RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 CD46P15529 392 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 RBM5P52756 815 aaKnown RBP eCLIP3.67□□□□□ -1.82
CBWD3-209ENST00000614377 WDR4P57081 412 aaKnown RBP3.67□□□□□ -1.82
CBWD3-209ENST00000614377 SH3BP2P78314 561 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 RASSF7Q02833 373 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 NNTQ13423 1086 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 RASA3Q14644 834 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 C6orf118Q5T5N4 469 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 B4GALNT3Q6L9W6 998 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 OGFOD1Q8N543 542 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 ACRBPQ8NEB7 543 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 TBC1D22AQ8WUA7 517 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 ERCC4Q92889 916 aaPredicted RBP3.67□□□□□ -1.82
CBWD3-209ENST00000614377 TBC1D2Q9BYX2 928 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 SUDS3Q9H7L9 328 aaPredicted RBP3.67□□□□□ -1.82
CBWD3-209ENST00000614377 KNSTRNQ9Y448 316 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 KIF3AQ9Y496 699 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 NINLQ9Y2I6 1382 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 HSP90AB1P08238 724 aaKnown RBP3.67□□□□□ -1.82
CBWD3-209ENST00000614377 PSMC1P62191 440 aaKnown RBP3.67□□□□□ -1.82
CBWD3-209ENST00000614377 TSNAXIP1Q2TAA8 658 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 MAP9Q49MG5 647 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 DNAJC21Q5F1R6 531 aaKnown RBP3.67□□□□□ -1.82
CBWD3-209ENST00000614377 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 CCDC174Q6PII3 467 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 PIK3R5Q8WYR1 880 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 AGBL1Q96MI9 1066 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 RPS6KC1Q96S38 1066 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 PAGR1Q9BTK6 254 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 MMTAG2Q9BU76 263 aaKnown RBP3.67□□□□□ -1.82
CBWD3-209ENST00000614377 INO80BQ9C086 356 aaPredicted RBP3.67□□□□□ -1.82
CBWD3-209ENST00000614377 LNPKQ9C0E8 428 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 NUCKS1Q9H1E3 243 aaKnown RBP3.67□□□□□ -1.82
CBWD3-209ENST00000614377 ZNF232Q9UNY5 417 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 COG6Q9Y2V7 657 aa3.67□□□□□ -1.82
CBWD3-209ENST00000614377 ATG7O95352 703 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 ALDH1B1P30837 517 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 FLT3P36888 993 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 TRPC1P48995 793 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 HSP90B2PQ58FF3 399 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 LRCH2Q5VUJ6 765 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 GPAT2Q6NUI2 795 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 NPAS4Q8IUM7 802 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 MICALL1Q8N3F8 863 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 RETREG1Q9H6L5 497 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 SUFUQ9UMX1 484 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 BAZ1BQ9UIG0 1483 aaKnown RBP3.66□□□□□ -1.82
CBWD3-209ENST00000614377 CCDC196A0A1B0GTZ2 297 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 CCDC66A2RUB6 948 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 SPDYE5A6NIY4 337 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 TPM3P06753 285 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 VSIG8P0DPA2 414 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 GTF2A1P52655 376 aaPredicted RBP3.66□□□□□ -1.82
CBWD3-209ENST00000614377 ANKRD13BQ86YJ7 626 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 C1orf131Q8NDD1 294 aaKnown RBP3.66□□□□□ -1.82
CBWD3-209ENST00000614377 ZNF396Q96N95 335 aaPredicted RBP3.66□□□□□ -1.82
CBWD3-209ENST00000614377 SLC26A8Q96RN1 970 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 LZTS2Q9BRK4 669 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 C22orf23Q9BZE7 217 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 IFT122Q9HBG6 1241 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 SPC25Q9HBM1 224 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 GABBR1Q9UBS5 961 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 SMARCA2P51531 1590 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 TIMM44O43615 452 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 POU5F1BQ06416 359 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 GABPB1Q06547 395 aaPredicted RBP3.66□□□□□ -1.82
CBWD3-209ENST00000614377 RNF187Q5TA31 235 aaPredicted RBP3.66□□□□□ -1.82
CBWD3-209ENST00000614377 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.66□□□□□ -1.82
CBWD3-209ENST00000614377 DRC7Q8IY82 874 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 PDILTQ8N807 584 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 TNPO1Q92973 898 aaKnown RBP3.66□□□□□ -1.82
CBWD3-209ENST00000614377 ARMC5Q96C12 935 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 KRTAP4-5Q9BYR2 181 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 TMX4Q9H1E5 349 aaPredicted RBP3.66□□□□□ -1.82
CBWD3-209ENST00000614377 PUF60Q9UHX1 559 aaKnown RBP3.66□□□□□ -1.82
CBWD3-209ENST00000614377 ATP1B4Q9UN42 357 aaPredicted RBP3.66□□□□□ -1.82
CBWD3-209ENST00000614377 TBX22Q9Y458 520 aa3.66□□□□□ -1.82
CBWD3-209ENST00000614377 ADH1CP00326 375 aa3.65□□□□□ -1.82
CBWD3-209ENST00000614377 TGFB3P10600 412 aa3.65□□□□□ -1.82
CBWD3-209ENST00000614377 COL6A1P12109 1028 aa3.65□□□□□ -1.82
CBWD3-209ENST00000614377 XRCC6P12956 609 aaKnown RBP eCLIP3.65□□□□□ -1.82
CBWD3-209ENST00000614377 TIMP2P16035 220 aa3.65□□□□□ -1.82
CBWD3-209ENST00000614377 MARSP56192 900 aaKnown RBP3.65□□□□□ -1.82
CBWD3-209ENST00000614377 TBX4P57082 545 aa3.65□□□□□ -1.82
CBWD3-209ENST00000614377 ZSCAN26Q16670 478 aa3.65□□□□□ -1.82
CBWD3-209ENST00000614377 TSGA10IPQ3SY00 556 aa3.65□□□□□ -1.82
CBWD3-209ENST00000614377 EFCAB2Q5VUJ9 269 aa3.65□□□□□ -1.82
CBWD3-209ENST00000614377 NUTM2GQ5VZR2 741 aa3.65□□□□□ -1.82
CBWD3-209ENST00000614377 IPO5O00410 1097 aaKnown RBP3.65□□□□□ -1.83
CBWD3-209ENST00000614377 CD53P19397 219 aa3.65□□□□□ -1.83
CBWD3-209ENST00000614377 MDM2Q00987 491 aaPredicted RBP3.65□□□□□ -1.83
CBWD3-209ENST00000614377 MAPRE1Q15691 268 aaKnown RBP3.65□□□□□ -1.83
CBWD3-209ENST00000614377 AMHR2Q16671 573 aa3.65□□□□□ -1.83
CBWD3-209ENST00000614377 PLEKHG6Q3KR16 790 aa3.65□□□□□ -1.83
CBWD3-209ENST00000614377 MORC1Q86VD1 984 aa3.65□□□□□ -1.83
CBWD3-209ENST00000614377 GIPC2Q8TF65 315 aa3.65□□□□□ -1.83
CBWD3-209ENST00000614377 BAP1Q92560 729 aa3.65□□□□□ -1.83
CBWD3-209ENST00000614377 NOL10Q9BSC4 688 aaKnown RBP3.65□□□□□ -1.83
CBWD3-209ENST00000614377 CXorf56Q9H5V9 222 aa3.65□□□□□ -1.83
CBWD3-209ENST00000614377 MAP3K20Q9NYL2 800 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms