RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 A1BGP04217 495 aa19.88■□□□□ 0.77
CNOT3-208ENST00000613073 PKP1Q13835 747 aa19.88■□□□□ 0.77
CNOT3-208ENST00000613073 NBPF14Q5TI25 921 aa19.88■□□□□ 0.77
CNOT3-208ENST00000613073 NBPF10Q6P3W6 841 aaKnown RBP19.88■□□□□ 0.77
CNOT3-208ENST00000613073 NBPF15Q8N660 670 aa19.88■□□□□ 0.77
CNOT3-208ENST00000613073 PARP4Q9UKK3 1724 aaKnown RBP19.88■□□□□ 0.77
CNOT3-208ENST00000613073 ERVV-2B6SEH9 535 aa19.88■□□□□ 0.77
CNOT3-208ENST00000613073 G3BP1Q13283 466 aaKnown RBP eCLIP19.88■□□□□ 0.771e-5■■■■□ 21.3
CNOT3-208ENST00000613073 UBE3BQ7Z3V4 1068 aa19.88■□□□□ 0.77
CNOT3-208ENST00000613073 AACSQ86V21 672 aa19.88■□□□□ 0.77
CNOT3-208ENST00000613073 RNF214Q8ND24 703 aa19.88■□□□□ 0.77
CNOT3-208ENST00000613073 PALD1Q9ULE6 856 aa19.88■□□□□ 0.77
CNOT3-208ENST00000613073 IFIT2P09913 472 aaKnown RBP19.87■□□□□ 0.77
CNOT3-208ENST00000613073 ZKSCAN5Q9Y2L8 839 aa19.87■□□□□ 0.77
CNOT3-208ENST00000613073 SASH1O94885 1247 aa19.87■□□□□ 0.77
CNOT3-208ENST00000613073 ABCA3Q99758 1704 aa19.87■□□□□ 0.77
CNOT3-208ENST00000613073 DYNC1I1O14576 645 aa19.86■□□□□ 0.77
CNOT3-208ENST00000613073 ST18O60284 1047 aa19.86■□□□□ 0.77
CNOT3-208ENST00000613073 TTLL7Q6ZT98 887 aa19.86■□□□□ 0.77
CNOT3-208ENST00000613073 ERC1Q8IUD2 1116 aa19.86■□□□□ 0.77
CNOT3-208ENST00000613073 CNTROBQ8N137 903 aa19.86■□□□□ 0.77
CNOT3-208ENST00000613073 CCDC8Q9H0W5 538 aaPredicted RBP19.86■□□□□ 0.77
CNOT3-208ENST00000613073 ZNF445P59923 1031 aa19.85■□□□□ 0.77
CNOT3-208ENST00000613073 A0A087WZG4 1122 aa19.85■□□□□ 0.77
CNOT3-208ENST00000613073 NKX1-1Q15270 411 aaPredicted RBP19.85■□□□□ 0.77
CNOT3-208ENST00000613073 PRPF40AO75400 957 aaKnown RBP19.84■□□□□ 0.77
CNOT3-208ENST00000613073 NEK4P51957 841 aa19.84■□□□□ 0.77
CNOT3-208ENST00000613073 DNTTIP2Q5QJE6 756 aaKnown RBP19.84■□□□□ 0.77
CNOT3-208ENST00000613073 FAM177BA6PVY3 158 aa19.84■□□□□ 0.77
CNOT3-208ENST00000613073 GLRX3O76003 335 aaKnown RBP19.84■□□□□ 0.77
CNOT3-208ENST00000613073 FOXD4L5Q5VV16 416 aaPredicted RBP19.84■□□□□ 0.77
CNOT3-208ENST00000613073 CWC27Q6UX04 472 aaKnown RBP19.84■□□□□ 0.77
CNOT3-208ENST00000613073 PLBD2Q8NHP8 589 aa19.84■□□□□ 0.77
CNOT3-208ENST00000613073 FOXD4L4Q8WXT5 416 aaPredicted RBP19.84■□□□□ 0.77
CNOT3-208ENST00000613073 EAF2Q96CJ1 260 aaPredicted RBP19.84■□□□□ 0.77
CNOT3-208ENST00000613073 ECHDC1Q9NTX5 307 aa19.84■□□□□ 0.77
CNOT3-208ENST00000613073 ZNF330Q9Y3S2 320 aaPredicted RBP19.83■□□□□ 0.77
CNOT3-208ENST00000613073 TTC41PQ6P2S7 1318 aa19.83■□□□□ 0.77
CNOT3-208ENST00000613073 MCCP23508 829 aa19.83■□□□□ 0.77
CNOT3-208ENST00000613073 SASS6Q6UVJ0 657 aa19.83■□□□□ 0.77
CNOT3-208ENST00000613073 PDLIM2Q96JY6 352 aa19.83■□□□□ 0.77
CNOT3-208ENST00000613073 TLR7Q9NYK1 1049 aaKnown RBP19.83■□□□□ 0.77
CNOT3-208ENST00000613073 HS1BP3Q53T59 392 aa19.83■□□□□ 0.76
CNOT3-208ENST00000613073 ZBTB3Q9H5J0 574 aa19.83■□□□□ 0.76
CNOT3-208ENST00000613073 GLI3P10071 1580 aa19.82■□□□□ 0.76
CNOT3-208ENST00000613073 CBX1P83916 185 aa19.82■□□□□ 0.76
CNOT3-208ENST00000613073 LMBRD1Q9NUN5 540 aa19.82■□□□□ 0.76
CNOT3-208ENST00000613073 KAT6BQ8WYB5 2073 aa19.82■□□□□ 0.76
CNOT3-208ENST00000613073 NHSL1Q5SYE7 1610 aa19.82■□□□□ 0.76
CNOT3-208ENST00000613073 SYCE3A1L190 88 aa19.82■□□□□ 0.76
CNOT3-208ENST00000613073 GPATCH3Q96I76 525 aa19.82■□□□□ 0.76
CNOT3-208ENST00000613073 TMOD3Q9NYL9 352 aa19.82■□□□□ 0.76
CNOT3-208ENST00000613073 PTMAP06454 111 aaKnown RBP19.81■□□□□ 0.76
CNOT3-208ENST00000613073 NOL8Q76FK4 1167 aaKnown RBP19.81■□□□□ 0.76
CNOT3-208ENST00000613073 USP42Q9H9J4 1324 aaKnown RBP19.81■□□□□ 0.76
CNOT3-208ENST00000613073 CSPP1Q1MSJ5 1256 aa19.81■□□□□ 0.76
CNOT3-208ENST00000613073 MTERF4Q7Z6M4 381 aaKnown RBP19.81■□□□□ 0.76
CNOT3-208ENST00000613073 SGSM2O43147 1006 aa19.8■□□□□ 0.76
CNOT3-208ENST00000613073 FGD1P98174 961 aa19.8■□□□□ 0.76
CNOT3-208ENST00000613073 CCDC94Q9BW85 323 aaPredicted RBP19.8■□□□□ 0.76
CNOT3-208ENST00000613073 UPF3BQ9BZI7 483 aaKnown RBP19.8■□□□□ 0.76
CNOT3-208ENST00000613073 ASAP1Q9ULH1 1129 aa19.8■□□□□ 0.76
CNOT3-208ENST00000613073 CHMP3Q9Y3E7 222 aa19.8■□□□□ 0.76
CNOT3-208ENST00000613073 AFDNP55196 1824 aaKnown RBP19.8■□□□□ 0.76
CNOT3-208ENST00000613073 ZGPATQ8N5A5 531 aaKnown RBP19.79■□□□□ 0.76
CNOT3-208ENST00000613073 GPT2Q8TD30 523 aa19.79■□□□□ 0.76
CNOT3-208ENST00000613073 ARFGEF2Q9Y6D5 1785 aa19.79■□□□□ 0.76
CNOT3-208ENST00000613073 SHANK3Q9BYB0 1731 aa19.79■□□□□ 0.76
CNOT3-208ENST00000613073 KCPQ6ZWJ8 1503 aa19.79■□□□□ 0.76
CNOT3-208ENST00000613073 ZSCAN20P17040 1043 aaPredicted RBP19.78■□□□□ 0.76
CNOT3-208ENST00000613073 DMTNQ08495 405 aa19.78■□□□□ 0.76
CNOT3-208ENST00000613073 DIAPH3Q9NSV4 1193 aa19.78■□□□□ 0.76
CNOT3-208ENST00000613073 PIGBQ92521 554 aa19.78■□□□□ 0.76
CNOT3-208ENST00000613073 BOLA2Q9H3K6 86 aa19.78■□□□□ 0.76
CNOT3-208ENST00000613073 NSFL1CQ9UNZ2 370 aaKnown RBP19.78■□□□□ 0.76
CNOT3-208ENST00000613073 LAMB4A4D0S4 1761 aa19.78■□□□□ 0.76
CNOT3-208ENST00000613073 PTPN12Q05209 780 aaKnown RBP19.78■□□□□ 0.76
CNOT3-208ENST00000613073 LMBR1LQ6UX01 489 aa19.77■□□□□ 0.76
CNOT3-208ENST00000613073 RFX5P48382 616 aaPredicted RBP19.77■□□□□ 0.75
CNOT3-208ENST00000613073 TMEM63CQ9P1W3 806 aa19.77■□□□□ 0.75
CNOT3-208ENST00000613073 CASP7P55210 303 aa19.76■□□□□ 0.75
CNOT3-208ENST00000613073 HSPA4P34932 840 aa19.76■□□□□ 0.75
CNOT3-208ENST00000613073 TFCP2Q12800 502 aa19.76■□□□□ 0.75
CNOT3-208ENST00000613073 CCDC39Q9UFE4 941 aa19.76■□□□□ 0.75
CNOT3-208ENST00000613073 UBR2Q8IWV8 1755 aa19.75■□□□□ 0.75
CNOT3-208ENST00000613073 ANAPC15P60006 121 aa19.75■□□□□ 0.75
CNOT3-208ENST00000613073 ZNF830Q96NB3 372 aaPredicted RBP19.75■□□□□ 0.75
CNOT3-208ENST00000613073 LSG1Q9H089 658 aaKnown RBP19.75■□□□□ 0.75
CNOT3-208ENST00000613073 COPRSQ9NQ92 184 aa19.75■□□□□ 0.75
CNOT3-208ENST00000613073 CWC25Q9NXE8 425 aaPredicted RBP19.75■□□□□ 0.75
CNOT3-208ENST00000613073 RABL6Q3YEC7 729 aaPredicted RBP19.75■□□□□ 0.75
CNOT3-208ENST00000613073 CLEC17AQ6ZS10 378 aa19.75■□□□□ 0.75
CNOT3-208ENST00000613073 DNAJC10Q8IXB1 793 aa19.75■□□□□ 0.75
CNOT3-208ENST00000613073 SYTL4Q96C24 671 aaPredicted RBP19.75■□□□□ 0.75
CNOT3-208ENST00000613073 TMX3Q96JJ7 454 aa19.75■□□□□ 0.75
CNOT3-208ENST00000613073 CCDC9Q9Y3X0 531 aaKnown RBP19.75■□□□□ 0.75
CNOT3-208ENST00000613073 EVI5LQ96CN4 794 aa19.74■□□□□ 0.75
CNOT3-208ENST00000613073 RAD50Q92878 1312 aa19.74■□□□□ 0.75
CNOT3-208ENST00000613073 C17orf53Q8N3J3 647 aaPredicted RBP19.74■□□□□ 0.75
CNOT3-208ENST00000613073 TOGARAM1Q9Y4F4 1720 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms