RNA–Protein interactions for RNA: ENST00000614256.4

CHTOP-207, Transcript of chromatin target of PRMT1, humanhuman

TSL 3 BASIC

Gene CHTOP, Length 1,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-207ENST00000614256 KAZALD1Q96I82 304 aa23.47■■□□□ 1.35
CHTOP-207ENST00000614256 ANO8Q9HCE9 1232 aaPredicted RBP23.47■■□□□ 1.35
CHTOP-207ENST00000614256 KDM2BQ8NHM5 1336 aa23.46■■□□□ 1.35
CHTOP-207ENST00000614256 RFC4P35249 363 aa23.46■■□□□ 1.35
CHTOP-207ENST00000614256 TFCP2L1Q9NZI6 479 aa23.46■■□□□ 1.35
CHTOP-207ENST00000614256 H7C1W4 665 aa23.45■■□□□ 1.34
CHTOP-207ENST00000614256 ZPR1O75312 459 aa23.45■■□□□ 1.34
CHTOP-207ENST00000614256 RTL5Q5HYW3 569 aaPredicted RBP23.45■■□□□ 1.34
CHTOP-207ENST00000614256 CLEC4GQ6UXB4 293 aa23.45■■□□□ 1.34
CHTOP-207ENST00000614256 SUCLG2Q96I99 432 aa23.45■■□□□ 1.34
CHTOP-207ENST00000614256 COL24A1Q17RW2 1714 aa23.45■■□□□ 1.34
CHTOP-207ENST00000614256 HMGB2P26583 209 aaKnown RBP23.44■■□□□ 1.34
CHTOP-207ENST00000614256 CCDC125Q86Z20 511 aa23.44■■□□□ 1.34
CHTOP-207ENST00000614256 ANKRD44Q8N8A2 993 aa23.44■■□□□ 1.34
CHTOP-207ENST00000614256 ZNF652Q9Y2D9 606 aa23.44■■□□□ 1.34
CHTOP-207ENST00000614256 QSER1Q2KHR3 1735 aa23.44■■□□□ 1.34
CHTOP-207ENST00000614256 TBC1D9BQ66K14 1250 aa23.43■■□□□ 1.34
CHTOP-207ENST00000614256 NIP7Q9Y221 180 aaKnown RBP eCLIP23.43■■□□□ 1.34
CHTOP-207ENST00000614256 HDAC1Q13547 482 aaPredicted RBP23.43■■□□□ 1.34
CHTOP-207ENST00000614256 EPHA10Q5JZY3 1008 aa23.43■■□□□ 1.34
CHTOP-207ENST00000614256 SYNE4Q8N205 404 aa23.43■■□□□ 1.34
CHTOP-207ENST00000614256 MYH3P11055 1940 aa23.42■■□□□ 1.34
CHTOP-207ENST00000614256 RGL2O15211 777 aa23.42■■□□□ 1.34
CHTOP-207ENST00000614256 SUSD4Q5VX71 490 aa23.42■■□□□ 1.34
CHTOP-207ENST00000614256 RPAP2Q8IXW5 612 aaPredicted RBP23.42■■□□□ 1.34
CHTOP-207ENST00000614256 FAM89AQ96GI7 184 aa23.42■■□□□ 1.34
CHTOP-207ENST00000614256 PNMA6EA0A0J9YXQ4 647 aa23.41■■□□□ 1.34
CHTOP-207ENST00000614256 COL23A1Q86Y22 540 aaPredicted RBP23.41■■□□□ 1.34
CHTOP-207ENST00000614256 PNPLA7Q6ZV29 1317 aa23.41■■□□□ 1.34
CHTOP-207ENST00000614256 CASZ1Q86V15 1759 aa23.41■■□□□ 1.34
CHTOP-207ENST00000614256 PCCAP05165 728 aaPredicted RBP23.4■■□□□ 1.34
CHTOP-207ENST00000614256 BICDL1Q6ZP65 573 aa23.4■■□□□ 1.34
CHTOP-207ENST00000614256 RWDD1Q9H446 243 aaPredicted RBP23.4■■□□□ 1.34
CHTOP-207ENST00000614256 BICC1Q9H694 974 aaKnown RBP23.4■■□□□ 1.34
CHTOP-207ENST00000614256 DDX60Q8IY21 1712 aaKnown RBP23.4■■□□□ 1.34
CHTOP-207ENST00000614256 FAM177BA6PVY3 158 aa23.4■■□□□ 1.34
CHTOP-207ENST00000614256 GYS1P13807 737 aa23.4■■□□□ 1.34
CHTOP-207ENST00000614256 SLC15A2Q16348 729 aa23.4■■□□□ 1.34
CHTOP-207ENST00000614256 ZBTB38Q8NAP3 1195 aaPredicted RBP23.4■■□□□ 1.34
CHTOP-207ENST00000614256 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.343e-7■□□□□ 9.9
CHTOP-207ENST00000614256 LAMB2P55268 1798 aa23.39■■□□□ 1.33
CHTOP-207ENST00000614256 ATP8B2P98198 1209 aa23.39■■□□□ 1.33
CHTOP-207ENST00000614256 PARP10Q53GL7 1025 aa23.38■■□□□ 1.33
CHTOP-207ENST00000614256 CENPQQ7L2Z9 268 aaPredicted RBP23.38■■□□□ 1.33
CHTOP-207ENST00000614256 TRMT112Q9UI30 125 aaKnown RBP23.38■■□□□ 1.33
CHTOP-207ENST00000614256 NTSR2O95665 410 aa23.38■■□□□ 1.33
CHTOP-207ENST00000614256 PPP1R42Q7Z4L9 355 aa23.38■■□□□ 1.33
CHTOP-207ENST00000614256 FOXO4P98177 505 aa23.36■■□□□ 1.33
CHTOP-207ENST00000614256 MTX1Q13505 466 aa23.36■■□□□ 1.33
CHTOP-207ENST00000614256 STK32BQ9NY57 414 aa23.36■■□□□ 1.33
CHTOP-207ENST00000614256 UTP14AQ9BVJ6 771 aaKnown RBP23.36■■□□□ 1.33
CHTOP-207ENST00000614256 HDAC5Q9UQL6 1122 aa23.36■■□□□ 1.33
CHTOP-207ENST00000614256 CDHR2Q9BYE9 1310 aa23.35■■□□□ 1.33
CHTOP-207ENST00000614256 MSH5O43196 834 aa23.35■■□□□ 1.33
CHTOP-207ENST00000614256 NFIXQ14938 502 aa23.35■■□□□ 1.33
CHTOP-207ENST00000614256 SRGAP3O43295 1099 aa23.34■■□□□ 1.33
CHTOP-207ENST00000614256 POLA2Q14181 598 aa23.34■■□□□ 1.33
CHTOP-207ENST00000614256 RABL6Q3YEC7 729 aaPredicted RBP23.34■■□□□ 1.33
CHTOP-207ENST00000614256 NUTM1Q86Y26 1132 aa23.34■■□□□ 1.33
CHTOP-207ENST00000614256 SSH3Q8TE77 659 aa23.34■■□□□ 1.33
CHTOP-207ENST00000614256 SETDB2Q96T68 719 aa23.34■■□□□ 1.33
CHTOP-207ENST00000614256 ILDR2Q71H61 639 aa23.33■■□□□ 1.33
CHTOP-207ENST00000614256 FLAD1Q8NFF5 587 aa23.33■■□□□ 1.33
CHTOP-207ENST00000614256 SH3TC1Q8TE82 1336 aa23.33■■□□□ 1.32
CHTOP-207ENST00000614256 IRS4O14654 1257 aaPredicted RBP23.33■■□□□ 1.32
CHTOP-207ENST00000614256 SKAP1Q86WV1 359 aa23.33■■□□□ 1.32
CHTOP-207ENST00000614256 SMC5Q8IY18 1101 aa23.33■■□□□ 1.32
CHTOP-207ENST00000614256 HMMRO75330 724 aa23.32■■□□□ 1.32
CHTOP-207ENST00000614256 LMBR1LQ6UX01 489 aa23.32■■□□□ 1.32
CHTOP-207ENST00000614256 PLA2G12BQ9BX93 195 aa23.32■■□□□ 1.32
CHTOP-207ENST00000614256 DCTPP1Q9H773 170 aa23.31■■□□□ 1.32
CHTOP-207ENST00000614256 HCLS1P14317 486 aaPredicted RBP23.31■■□□□ 1.32
CHTOP-207ENST00000614256 TM4SF1P30408 202 aa23.31■■□□□ 1.32
CHTOP-207ENST00000614256 ERFEQ4G0M1 354 aa23.31■■□□□ 1.32
CHTOP-207ENST00000614256 PDGFDQ9GZP0 370 aaPredicted RBP23.31■■□□□ 1.32
CHTOP-207ENST00000614256 CARMIL3Q8ND23 1372 aa23.3■■□□□ 1.32
CHTOP-207ENST00000614256 ABCC12Q96J65 1359 aa23.3■■□□□ 1.32
CHTOP-207ENST00000614256 NBPF5PQ86XG9 351 aaPredicted RBP23.29■■□□□ 1.32
CHTOP-207ENST00000614256 DDR1Q08345 913 aa23.29■■□□□ 1.32
CHTOP-207ENST00000614256 EXOC6BQ9Y2D4 811 aa23.29■■□□□ 1.32
CHTOP-207ENST00000614256 TNRC6CQ9HCJ0 1690 aaKnown RBP23.28■■□□□ 1.32
CHTOP-207ENST00000614256 PDE8AO60658 829 aa23.28■■□□□ 1.32
CHTOP-207ENST00000614256 RFX5P48382 616 aaPredicted RBP23.28■■□□□ 1.32
CHTOP-207ENST00000614256 CCDC24Q8N4L8 307 aa23.28■■□□□ 1.32
CHTOP-207ENST00000614256 KLHDC4Q8TBB5 520 aa23.28■■□□□ 1.32
CHTOP-207ENST00000614256 GCC1Q96CN9 775 aa23.28■■□□□ 1.32
CHTOP-207ENST00000614256 CCDC85AQ96PX6 553 aaPredicted RBP23.28■■□□□ 1.32
CHTOP-207ENST00000614256 PA2G4Q9UQ80 394 aaKnown RBP23.28■■□□□ 1.32
CHTOP-207ENST00000614256 CSF1RP07333 972 aa23.27■■□□□ 1.32
CHTOP-207ENST00000614256 MSL1Q68DK7 614 aa23.27■■□□□ 1.32
CHTOP-207ENST00000614256 CHMP3Q9Y3E7 222 aa23.27■■□□□ 1.32
CHTOP-207ENST00000614256 TAF1P21675 1872 aa23.27■■□□□ 1.32
CHTOP-207ENST00000614256 CTSWP56202 376 aa23.26■■□□□ 1.31
CHTOP-207ENST00000614256 TTLL11Q8NHH1 800 aa23.26■■□□□ 1.31
CHTOP-207ENST00000614256 PDZRN3Q9UPQ7 1066 aa23.26■■□□□ 1.31
CHTOP-207ENST00000614256 NRXN2Q9P2S2 1712 aa23.26■■□□□ 1.31
CHTOP-207ENST00000614256 C3orf67Q6ZVT6 689 aa23.26■■□□□ 1.31
CHTOP-207ENST00000614256 NYXQ9GZU5 481 aa23.26■■□□□ 1.31
CHTOP-207ENST00000614256 POLRMTO00411 1230 aaKnown RBP23.25■■□□□ 1.31
CHTOP-207ENST00000614256 FAM161AQ3B820 660 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms