RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 IGKV5-2P06315 115 aa16.9■□□□□ 0.3
COPS7B-223ENST00000611614 MX1P20591 662 aa16.9■□□□□ 0.3
COPS7B-223ENST00000611614 SLC4A9Q96Q91 983 aa16.9■□□□□ 0.3
COPS7B-223ENST00000611614 ZBTB3Q9H5J0 574 aa16.9■□□□□ 0.3
COPS7B-223ENST00000611614 GCKRQ14397 625 aa16.9■□□□□ 0.3
COPS7B-223ENST00000611614 SSH3Q8TE77 659 aa16.9■□□□□ 0.3
COPS7B-223ENST00000611614 GZF1Q9H116 711 aaPredicted RBP16.89■□□□□ 0.29
COPS7B-223ENST00000611614 GRPEL1Q9HAV7 217 aa16.89■□□□□ 0.29
COPS7B-223ENST00000611614 FOXD4L1Q9NU39 408 aa16.89■□□□□ 0.29
COPS7B-223ENST00000611614 STAP2Q9UGK3 403 aa16.89■□□□□ 0.29
COPS7B-223ENST00000611614 ZNF772Q68DY9 489 aaPredicted RBP16.89■□□□□ 0.29
COPS7B-223ENST00000611614 ATP5J2-PTCD1G3V325 749 aa16.88■□□□□ 0.29
COPS7B-223ENST00000611614 SRGAP3O43295 1099 aa16.88■□□□□ 0.29
COPS7B-223ENST00000611614 PPP1R42Q7Z4L9 355 aa16.88■□□□□ 0.29
COPS7B-223ENST00000611614 THSD7AQ9UPZ6 1657 aa16.88■□□□□ 0.29
COPS7B-223ENST00000611614 POLA2Q14181 598 aa16.88■□□□□ 0.29
COPS7B-223ENST00000611614 UTYO14607 1347 aa16.87■□□□□ 0.29
COPS7B-223ENST00000611614 RAB11FIP3O75154 756 aa16.87■□□□□ 0.29
COPS7B-223ENST00000611614 IL6STP40189 918 aaPredicted RBP16.87■□□□□ 0.29
COPS7B-223ENST00000611614 AOX1Q06278 1338 aa16.87■□□□□ 0.29
COPS7B-223ENST00000611614 TUBGCP6Q96RT7 1819 aa16.87■□□□□ 0.29
COPS7B-223ENST00000611614 TSHZ3Q63HK5 1081 aa16.87■□□□□ 0.29
COPS7B-223ENST00000611614 CCDC87Q9NVE4 849 aa16.87■□□□□ 0.29
COPS7B-223ENST00000611614 CWC25Q9NXE8 425 aaPredicted RBP16.87■□□□□ 0.29
COPS7B-223ENST00000611614 ZBTB1Q9Y2K1 713 aa16.87■□□□□ 0.29
COPS7B-223ENST00000611614 A0A087WZG4 1122 aa16.86■□□□□ 0.29
COPS7B-223ENST00000611614 FAM182BQ5T319 152 aa16.86■□□□□ 0.29
COPS7B-223ENST00000611614 PANK2Q9BZ23 570 aa16.86■□□□□ 0.29
COPS7B-223ENST00000611614 ST18O60284 1047 aa16.86■□□□□ 0.29
COPS7B-223ENST00000611614 CCDC191Q8NCU4 936 aa16.86■□□□□ 0.29
COPS7B-223ENST00000611614 ESYT1Q9BSJ8 1104 aa16.85■□□□□ 0.29
COPS7B-223ENST00000611614 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
COPS7B-223ENST00000611614 HSP90AB4PQ58FF6 505 aa16.85■□□□□ 0.29
COPS7B-223ENST00000611614 HSP90AB3PQ58FF7 597 aa16.85■□□□□ 0.29
COPS7B-223ENST00000611614 MAP3K15Q6ZN16 1313 aa16.84■□□□□ 0.29
COPS7B-223ENST00000611614 SURF6O75683 361 aaKnown RBP16.84■□□□□ 0.29
COPS7B-223ENST00000611614 MTX1Q13505 466 aa16.84■□□□□ 0.29
COPS7B-223ENST00000611614 UBE3BQ7Z3V4 1068 aa16.84■□□□□ 0.29
COPS7B-223ENST00000611614 CHMLP26374 656 aa16.84■□□□□ 0.29
COPS7B-223ENST00000611614 TCIRG1Q13488 830 aa16.84■□□□□ 0.29
COPS7B-223ENST00000611614 SUCLG2Q96I99 432 aa16.84■□□□□ 0.29
COPS7B-223ENST00000611614 TRIM6-TRIM34B2RNG4 842 aa16.83■□□□□ 0.28
COPS7B-223ENST00000611614 ITPK1Q13572 414 aa16.83■□□□□ 0.28
COPS7B-223ENST00000611614 DZIP3Q86Y13 1208 aaKnown RBP16.83■□□□□ 0.28
COPS7B-223ENST00000611614 RILPL2Q969X0 211 aa16.83■□□□□ 0.28
COPS7B-223ENST00000611614 BICC1Q9H694 974 aaKnown RBP16.83■□□□□ 0.28
COPS7B-223ENST00000611614 SSFA2P28290 1259 aa16.82■□□□□ 0.28
COPS7B-223ENST00000611614 RBM6P78332 1123 aaKnown RBP16.82■□□□□ 0.28
COPS7B-223ENST00000611614 OS9Q13438 667 aaPredicted RBP16.82■□□□□ 0.28
COPS7B-223ENST00000611614 CLEC17AQ6ZS10 378 aa16.82■□□□□ 0.28
COPS7B-223ENST00000611614 ARFGEF2Q9Y6D5 1785 aa16.82■□□□□ 0.28
COPS7B-223ENST00000611614 GIGYF2Q6Y7W6 1299 aaKnown RBP16.82■□□□□ 0.28
COPS7B-223ENST00000611614 KRT27Q7Z3Y8 459 aa16.82■□□□□ 0.28
COPS7B-223ENST00000611614 RHPN1Q8TCX5 695 aa16.82■□□□□ 0.28
COPS7B-223ENST00000611614 IL1RAPL2Q9NP60 686 aa16.82■□□□□ 0.28
COPS7B-223ENST00000611614 INTS5Q6P9B9 1019 aaKnown RBP16.81■□□□□ 0.28
COPS7B-223ENST00000611614 FAM196AQ6ZSG2 479 aa16.81■□□□□ 0.28
COPS7B-223ENST00000611614 ERVV-1B6SEH8 477 aa16.81■□□□□ 0.28
COPS7B-223ENST00000611614 MCCP23508 829 aa16.81■□□□□ 0.28
COPS7B-223ENST00000611614 KIF1BPQ96EK5 621 aa16.81■□□□□ 0.28
COPS7B-223ENST00000611614 CWC22Q9HCG8 908 aaKnown RBP16.81■□□□□ 0.28
COPS7B-223ENST00000611614 TBC1D2BQ9UPU7 963 aa16.81■□□□□ 0.28
COPS7B-223ENST00000611614 GOLGA6L22H0YM25 854 aa16.8■□□□□ 0.28
COPS7B-223ENST00000611614 EIF5P55010 431 aaKnown RBP16.8■□□□□ 0.28
COPS7B-223ENST00000611614 NUCB2P80303 420 aa16.8■□□□□ 0.28
COPS7B-223ENST00000611614 TRIM28Q13263 835 aaKnown RBP16.8■□□□□ 0.28
COPS7B-223ENST00000611614 NUTM1Q86Y26 1132 aa16.8■□□□□ 0.28
COPS7B-223ENST00000611614 ISCA1Q9BUE6 129 aa16.8■□□□□ 0.28
COPS7B-223ENST00000611614 TJP1Q07157 1748 aa16.8■□□□□ 0.28
COPS7B-223ENST00000611614 ESPNB1AK53 854 aa16.79■□□□□ 0.28
COPS7B-223ENST00000611614 H7C1W4 665 aa16.79■□□□□ 0.28
COPS7B-223ENST00000611614 PTF1AQ7RTS3 328 aa16.79■□□□□ 0.28
COPS7B-223ENST00000611614 JARID2Q92833 1246 aaPredicted RBP16.79■□□□□ 0.28
COPS7B-223ENST00000611614 NAP1L5Q96NT1 182 aaPredicted RBP16.79■□□□□ 0.28
COPS7B-223ENST00000611614 BCL11BQ9C0K0 894 aaPredicted RBP16.79■□□□□ 0.28
COPS7B-223ENST00000611614 ANAPC15P60006 121 aa16.79■□□□□ 0.28
COPS7B-223ENST00000611614 KAZALD1Q96I82 304 aa16.79■□□□□ 0.28
COPS7B-223ENST00000611614 CCNL1Q9UK58 526 aaPredicted RBP16.79■□□□□ 0.28
COPS7B-223ENST00000611614 ERC1Q8IUD2 1116 aa16.78■□□□□ 0.28
COPS7B-223ENST00000611614 TRIM44Q96DX7 344 aaPredicted RBP16.78■□□□□ 0.28
COPS7B-223ENST00000611614 ANO2Q9NQ90 1003 aa16.78■□□□□ 0.28
COPS7B-223ENST00000611614 COL15A1P39059 1388 aa16.78■□□□□ 0.28
COPS7B-223ENST00000611614 AFDNP55196 1824 aaKnown RBP16.78■□□□□ 0.28
COPS7B-223ENST00000611614 EPB41L2O43491 1005 aaKnown RBP16.77■□□□□ 0.28
COPS7B-223ENST00000611614 CYP2E1P05181 493 aaPredicted RBP16.77■□□□□ 0.28
COPS7B-223ENST00000611614 G3BP1Q13283 466 aaKnown RBP eCLIP16.77■□□□□ 0.28
COPS7B-223ENST00000611614 HLFQ16534 295 aa16.77■□□□□ 0.28
COPS7B-223ENST00000611614 PI4K2BQ8TCG2 481 aa16.77■□□□□ 0.28
COPS7B-223ENST00000611614 BAG4O95429 457 aaKnown RBP16.77■□□□□ 0.27
COPS7B-223ENST00000611614 GPTP24298 496 aa16.77■□□□□ 0.27
COPS7B-223ENST00000611614 LINC00116Q8NCU8 138 aa16.77■□□□□ 0.27
COPS7B-223ENST00000611614 IL17RAQ96F46 866 aa16.77■□□□□ 0.27
COPS7B-223ENST00000611614 CHMP3Q9Y3E7 222 aa16.77■□□□□ 0.27
COPS7B-223ENST00000611614 NHSQ6T4R5 1651 aa16.77■□□□□ 0.27
COPS7B-223ENST00000611614 NUP188Q5SRE5 1749 aa16.77■□□□□ 0.27
COPS7B-223ENST00000611614 MCM2P49736 904 aa16.76■□□□□ 0.27
COPS7B-223ENST00000611614 NEK4P51957 841 aa16.76■□□□□ 0.27
COPS7B-223ENST00000611614 FBXO41Q8TF61 875 aa16.76■□□□□ 0.27
COPS7B-223ENST00000611614 ZNF652Q9Y2D9 606 aa16.76■□□□□ 0.27
COPS7B-223ENST00000611614 RXRBP28702 533 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms