RNA–Protein interactions for RNA: ENST00000612603.1

LINC00272-202, long intergenic non-protein coding RNA 272, humanhuman

TSL 1 (best)

Gene LINC00272, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00272-202ENST00000612603 FLIIQ13045 1269 aa15.21■□□□□ 0.03
LINC00272-202ENST00000612603 DALRD3Q5D0E6 543 aaKnown RBP15.21■□□□□ 0.03
LINC00272-202ENST00000612603 BRIP1Q9BX63 1249 aa15.21■□□□□ 0.03
LINC00272-202ENST00000612603 TRMT112Q9UI30 125 aaKnown RBP15.21■□□□□ 0.03
LINC00272-202ENST00000612603 ABCC12Q96J65 1359 aa15.21■□□□□ 0.02
LINC00272-202ENST00000612603 PI4KAP2A4QPH2 592 aa15.2■□□□□ 0.02
LINC00272-202ENST00000612603 NTSR2O95665 410 aa15.2■□□□□ 0.02
LINC00272-202ENST00000612603 NLRP10Q86W26 655 aa15.2■□□□□ 0.02
LINC00272-202ENST00000612603 PI4KAP1Q8N8J0 262 aa15.2■□□□□ 0.02
LINC00272-202ENST00000612603 KCNA3P22001 575 aa15.19■□□□□ 0.02
LINC00272-202ENST00000612603 NEXNQ0ZGT2 675 aa15.19■□□□□ 0.02
LINC00272-202ENST00000612603 CHD4Q14839 1912 aa15.19■□□□□ 0.02
LINC00272-202ENST00000612603 GRIN3BO60391 1043 aa15.18■□□□□ 0.02
LINC00272-202ENST00000612603 KSR2Q6VAB6 950 aa15.18■□□□□ 0.02
LINC00272-202ENST00000612603 ARHGAP27Q6ZUM4 889 aa15.18■□□□□ 0.02
LINC00272-202ENST00000612603 SYNE4Q8N205 404 aa15.18■□□□□ 0.02
LINC00272-202ENST00000612603 JARID2Q92833 1246 aaPredicted RBP15.18■□□□□ 0.02
LINC00272-202ENST00000612603 METTL22Q9BUU2 404 aaPredicted RBP15.18■□□□□ 0.02
LINC00272-202ENST00000612603 ADCY9O60503 1353 aa15.18■□□□□ 0.02
LINC00272-202ENST00000612603 ARFGEF1Q9Y6D6 1849 aa15.17■□□□□ 0.02
LINC00272-202ENST00000612603 F6X3S4 739 aa15.17■□□□□ 0.02
LINC00272-202ENST00000612603 HCLS1P14317 486 aaPredicted RBP15.17■□□□□ 0.02
LINC00272-202ENST00000612603 TTLL6Q8N841 843 aa15.17■□□□□ 0.02
LINC00272-202ENST00000612603 RPGRQ92834 1020 aaKnown RBP15.17■□□□□ 0.02
LINC00272-202ENST00000612603 FAM89AQ96GI7 184 aa15.17■□□□□ 0.02
LINC00272-202ENST00000612603 SMC4Q9NTJ3 1288 aa15.17■□□□□ 0.02
LINC00272-202ENST00000612603 SH3TC1Q8TE82 1336 aa15.17■□□□□ 0.02
LINC00272-202ENST00000612603 LAMB2P55268 1798 aa15.16■□□□□ 0.02
LINC00272-202ENST00000612603 IBTKQ9P2D0 1353 aaPredicted RBP15.16■□□□□ 0.02
LINC00272-202ENST00000612603 SLC4A10Q6U841 1118 aa15.16■□□□□ 0.02
LINC00272-202ENST00000612603 MASTLQ96GX5 879 aa15.16■□□□□ 0.02
LINC00272-202ENST00000612603 YTHDC1Q96MU7 727 aaKnown RBP15.16■□□□□ 0.02
LINC00272-202ENST00000612603 ISCA1Q9BUE6 129 aa15.16■□□□□ 0.02
LINC00272-202ENST00000612603 SLX4Q8IY92 1834 aa15.15■□□□□ 0.02
LINC00272-202ENST00000612603 SRGNP10124 158 aa15.15■□□□□ 0.02
LINC00272-202ENST00000612603 CWF19L2Q2TBE0 894 aaKnown RBP15.15■□□□□ 0.02
LINC00272-202ENST00000612603 DNAAF4Q8WXU2 420 aa15.15■□□□□ 0.02
LINC00272-202ENST00000612603 SSH1Q8WYL5 1049 aa15.15■□□□□ 0.02
LINC00272-202ENST00000612603 NLRP3Q96P20 1036 aa15.15■□□□□ 0.02
LINC00272-202ENST00000612603 CWC25Q9NXE8 425 aaPredicted RBP15.15■□□□□ 0.02
LINC00272-202ENST00000612603 PDZRN3Q9UPQ7 1066 aa15.15■□□□□ 0.02
LINC00272-202ENST00000612603 ZBED9Q6R2W3 1325 aa15.15■□□□□ 0.02
LINC00272-202ENST00000612603 DDX60Q8IY21 1712 aaKnown RBP15.14■□□□□ 0.01
LINC00272-202ENST00000612603 C21orf2O43822 256 aa15.14■□□□□ 0.01
LINC00272-202ENST00000612603 NPR1P16066 1061 aa15.14■□□□□ 0.01
LINC00272-202ENST00000612603 YY1P25490 414 aa15.14■□□□□ 0.01
LINC00272-202ENST00000612603 C3orf67Q6ZVT6 689 aa15.14■□□□□ 0.01
LINC00272-202ENST00000612603 TRMT2AQ8IZ69 625 aaKnown RBP15.14■□□□□ 0.01
LINC00272-202ENST00000612603 MRPL50Q8N5N7 158 aaKnown RBP15.14■□□□□ 0.01
LINC00272-202ENST00000612603 CNKSR1Q969H4 720 aa15.14■□□□□ 0.01
LINC00272-202ENST00000612603 IRS4O14654 1257 aaPredicted RBP15.13■□□□□ 0.01
LINC00272-202ENST00000612603 STYK1Q6J9G0 422 aa15.13■□□□□ 0.01
LINC00272-202ENST00000612603 PRPF40BQ6NWY9 871 aaKnown RBP15.13■□□□□ 0.01
LINC00272-202ENST00000612603 CCDC191Q8NCU4 936 aa15.13■□□□□ 0.01
LINC00272-202ENST00000612603 TAF1P21675 1872 aa15.12■□□□□ 0.01
LINC00272-202ENST00000612603 IGKV5-2P06315 115 aa15.12■□□□□ 0.01
LINC00272-202ENST00000612603 CCDC85AQ96PX6 553 aaPredicted RBP15.12■□□□□ 0.01
LINC00272-202ENST00000612603 RNF123Q5XPI4 1314 aa15.12■□□□□ 0.01
LINC00272-202ENST00000612603 NEURL1BA8MQ27 555 aa15.11■□□□□ 0.01
LINC00272-202ENST00000612603 RASSF7Q02833 373 aa15.11■□□□□ 0.01
LINC00272-202ENST00000612603 ZBTB38Q8NAP3 1195 aaPredicted RBP15.11■□□□□ 0.01
LINC00272-202ENST00000612603 RBM17Q96I25 401 aaKnown RBP15.11■□□□□ 0.01
LINC00272-202ENST00000612603 CCDC88AQ3V6T2 1871 aa15.11■□□□□ 0.01
LINC00272-202ENST00000612603 ALDH1B1P30837 517 aa15.1■□□□□ 0.01
LINC00272-202ENST00000612603 TRIM28Q13263 835 aaKnown RBP15.1■□□□□ 0.01
LINC00272-202ENST00000612603 ALDH1L2Q3SY69 923 aa15.1■□□□□ 0.01
LINC00272-202ENST00000612603 UBE3BQ7Z3V4 1068 aa15.1■□□□□ 0.01
LINC00272-202ENST00000612603 MYH3P11055 1940 aa15.09■□□□□ 0.01
LINC00272-202ENST00000612603 PCCAP05165 728 aaPredicted RBP15.09■□□□□ 0.01
LINC00272-202ENST00000612603 CT47B1P0C2W7 299 aaPredicted RBP15.09■□□□□ 0.01
LINC00272-202ENST00000612603 SLC10A5Q5PT55 438 aa15.09■□□□□ 0.01
LINC00272-202ENST00000612603 OLFM4Q6UX06 510 aa15.09■□□□□ 0.01
LINC00272-202ENST00000612603 DDX46Q7L014 1031 aaKnown RBP15.09■□□□□ 0.01
LINC00272-202ENST00000612603 RIC1Q4ADV7 1423 aa15.09■□□□□ 0.01
LINC00272-202ENST00000612603 KLRG2A4D1S0 409 aaPredicted RBP15.08■□□□□ 0
LINC00272-202ENST00000612603 RARSP54136 660 aaKnown RBP15.08■□□□□ 0
LINC00272-202ENST00000612603 CRY2Q49AN0 593 aa15.08■□□□□ 0
LINC00272-202ENST00000612603 LINS1Q8NG48 757 aa15.08■□□□□ 0
LINC00272-202ENST00000612603 FRAT1Q92837 279 aaPredicted RBP15.08■□□□□ 0
LINC00272-202ENST00000612603 NOB1Q9ULX3 412 aaKnown RBP15.08■□□□□ 0
LINC00272-202ENST00000612603 PTPRCP08575 1304 aa15.08■□□□□ 0
LINC00272-202ENST00000612603 SPEF2Q9C093 1822 aa15.08■□□□□ 0
LINC00272-202ENST00000612603 PPEF1O14829 653 aaPredicted RBP15.07■□□□□ 0
LINC00272-202ENST00000612603 HSP90B1P14625 803 aaKnown RBP15.07■□□□□ 0
LINC00272-202ENST00000612603 GCKRQ14397 625 aa15.07■□□□□ 0
LINC00272-202ENST00000612603 BEND3Q5T5X7 828 aa15.07■□□□□ 0
LINC00272-202ENST00000612603 SLC51AQ86UW1 340 aa15.07■□□□□ 0
LINC00272-202ENST00000612603 SRCIN1Q9C0H9 1055 aa15.07■□□□□ 0
LINC00272-202ENST00000612603 TMX4Q9H1E5 349 aaPredicted RBP15.07■□□□□ 0
LINC00272-202ENST00000612603 C9orf78Q9NZ63 289 aaPredicted RBP15.07■□□□□ 0
LINC00272-202ENST00000612603 ABCC4O15439 1325 aa15.07■□□□□ 0
LINC00272-202ENST00000612603 SBF1O95248 1867 aa15.06■□□□□ 0
LINC00272-202ENST00000612603 PDE8AO60658 829 aa15.06■□□□□ 0
LINC00272-202ENST00000612603 BCAR3O75815 825 aa15.06■□□□□ 0
LINC00272-202ENST00000612603 CCDC93Q567U6 631 aa15.06■□□□□ 0
LINC00272-202ENST00000612603 C9orf131Q5VYM1 1079 aa15.06■□□□□ 0
LINC00272-202ENST00000612603 ZNF526Q8TF50 670 aaPredicted RBP15.06■□□□□ 0
LINC00272-202ENST00000612603 RNF181Q9P0P0 153 aa15.06■□□□□ 0
LINC00272-202ENST00000612603 CHMP3Q9Y3E7 222 aa15.06■□□□□ 0
LINC00272-202ENST00000612603 FER1L6Q2WGJ9 1857 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms