RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 AIMP1Q12904 312 aaKnown RBP22.6■■□□□ 1.21
PRKN-208ENST00000610470 XAGE3Q8WTP9 111 aa22.6■■□□□ 1.21
PRKN-208ENST00000610470 RPGRQ92834 1020 aaKnown RBP22.6■■□□□ 1.21
PRKN-208ENST00000610470 HDGFL1Q5TGJ6 251 aa22.59■■□□□ 1.21
PRKN-208ENST00000610470 UTP14AQ9BVJ6 771 aaKnown RBP22.59■■□□□ 1.21
PRKN-208ENST00000610470 HOXA10P31260 410 aaPredicted RBP22.58■■□□□ 1.21
PRKN-208ENST00000610470 SMC1BQ8NDV3 1235 aa22.58■■□□□ 1.21
PRKN-208ENST00000610470 RNF123Q5XPI4 1314 aa22.57■■□□□ 1.2
PRKN-208ENST00000610470 RBM17Q96I25 401 aaKnown RBP22.57■■□□□ 1.2
PRKN-208ENST00000610470 MBIPQ9NS73 344 aa22.57■■□□□ 1.2
PRKN-208ENST00000610470 CHPF2Q9P2E5 772 aa22.57■■□□□ 1.2
PRKN-208ENST00000610470 CC2D2BQ6DHV5 1058 aa22.56■■□□□ 1.2
PRKN-208ENST00000610470 OLFM4Q6UX06 510 aa22.56■■□□□ 1.2
PRKN-208ENST00000610470 NLRP3Q96P20 1036 aa22.56■■□□□ 1.2
PRKN-208ENST00000610470 IFT57Q9NWB7 429 aa22.56■■□□□ 1.2
PRKN-208ENST00000610470 DBF4Q9UBU7 674 aaPredicted RBP22.56■■□□□ 1.2
PRKN-208ENST00000610470 WDR90Q96KV7 1748 aa22.56■■□□□ 1.2
PRKN-208ENST00000610470 ZNF853P0CG23 659 aa22.55■■□□□ 1.2
PRKN-208ENST00000610470 GNAI1P63096 354 aa22.55■■□□□ 1.2
PRKN-208ENST00000610470 TCIRG1Q13488 830 aa22.55■■□□□ 1.2
PRKN-208ENST00000610470 DUSP27Q5VZP5 1158 aa22.55■■□□□ 1.2
PRKN-208ENST00000610470 CRAMP1Q96RY5 1269 aa22.55■■□□□ 1.2
PRKN-208ENST00000610470 ZNF277Q9NRM2 450 aaPredicted RBP22.55■■□□□ 1.2
PRKN-208ENST00000610470 SLC10A5Q5PT55 438 aa22.54■■□□□ 1.2
PRKN-208ENST00000610470 NLRP10Q86W26 655 aa22.54■■□□□ 1.2
PRKN-208ENST00000610470 POTECB2RU33 542 aa22.53■■□□□ 1.2
PRKN-208ENST00000610470 GRIPAP1Q4V328 841 aa22.53■■□□□ 1.2
PRKN-208ENST00000610470 SYNE4Q8N205 404 aa22.53■■□□□ 1.2
PRKN-208ENST00000610470 PSMD1Q99460 953 aa22.53■■□□□ 1.2
PRKN-208ENST00000610470 HYPKQ9NX55 129 aa22.53■■□□□ 1.2
PRKN-208ENST00000610470 ANKRD36CQ5JPF3 1778 aa22.53■■□□□ 1.2
PRKN-208ENST00000610470 DDNO94850 711 aaPredicted RBP22.52■■□□□ 1.2
PRKN-208ENST00000610470 IARSP41252 1262 aaKnown RBP22.52■■□□□ 1.2
PRKN-208ENST00000610470 PLBD2Q8NHP8 589 aa22.52■■□□□ 1.2
PRKN-208ENST00000610470 ZNF316A6NFI3 1004 aaPredicted RBP22.51■■□□□ 1.19
PRKN-208ENST00000610470 PPEF1O14829 653 aaPredicted RBP22.51■■□□□ 1.19
PRKN-208ENST00000610470 ANKRD13DQ6ZTN6 518 aa22.51■■□□□ 1.19
PRKN-208ENST00000610470 C3orf67Q6ZVT6 689 aa22.51■■□□□ 1.19
PRKN-208ENST00000610470 TRMT112Q9UI30 125 aaKnown RBP22.51■■□□□ 1.19
PRKN-208ENST00000610470 SNED1Q8TER0 1413 aa22.5■■□□□ 1.19
PRKN-208ENST00000610470 TMX4Q9H1E5 349 aaPredicted RBP22.5■■□□□ 1.19
PRKN-208ENST00000610470 SH3TC1Q8TE82 1336 aa22.5■■□□□ 1.19
PRKN-208ENST00000610470 IQCA1LA6NCM1 817 aa22.49■■□□□ 1.19
PRKN-208ENST00000610470 CCDC184Q52MB2 194 aa22.49■■□□□ 1.19
PRKN-208ENST00000610470 CHMP4AQ9BY43 222 aa22.48■■□□□ 1.19
PRKN-208ENST00000610470 ANP32CO43423 234 aa22.47■■□□□ 1.19
PRKN-208ENST00000610470 HCLS1P14317 486 aaPredicted RBP22.47■■□□□ 1.19
PRKN-208ENST00000610470 DNAJC5GQ8N7S2 189 aa22.47■■□□□ 1.19
PRKN-208ENST00000610470 JDP2Q8WYK2 163 aa22.47■■□□□ 1.19
PRKN-208ENST00000610470 L3MBTL3Q96JM7 780 aaPredicted RBP22.47■■□□□ 1.19
PRKN-208ENST00000610470 FZD9O00144 591 aa22.46■■□□□ 1.19
PRKN-208ENST00000610470 TCERG1O14776 1098 aaKnown RBP22.46■■□□□ 1.19
PRKN-208ENST00000610470 ISCA1Q9BUE6 129 aa22.46■■□□□ 1.19
PRKN-208ENST00000610470 ABCC4O15439 1325 aa22.46■■□□□ 1.19
PRKN-208ENST00000610470 ZNF541Q9H0D2 1346 aa22.46■■□□□ 1.19
PRKN-208ENST00000610470 ELL2O00472 640 aaPredicted RBP22.45■■□□□ 1.18
PRKN-208ENST00000610470 GOLGA2Q08379 1002 aa22.45■■□□□ 1.18
PRKN-208ENST00000610470 ATP6V0A2Q9Y487 856 aa22.45■■□□□ 1.18
PRKN-208ENST00000610470 BBOX1O75936 387 aa22.44■■□□□ 1.18
PRKN-208ENST00000610470 CCDC27Q2M243 656 aa22.44■■□□□ 1.18
PRKN-208ENST00000610470 DDX46Q7L014 1031 aaKnown RBP22.44■■□□□ 1.18
PRKN-208ENST00000610470 MRS2Q9HD23 443 aa22.44■■□□□ 1.18
PRKN-208ENST00000610470 ATP5J2-PTCD1G3V325 749 aa22.43■■□□□ 1.18
PRKN-208ENST00000610470 HTRA3P83110 453 aa22.43■■□□□ 1.18
PRKN-208ENST00000610470 CHADLQ6NUI6 762 aa22.43■■□□□ 1.18
PRKN-208ENST00000610470 RIC3Q7Z5B4 369 aa22.43■■□□□ 1.18
PRKN-208ENST00000610470 LARGE2Q8N3Y3 721 aa22.43■■□□□ 1.18
PRKN-208ENST00000610470 C8orf58Q8NAV2 365 aa22.43■■□□□ 1.18
PRKN-208ENST00000610470 EIF6P56537 245 aaKnown RBP22.42■■□□□ 1.18
PRKN-208ENST00000610470 TRIM28Q13263 835 aaKnown RBP22.42■■□□□ 1.18
PRKN-208ENST00000610470 CCDC30Q5VVM6 783 aa22.42■■□□□ 1.18
PRKN-208ENST00000610470 GPC2Q8N158 579 aa22.42■■□□□ 1.18
PRKN-208ENST00000610470 TAF1DQ9H5J8 278 aaPredicted RBP22.42■■□□□ 1.18
PRKN-208ENST00000610470 SCN4AP35499 1836 aa22.42■■□□□ 1.18
PRKN-208ENST00000610470 GRAPQ13588 217 aa22.41■■□□□ 1.18
PRKN-208ENST00000610470 NCBP3Q53F19 620 aaKnown RBP22.41■■□□□ 1.18
PRKN-208ENST00000610470 SP8Q8IXZ3 490 aa22.41■■□□□ 1.18
PRKN-208ENST00000610470 SUPT20HQ8NEM7 779 aa22.41■■□□□ 1.18
PRKN-208ENST00000610470 GRAPLQ8TC17 118 aaPredicted RBP22.41■■□□□ 1.18
PRKN-208ENST00000610470 KLRG1Q96E93 195 aa22.41■■□□□ 1.18
PRKN-208ENST00000610470 VPS33BQ9H267 617 aa22.41■■□□□ 1.18
PRKN-208ENST00000610470 PHAXQ9H814 394 aaKnown RBP22.41■■□□□ 1.18
PRKN-208ENST00000610470 HACL1Q9UJ83 578 aa22.41■■□□□ 1.18
PRKN-208ENST00000610470 LAMB2P55268 1798 aa22.4■■□□□ 1.18
PRKN-208ENST00000610470 LDHDQ86WU2 507 aa22.4■■□□□ 1.18
PRKN-208ENST00000610470 WWC1Q8IX03 1113 aa22.4■■□□□ 1.18
PRKN-208ENST00000610470 ZNF428Q96B54 188 aa22.4■■□□□ 1.18
PRKN-208ENST00000610470 FAM89AQ96GI7 184 aa22.4■■□□□ 1.18
PRKN-208ENST00000610470 PPIP5K2O43314 1243 aa22.39■■□□□ 1.17
PRKN-208ENST00000610470 TMC4Q7Z404 712 aa22.39■■□□□ 1.17
PRKN-208ENST00000610470 SLC51AQ86UW1 340 aa22.39■■□□□ 1.17
PRKN-208ENST00000610470 NIM1KQ8IY84 436 aa22.39■■□□□ 1.17
PRKN-208ENST00000610470 DDX58O95786 925 aaKnown RBP22.38■■□□□ 1.17
PRKN-208ENST00000610470 POTEIP0CG38 1075 aa22.38■■□□□ 1.17
PRKN-208ENST00000610470 POTEJP0CG39 1038 aa22.38■■□□□ 1.17
PRKN-208ENST00000610470 DPP8Q6V1X1 898 aaPredicted RBP22.38■■□□□ 1.17
PRKN-208ENST00000610470 RTFDC1Q9BY42 306 aaPredicted RBP22.38■■□□□ 1.17
PRKN-208ENST00000610470 IL16Q14005 1332 aa22.37■■□□□ 1.17
PRKN-208ENST00000610470 COL4A5P29400 1685 aa22.37■■□□□ 1.17
PRKN-208ENST00000610470 HSP90B1P14625 803 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms