q711Q0 1435 aa7.79□□□□□ -1.16
CBWD3-210ENST00000614398 ARAP2Q8WZ64 1704 aa7.79□□□□□ -1.16
CBWD3-210ENST00000614398 PHF14O94880 888 aa7.79□□□□□ -1.16
CBWD3-210ENST00000614398 ILDR2Q71H61 639 aa7.79□□□□□ -1.16
CBWD3-210ENST00000614398 GCC1Q96CN9 775 aa7.79□□□□□ -1.16
CBWD3-210ENST00000614398 DCTPP1Q9H773 170 aa7.79□□□□□ -1.16
CBWD3-210ENST00000614398 TRMT112Q9UI30 125 aaKnown RBP7.79□□□□□ -1.16
CBWD3-210ENST00000614398 COL11A2P13942 1736 aaPredicted RBP7.78□□□□□ -1.16
CBWD3-210ENST00000614398 RFX5P48382 616 aaPredicted RBP7.78□□□□□ -1.16
CBWD3-210ENST00000614398 CTSWP56202 376 aa7.78□□□□□ -1.16
CBWD3-210ENST00000614398 DDR1Q08345 913 aa7.78□□□□□ -1.16
CBWD3-210ENST00000614398 TPTE2Q6XPS3 522 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms