RNA–Protein interactions for RNA: ENST00000609318.5

LARP4B-210, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 1 (best)

Gene LARP4B, Length 4,848 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-210ENST00000609318 SYCP1Q15431 976 aa12.12□□□□□ -0.47
LARP4B-210ENST00000609318 ESYT1Q9BSJ8 1104 aa12.12□□□□□ -0.47
LARP4B-210ENST00000609318 PA2G4Q9UQ80 394 aaKnown RBP12.12□□□□□ -0.47
LARP4B-210ENST00000609318 MTERF4Q7Z6M4 381 aaKnown RBP12.12□□□□□ -0.47
LARP4B-210ENST00000609318 ARHGEF25Q86VW2 580 aa12.12□□□□□ -0.47
LARP4B-210ENST00000609318 CLTCQ00610 1675 aaKnown RBP12.12□□□□□ -0.47
LARP4B-210ENST00000609318 ZNF853P0CG23 659 aa12.12□□□□□ -0.47
LARP4B-210ENST00000609318 BRPF1P55201 1214 aaPredicted RBP12.12□□□□□ -0.47
LARP4B-210ENST00000609318 DYDC1Q8WWB3 177 aa12.12□□□□□ -0.47
LARP4B-210ENST00000609318 KIAA1210Q9ULL0 1709 aa12.12□□□□□ -0.47
LARP4B-210ENST00000609318 ANKARQ7Z5J8 1434 aa12.12□□□□□ -0.47
LARP4B-210ENST00000609318 NASPP49321 788 aaPredicted RBP12.12□□□□□ -0.47
LARP4B-210ENST00000609318 IMMTQ16891 758 aaKnown RBP12.12□□□□□ -0.47
LARP4B-210ENST00000609318 LRP2BPQ9P2M1 347 aa12.12□□□□□ -0.47
LARP4B-210ENST00000609318 RTL1A6NKG5 1358 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 DCAF8L1A6NGE4 600 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 ZPR1O75312 459 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 DDB1Q16531 1140 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 SKIDA1Q1XH10 827 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 OLFM4Q6UX06 510 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 PDCL3Q9H2J4 239 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 BTG4Q9NY30 223 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 ZC3H13Q5T200 1668 aaKnown RBP12.11□□□□□ -0.47
LARP4B-210ENST00000609318 SLC3A2P08195 630 aaKnown RBP12.11□□□□□ -0.47
LARP4B-210ENST00000609318 LIMCH1Q9UPQ0 1083 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 NRXN1Q9ULB1 1477 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 XBP1P17861 261 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 KRT85P78386 507 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 SH2B1Q9NRF2 756 aaPredicted RBP12.11□□□□□ -0.47
LARP4B-210ENST00000609318 POLR1AO95602 1720 aaPredicted RBP12.11□□□□□ -0.47
LARP4B-210ENST00000609318 VWDEQ8N2E2 1590 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 LETM1O95202 739 aaPredicted RBP12.11□□□□□ -0.47
LARP4B-210ENST00000609318 CCAR1Q8IX12 1150 aaKnown RBP12.11□□□□□ -0.47
LARP4B-210ENST00000609318 AIDAQ96BJ3 306 aa12.11□□□□□ -0.47
LARP4B-210ENST00000609318 TTC41PQ6P2S7 1318 aa12.1□□□□□ -0.47
LARP4B-210ENST00000609318 GOLIM4O00461 696 aa12.1□□□□□ -0.47
LARP4B-210ENST00000609318 LEKR1Q6ZMV7 388 aa12.1□□□□□ -0.47
LARP4B-210ENST00000609318 CCDC83Q8IWF9 413 aa12.1□□□□□ -0.47
LARP4B-210ENST00000609318 PDILTQ8N807 584 aa12.1□□□□□ -0.47
LARP4B-210ENST00000609318 NAT10Q9H0A0 1025 aaKnown RBP12.1□□□□□ -0.47
LARP4B-210ENST00000609318 BRMS1Q9HCU9 246 aa12.1□□□□□ -0.47
LARP4B-210ENST00000609318 MED14O60244 1454 aa12.1□□□□□ -0.47
LARP4B-210ENST00000609318 PTPRMP28827 1452 aa12.1□□□□□ -0.47
LARP4B-210ENST00000609318 PHF23Q9BUL5 403 aaPredicted RBP12.1□□□□□ -0.47
LARP4B-210ENST00000609318 IL27Q8NEV9 243 aa12.1□□□□□ -0.47
LARP4B-210ENST00000609318 ZNF396Q96N95 335 aaPredicted RBP12.1□□□□□ -0.47
LARP4B-210ENST00000609318 RAI14Q9P0K7 980 aa12.1□□□□□ -0.47
LARP4B-210ENST00000609318 KIAA0754O94854 1291 aa12.09□□□□□ -0.47
LARP4B-210ENST00000609318 SNX21Q969T3 373 aa12.09□□□□□ -0.47
LARP4B-210ENST00000609318 ARHGEF40Q8TER5 1519 aa12.09□□□□□ -0.47
LARP4B-210ENST00000609318 UBAP1LF5GYI3 381 aa12.09□□□□□ -0.47
LARP4B-210ENST00000609318 SLC5A1P13866 664 aa12.09□□□□□ -0.47
LARP4B-210ENST00000609318 IL15P40933 162 aaPredicted RBP12.09□□□□□ -0.47
LARP4B-210ENST00000609318 TDO2P48775 406 aa12.09□□□□□ -0.47
LARP4B-210ENST00000609318 RNF214Q8ND24 703 aa12.09□□□□□ -0.47
LARP4B-210ENST00000609318 ABCF2Q9UG63 623 aa12.09□□□□□ -0.47
LARP4B-210ENST00000609318 PIK3C2BO00750 1634 aa12.09□□□□□ -0.47
LARP4B-210ENST00000609318 HMGB2P26583 209 aaKnown RBP12.09□□□□□ -0.47
LARP4B-210ENST00000609318 ANAPC15P60006 121 aa12.09□□□□□ -0.47
LARP4B-210ENST00000609318 TNPO1Q92973 898 aaKnown RBP12.09□□□□□ -0.47
LARP4B-210ENST00000609318 GOLGA6L10A6NI86 522 aa12.09□□□□□ -0.47
LARP4B-210ENST00000609318 TTLL5Q6EMB2 1281 aa12.09□□□□□ -0.47
LARP4B-210ENST00000609318 ZNF496Q96IT1 587 aaPredicted RBP12.09□□□□□ -0.47
LARP4B-210ENST00000609318 IKQ13123 557 aaPredicted RBP12.08□□□□□ -0.47
LARP4B-210ENST00000609318 OTUD7AQ8TE49 926 aaPredicted RBP12.08□□□□□ -0.47
LARP4B-210ENST00000609318 METTL22Q9BUU2 404 aaPredicted RBP12.08□□□□□ -0.47
LARP4B-210ENST00000609318 DEPDC5O75140 1603 aa12.08□□□□□ -0.48
LARP4B-210ENST00000609318 IQGAP1P46940 1657 aa12.08□□□□□ -0.48
LARP4B-210ENST00000609318 PNPLA6Q8IY17 1366 aa12.08□□□□□ -0.48
LARP4B-210ENST00000609318 GIGYF1O75420 1035 aaPredicted RBP12.08□□□□□ -0.48
LARP4B-210ENST00000609318 HMGB1P09429 215 aaKnown RBP12.08□□□□□ -0.48
LARP4B-210ENST00000609318 SSFA2P28290 1259 aa12.08□□□□□ -0.48
LARP4B-210ENST00000609318 BICC1Q9H694 974 aaKnown RBP12.08□□□□□ -0.48
LARP4B-210ENST00000609318 KCNQ3O43525 872 aa12.08□□□□□ -0.48
LARP4B-210ENST00000609318 FILIP1LQ4L180 1135 aa12.08□□□□□ -0.48
LARP4B-210ENST00000609318 ACSBG1Q96GR2 724 aa12.08□□□□□ -0.48
LARP4B-210ENST00000609318 LUC7LQ9NQ29 371 aaKnown RBP12.08□□□□□ -0.48
LARP4B-210ENST00000609318 DIP2BQ9P265 1576 aa12.08□□□□□ -0.48
LARP4B-210ENST00000609318 LMTK3Q96Q04 1460 aa12.08□□□□□ -0.48
LARP4B-210ENST00000609318 PNMA6EA0A0J9YXQ4 647 aa12.08□□□□□ -0.48
LARP4B-210ENST00000609318 MAP3K12Q12852 859 aa12.08□□□□□ -0.48
LARP4B-210ENST00000609318 ENOX2Q16206 610 aaKnown RBP12.08□□□□□ -0.48
LARP4B-210ENST00000609318 TAF3Q5VWG9 929 aa12.08□□□□□ -0.48
LARP4B-210ENST00000609318 SNRKQ9NRH2 765 aa12.08□□□□□ -0.48
LARP4B-210ENST00000609318 NBPF7P0C2Y1 421 aaPredicted RBP12.07□□□□□ -0.48
LARP4B-210ENST00000609318 CAVIN4Q5BKX8 364 aa12.07□□□□□ -0.48
LARP4B-210ENST00000609318 PLBD2Q8NHP8 589 aa12.07□□□□□ -0.48
LARP4B-210ENST00000609318 SMARCC1Q92922 1105 aaPredicted RBP12.07□□□□□ -0.48
LARP4B-210ENST00000609318 DLC1Q96QB1 1528 aa12.07□□□□□ -0.48
LARP4B-210ENST00000609318 KDM4AO75164 1064 aa12.07□□□□□ -0.48
LARP4B-210ENST00000609318 PHKG2P15735 406 aa12.07□□□□□ -0.48
LARP4B-210ENST00000609318 SMARCE1Q969G3 411 aa12.07□□□□□ -0.48
LARP4B-210ENST00000609318 ATP6V1AP38606 617 aa12.07□□□□□ -0.48
LARP4B-210ENST00000609318 DDX46Q7L014 1031 aaKnown RBP12.07□□□□□ -0.48
LARP4B-210ENST00000609318 CCDC69A6NI79 296 aa12.07□□□□□ -0.48
LARP4B-210ENST00000609318 KINO60870 393 aaKnown RBP12.07□□□□□ -0.48
LARP4B-210ENST00000609318 USP8P40818 1118 aa12.07□□□□□ -0.48
LARP4B-210ENST00000609318 CEBPZQ03701 1054 aaKnown RBP12.07□□□□□ -0.48
LARP4B-210ENST00000609318 STK38Q15208 465 aa12.07□□□□□ -0.48
LARP4B-210ENST00000609318 TRIM22Q8IYM9 498 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms