RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 LRP2BPQ9P2M1 347 aa14.49□□□□□ -0.09
CDH1-212ENST00000611625 SNRPA1P09661 255 aaKnown RBP14.49□□□□□ -0.09
CDH1-212ENST00000611625 PRDM10Q9NQV6 1147 aa14.49□□□□□ -0.09
CDH1-212ENST00000611625 USP16Q9Y5T5 823 aa14.49□□□□□ -0.09
CDH1-212ENST00000611625 KIF24Q5T7B8 1368 aa14.49□□□□□ -0.09
CDH1-212ENST00000611625 GSDMDP57764 484 aa14.48□□□□□ -0.09
CDH1-212ENST00000611625 ANO6Q4KMQ2 910 aa14.48□□□□□ -0.09
CDH1-212ENST00000611625 TRIM34Q9BYJ4 488 aa14.48□□□□□ -0.09
CDH1-212ENST00000611625 LRRC2Q9BYS8 371 aa14.48□□□□□ -0.09
CDH1-212ENST00000611625 SNRKQ9NRH2 765 aa14.48□□□□□ -0.09
CDH1-212ENST00000611625 COPS6Q7L5N1 327 aa14.48□□□□□ -0.09
CDH1-212ENST00000611625 NAPBQ9H115 298 aa14.48□□□□□ -0.09
CDH1-212ENST00000611625 ORC3Q9UBD5 711 aaPredicted RBP14.48□□□□□ -0.09
CDH1-212ENST00000611625 UGGT1Q9NYU2 1555 aa14.48□□□□□ -0.09
CDH1-212ENST00000611625 KRT28Q7Z3Y7 464 aa14.48□□□□□ -0.09
CDH1-212ENST00000611625 ZNHIT6Q9NWK9 470 aaKnown RBP14.48□□□□□ -0.09
CDH1-212ENST00000611625 CWC25Q9NXE8 425 aaPredicted RBP14.48□□□□□ -0.09
CDH1-212ENST00000611625 CWC15Q9P013 229 aaKnown RBP14.48□□□□□ -0.09
CDH1-212ENST00000611625 BIN1O00499 593 aa14.47□□□□□ -0.09
CDH1-212ENST00000611625 HAND2P61296 217 aa14.47□□□□□ -0.09
CDH1-212ENST00000611625 CREB3L3Q68CJ9 461 aa14.47□□□□□ -0.09
CDH1-212ENST00000611625 LMBRD1Q9NUN5 540 aa14.47□□□□□ -0.09
CDH1-212ENST00000611625 STIM1Q13586 685 aa14.47□□□□□ -0.09
CDH1-212ENST00000611625 CWF19L2Q2TBE0 894 aaKnown RBP14.47□□□□□ -0.09
CDH1-212ENST00000611625 CCDC186Q7Z3E2 898 aa14.47□□□□□ -0.09
CDH1-212ENST00000611625 RAI14Q9P0K7 980 aa14.47□□□□□ -0.09
CDH1-212ENST00000611625 CEP131Q9UPN4 1083 aa14.47□□□□□ -0.09
CDH1-212ENST00000611625 NPHP3Q7Z494 1330 aa14.47□□□□□ -0.09
CDH1-212ENST00000611625 TOP1P11387 765 aaKnown RBP14.47□□□□□ -0.09
CDH1-212ENST00000611625 HOXC9P31274 260 aa14.47□□□□□ -0.09
CDH1-212ENST00000611625 PNMA6EA0A0J9YXQ4 647 aa14.46□□□□□ -0.09
CDH1-212ENST00000611625 CPA1P15085 419 aa14.46□□□□□ -0.09
CDH1-212ENST00000611625 SLC39A6Q13433 755 aa14.46□□□□□ -0.09
CDH1-212ENST00000611625 KIAA0232Q92628 1395 aa14.46□□□□□ -0.09
CDH1-212ENST00000611625 TRPM1Q7Z4N2 1603 aa14.46□□□□□ -0.09
CDH1-212ENST00000611625 ZSCAN12O43309 604 aa14.46□□□□□ -0.09
CDH1-212ENST00000611625 SETQ01105 290 aaPredicted RBP14.46□□□□□ -0.09
CDH1-212ENST00000611625 TMOD3Q9NYL9 352 aa14.46□□□□□ -0.09
CDH1-212ENST00000611625 AOX1Q06278 1338 aa14.46□□□□□ -0.09
CDH1-212ENST00000611625 POLR3DP05423 398 aaPredicted RBP14.46□□□□□ -0.09
CDH1-212ENST00000611625 TYRO3Q06418 890 aa14.46□□□□□ -0.09
CDH1-212ENST00000611625 MCMDC2Q4G0Z9 681 aa14.46□□□□□ -0.1
CDH1-212ENST00000611625 Q6ZUG5 572 aa14.46□□□□□ -0.1
CDH1-212ENST00000611625 TMC6Q7Z403 805 aa14.46□□□□□ -0.1
CDH1-212ENST00000611625 LRRC59Q96AG4 307 aaKnown RBP14.46□□□□□ -0.1
CDH1-212ENST00000611625 ANTXR1Q9H6X2 564 aa14.46□□□□□ -0.1
CDH1-212ENST00000611625 CGNQ9P2M7 1197 aaKnown RBP14.46□□□□□ -0.1
CDH1-212ENST00000611625 ERLIN1O75477 346 aa14.45□□□□□ -0.1
CDH1-212ENST00000611625 CDK5RAP3Q96JB5 506 aa14.45□□□□□ -0.1
CDH1-212ENST00000611625 ABCF2Q9UG63 623 aa14.45□□□□□ -0.1
CDH1-212ENST00000611625 SBNO1A3KN83 1393 aa14.45□□□□□ -0.1
CDH1-212ENST00000611625 CCDC171Q6TFL3 1326 aa14.45□□□□□ -0.1
CDH1-212ENST00000611625 IGHMBP2P38935 993 aaKnown RBP14.45□□□□□ -0.1
CDH1-212ENST00000611625 UBE2Q2Q8WVN8 375 aa14.45□□□□□ -0.1
CDH1-212ENST00000611625 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDH1-212ENST00000611625 CCDC196A0A1B0GTZ2 297 aa14.45□□□□□ -0.1
CDH1-212ENST00000611625 GOLGA8AA7E2F4 631 aa14.45□□□□□ -0.1
CDH1-212ENST00000611625 URI1O94763 535 aaPredicted RBP14.45□□□□□ -0.1
CDH1-212ENST00000611625 TMCO3Q6UWJ1 677 aa14.45□□□□□ -0.1
CDH1-212ENST00000611625 RUFY3Q7L099 469 aa14.45□□□□□ -0.1
CDH1-212ENST00000611625 RAD50Q92878 1312 aa14.45□□□□□ -0.1
CDH1-212ENST00000611625 EPS15P42566 896 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 PPP4R3BQ5MIZ7 849 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 CNNM3Q8NE01 707 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 DNAJC25Q9H1X3 360 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 CDC42BPAQ5VT25 1732 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 SGSM2O43147 1006 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 ARHGAP29Q52LW3 1261 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 NOM1Q5C9Z4 860 aaKnown RBP14.44□□□□□ -0.1
CDH1-212ENST00000611625 BABAM1Q9NWV8 329 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 SLC12A7Q9Y666 1083 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 RTL1A6NKG5 1358 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 MAP3K12Q12852 859 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 RAB11FIP4Q86YS3 637 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 CCDC82Q8N4S0 544 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 EPB41L2O43491 1005 aaKnown RBP14.44□□□□□ -0.1
CDH1-212ENST00000611625 LMBR1LQ6UX01 489 aa14.44□□□□□ -0.1
CDH1-212ENST00000611625 IFIT3O14879 490 aaKnown RBP14.43□□□□□ -0.1
CDH1-212ENST00000611625 NCOA7Q8NI08 942 aa14.43□□□□□ -0.1
CDH1-212ENST00000611625 LEKR1Q6ZMV7 388 aa14.43□□□□□ -0.1
CDH1-212ENST00000611625 SNX14Q9Y5W7 946 aa14.43□□□□□ -0.1
CDH1-212ENST00000611625 KLHL10Q6JEL2 608 aa14.43□□□□□ -0.1
CDH1-212ENST00000611625 USP19O94966 1318 aa14.43□□□□□ -0.1
CDH1-212ENST00000611625 KLF18A0A0U1RQI7 1052 aa14.43□□□□□ -0.1
CDH1-212ENST00000611625 ANKRD18BA2A2Z9 1011 aa14.43□□□□□ -0.1
CDH1-212ENST00000611625 MINDY4BA8MYZ0 360 aa14.43□□□□□ -0.1
CDH1-212ENST00000611625 IARSP41252 1262 aaKnown RBP14.43□□□□□ -0.1
CDH1-212ENST00000611625 PAXBP1Q9Y5B6 917 aa14.43□□□□□ -0.1
CDH1-212ENST00000611625 ADCY10Q96PN6 1610 aa14.42□□□□□ -0.1
CDH1-212ENST00000611625 CEP135Q66GS9 1140 aa14.42□□□□□ -0.1
CDH1-212ENST00000611625 LDHAL6AQ6ZMR3 332 aa14.42□□□□□ -0.1
CDH1-212ENST00000611625 MICU3Q86XE3 530 aa14.42□□□□□ -0.1
CDH1-212ENST00000611625 EIF3JO75822 258 aaKnown RBP14.42□□□□□ -0.1
CDH1-212ENST00000611625 HSP90AB3PQ58FF7 597 aa14.42□□□□□ -0.1
CDH1-212ENST00000611625 MRPS27Q92552 414 aaKnown RBP14.42□□□□□ -0.1
CDH1-212ENST00000611625 TRMT112Q9UI30 125 aaKnown RBP14.42□□□□□ -0.1
CDH1-212ENST00000611625 SSRP1Q08945 709 aaKnown RBP14.42□□□□□ -0.1
CDH1-212ENST00000611625 SNW1Q13573 536 aaKnown RBP14.42□□□□□ -0.1
CDH1-212ENST00000611625 IQGAP3Q86VI3 1631 aa14.41□□□□□ -0.1
CDH1-212ENST00000611625 BRD1O95696 1058 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms