RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 AK7Q96M32 723 aa18.37■□□□□ 0.53
CIT-219ENST00000612548 RTCBQ9Y3I0 505 aaKnown RBP18.37■□□□□ 0.53
CIT-219ENST00000612548 APBA3O96018 575 aa18.36■□□□□ 0.53
CIT-219ENST00000612548 PDE4AP27815 886 aa18.36■□□□□ 0.53
CIT-219ENST00000612548 UBN2Q6ZU65 1347 aa18.36■□□□□ 0.53
CIT-219ENST00000612548 TXNRD1Q16881 649 aa18.35■□□□□ 0.53
CIT-219ENST00000612548 AMIGO3Q86WK7 504 aa18.35■□□□□ 0.53
CIT-219ENST00000612548 ZNF34Q8IZ26 560 aa18.35■□□□□ 0.53
CIT-219ENST00000612548 BCL11AQ9H165 835 aa18.35■□□□□ 0.53
CIT-219ENST00000612548 C4AP0C0L4 1744 aa18.34■□□□□ 0.53
CIT-219ENST00000612548 PCCAP05165 728 aaPredicted RBP18.34■□□□□ 0.53
CIT-219ENST00000612548 FAM89AQ96GI7 184 aa18.34■□□□□ 0.53
CIT-219ENST00000612548 ZBTB47Q9UFB7 747 aaPredicted RBP18.34■□□□□ 0.53
CIT-219ENST00000612548 ZNF652Q9Y2D9 606 aa18.34■□□□□ 0.53
CIT-219ENST00000612548 UBR3Q6ZT12 1888 aa18.34■□□□□ 0.53
CIT-219ENST00000612548 SMARCA5O60264 1052 aaPredicted RBP18.33■□□□□ 0.53
CIT-219ENST00000612548 SURF6O75683 361 aaKnown RBP18.33■□□□□ 0.53
CIT-219ENST00000612548 PHF14O94880 888 aa18.33■□□□□ 0.53
CIT-219ENST00000612548 PROM2Q8N271 834 aa18.33■□□□□ 0.53
CIT-219ENST00000612548 ZBTB38Q8NAP3 1195 aaPredicted RBP18.33■□□□□ 0.53
CIT-219ENST00000612548 PLSCR1O15162 318 aa18.32■□□□□ 0.52
CIT-219ENST00000612548 RABL6Q3YEC7 729 aaPredicted RBP18.32■□□□□ 0.52
CIT-219ENST00000612548 SRP68Q9UHB9 627 aaKnown RBP18.32■□□□□ 0.52
CIT-219ENST00000612548 FOXO4P98177 505 aa18.32■□□□□ 0.52
CIT-219ENST00000612548 ARHGEF1Q92888 912 aaKnown RBP18.32■□□□□ 0.52
CIT-219ENST00000612548 NARFQ9UHQ1 456 aa18.32■□□□□ 0.52
CIT-219ENST00000612548 TRMT112Q9UI30 125 aaKnown RBP18.32■□□□□ 0.52
CIT-219ENST00000612548 PA2G4Q9UQ80 394 aaKnown RBP18.32■□□□□ 0.52
CIT-219ENST00000612548 NIP7Q9Y221 180 aaKnown RBP eCLIP18.32■□□□□ 0.52
CIT-219ENST00000612548 USPL1Q5W0Q7 1092 aa18.31■□□□□ 0.52
CIT-219ENST00000612548 LMBR1LQ6UX01 489 aa18.31■□□□□ 0.52
CIT-219ENST00000612548 CLEC4GQ6UXB4 293 aa18.31■□□□□ 0.52
CIT-219ENST00000612548 SYNE4Q8N205 404 aa18.31■□□□□ 0.52
CIT-219ENST00000612548 CHMP3Q9Y3E7 222 aa18.31■□□□□ 0.52
CIT-219ENST00000612548 FAM177BA6PVY3 158 aa18.3■□□□□ 0.52
CIT-219ENST00000612548 ZPR1O75312 459 aa18.3■□□□□ 0.52
CIT-219ENST00000612548 PARP10Q53GL7 1025 aa18.3■□□□□ 0.52
CIT-219ENST00000612548 TRAPPC3LQ5T215 181 aa18.3■□□□□ 0.52
CIT-219ENST00000612548 SUSD4Q5VX71 490 aa18.3■□□□□ 0.52
CIT-219ENST00000612548 ILDR1Q86SU0 546 aaPredicted RBP18.3■□□□□ 0.52
CIT-219ENST00000612548 LRRCC1Q9C099 1032 aa18.3■□□□□ 0.52
CIT-219ENST00000612548 RGPD3A6NKT7 1758 aaPredicted RBP18.3■□□□□ 0.52
CIT-219ENST00000612548 RGPD4Q7Z3J3 1758 aa18.3■□□□□ 0.52
CIT-219ENST00000612548 CDHR2Q9BYE9 1310 aa18.3■□□□□ 0.52
CIT-219ENST00000612548 BCL2L12Q9HB09 334 aa18.3■□□□□ 0.52
CIT-219ENST00000612548 NOP58Q9Y2X3 529 aaKnown RBP18.3■□□□□ 0.52
CIT-219ENST00000612548 MYH3P11055 1940 aa18.29■□□□□ 0.52
CIT-219ENST00000612548 RAB11FIP3O75154 756 aa18.29■□□□□ 0.52
CIT-219ENST00000612548 OS9Q13438 667 aaPredicted RBP18.29■□□□□ 0.52
CIT-219ENST00000612548 KLHDC4Q8TBB5 520 aa18.29■□□□□ 0.52
CIT-219ENST00000612548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.28■□□□□ 0.52
CIT-219ENST00000612548 IRS4O14654 1257 aaPredicted RBP18.28■□□□□ 0.52
CIT-219ENST00000612548 RFC4P35249 363 aa18.28■□□□□ 0.52
CIT-219ENST00000612548 HSP90AB4PQ58FF6 505 aa18.28■□□□□ 0.52
CIT-219ENST00000612548 C16orf71Q8IYS4 520 aaPredicted RBP18.28■□□□□ 0.52
CIT-219ENST00000612548 UTP14AQ9BVJ6 771 aaKnown RBP18.28■□□□□ 0.52
CIT-219ENST00000612548 PLA2G12BQ9BX93 195 aa18.28■□□□□ 0.52
CIT-219ENST00000612548 USP42Q9H9J4 1324 aaKnown RBP18.28■□□□□ 0.52
CIT-219ENST00000612548 RGL2O15211 777 aa18.27■□□□□ 0.52
CIT-219ENST00000612548 ADRA2BP18089 450 aa18.27■□□□□ 0.52
CIT-219ENST00000612548 RFX5P48382 616 aaPredicted RBP18.27■□□□□ 0.52
CIT-219ENST00000612548 TBC1D9BQ66K14 1250 aa18.27■□□□□ 0.52
CIT-219ENST00000612548 BICDL1Q6ZP65 573 aa18.27■□□□□ 0.52
CIT-219ENST00000612548 SIL1Q9H173 461 aa18.27■□□□□ 0.52
CIT-219ENST00000612548 SH3TC1Q8TE82 1336 aa18.27■□□□□ 0.52
CIT-219ENST00000612548 OTUD7AQ8TE49 926 aaPredicted RBP18.27■□□□□ 0.51
CIT-219ENST00000612548 KIF1BPQ96EK5 621 aa18.27■□□□□ 0.51
CIT-219ENST00000612548 NTSR2O95665 410 aa18.26■□□□□ 0.51
CIT-219ENST00000612548 HMGB2P26583 209 aaKnown RBP18.26■□□□□ 0.51
CIT-219ENST00000612548 RHPN1Q8TCX5 695 aa18.26■□□□□ 0.51
CIT-219ENST00000612548 IL1RAPL2Q9NP60 686 aa18.26■□□□□ 0.51
CIT-219ENST00000612548 TSHZ2Q9NRE2 1034 aa18.26■□□□□ 0.51
CIT-219ENST00000612548 COL24A1Q17RW2 1714 aa18.25■□□□□ 0.51
CIT-219ENST00000612548 DDX60Q8IY21 1712 aaKnown RBP18.25■□□□□ 0.51
CIT-219ENST00000612548 SSFA2P28290 1259 aa18.25■□□□□ 0.51
CIT-219ENST00000612548 PTPN12Q05209 780 aaKnown RBP18.25■□□□□ 0.51
CIT-219ENST00000612548 G3BP1Q13283 466 aaKnown RBP eCLIP18.25■□□□□ 0.51
CIT-219ENST00000612548 ZNF827Q17R98 1081 aa18.25■□□□□ 0.51
CIT-219ENST00000612548 CCDC85AQ96PX6 553 aaPredicted RBP18.25■□□□□ 0.51
CIT-219ENST00000612548 LAMB2P55268 1798 aa18.25■□□□□ 0.51
CIT-219ENST00000612548 TUBGCP6Q96RT7 1819 aa18.25■□□□□ 0.51
CIT-219ENST00000612548 COPRSQ9NQ92 184 aa18.25■□□□□ 0.51
CIT-219ENST00000612548 PDE8AO60658 829 aa18.24■□□□□ 0.51
CIT-219ENST00000612548 CTSWP56202 376 aa18.24■□□□□ 0.51
CIT-219ENST00000612548 FAM161AQ3B820 660 aa18.24■□□□□ 0.51
CIT-219ENST00000612548 NUTM1Q86Y26 1132 aa18.24■□□□□ 0.51
CIT-219ENST00000612548 ERC1Q8IUD2 1116 aa18.24■□□□□ 0.51
CIT-219ENST00000612548 PLEKHM2Q8IWE5 1019 aa18.24■□□□□ 0.51
CIT-219ENST00000612548 HCLS1P14317 486 aaPredicted RBP18.23■□□□□ 0.51
CIT-219ENST00000612548 CSF1RP07333 972 aa18.22■□□□□ 0.51
CIT-219ENST00000612548 EN1Q05925 392 aaPredicted RBP18.22■□□□□ 0.51
CIT-219ENST00000612548 SETDB2Q96T68 719 aa18.22■□□□□ 0.51
CIT-219ENST00000612548 TFCP2L1Q9NZI6 479 aa18.22■□□□□ 0.51
CIT-219ENST00000612548 EZH2Q15910 746 aaKnown RBP18.22■□□□□ 0.51
CIT-219ENST00000612548 CCDC57Q2TAC2 916 aa18.22■□□□□ 0.51
CIT-219ENST00000612548 TTLL11Q8NHH1 800 aa18.22■□□□□ 0.51
CIT-219ENST00000612548 AKT1S1Q96B36 256 aa18.22■□□□□ 0.51
CIT-219ENST00000612548 ZNF594Q96JF6 807 aaPredicted RBP18.22■□□□□ 0.51
CIT-219ENST00000612548 SASH1O94885 1247 aa18.21■□□□□ 0.51
CIT-219ENST00000612548 GREM2Q9H772 168 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms