RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 PICK1Q9NRD5 415 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 GNL3LQ9NVN8 582 aaKnown RBP5.52□□□□□ -1.53
HDDC2-208ENST00000609021 V9GYY5 206 aaPredicted RBP5.52□□□□□ -1.53
HDDC2-208ENST00000609021 MYO5BQ9ULV0 1848 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 CCDC184Q52MB2 194 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 RRP12Q5JTH9 1297 aaKnown RBP5.52□□□□□ -1.53
HDDC2-208ENST00000609021 AKNAD1Q5T1N1 836 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 SYNE3Q6ZMZ3 975 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 TATDN2Q93075 761 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 BHMTQ93088 406 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 POLR3CQ9BUI4 534 aaPredicted RBP5.52□□□□□ -1.53
HDDC2-208ENST00000609021 TRIM7Q9C029 511 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 PDZRN3Q9UPQ7 1066 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 CARMIL2Q6F5E8 1435 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 POLR3GO15318 223 aaPredicted RBP5.52□□□□□ -1.53
HDDC2-208ENST00000609021 ELF1P32519 619 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 IRF5Q13568 498 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 ACBD5Q5T8D3 534 aaPredicted RBP5.52□□□□□ -1.53
HDDC2-208ENST00000609021 PACS2Q86VP3 889 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 LCA5Q86VQ0 697 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 ZNF397Q8NF99 534 aaPredicted RBP5.52□□□□□ -1.53
HDDC2-208ENST00000609021 GOLGA5Q8TBA6 731 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 MPP4Q96JB8 637 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 NACA2Q9H009 215 aa5.52□□□□□ -1.53
HDDC2-208ENST00000609021 RNF123Q5XPI4 1314 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 EXOC5O00471 708 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 CBFA2T2O43439 604 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 DRAXINQ8NBI3 349 aaPredicted RBP5.51□□□□□ -1.53
HDDC2-208ENST00000609021 N4BP2L2Q92802 583 aaPredicted RBP5.51□□□□□ -1.53
HDDC2-208ENST00000609021 RBM33Q96EV2 1170 aaKnown RBP5.51□□□□□ -1.53
HDDC2-208ENST00000609021 COMMD10Q9Y6G5 202 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 LAMC1P11047 1609 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 TET3O43151 1660 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 DYTNA2CJ06 578 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 KIF2AO00139 706 aaPredicted RBP5.51□□□□□ -1.53
HDDC2-208ENST00000609021 PPFIA3O75145 1194 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 SF3B2Q13435 895 aaKnown RBP5.51□□□□□ -1.53
HDDC2-208ENST00000609021 ENOX2Q16206 610 aaKnown RBP5.51□□□□□ -1.53
HDDC2-208ENST00000609021 CC2D1AQ6P1N0 951 aaPredicted RBP5.51□□□□□ -1.53
HDDC2-208ENST00000609021 NCAPG2Q86XI2 1143 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 CCDC112Q8NEF3 446 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 RSRC1Q96IZ7 334 aaKnown RBP5.51□□□□□ -1.53
HDDC2-208ENST00000609021 FAM81BQ96LP2 452 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 IRF2BPLQ9H1B7 796 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 PLCH2O75038 1416 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 HECW2Q9P2P5 1572 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 CEP104O60308 925 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 GCFC2P16383 781 aaKnown RBP5.51□□□□□ -1.53
HDDC2-208ENST00000609021 TRIM21P19474 475 aaKnown RBP5.51□□□□□ -1.53
HDDC2-208ENST00000609021 CCDC30Q5VVM6 783 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 TMEM110Q86TL2 294 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 VPS37AQ8NEZ2 397 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 PIBF1Q8WXW3 757 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 RSPH1Q8WYR4 309 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 SAAL1Q96ER3 474 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 YIPF2Q9BWQ6 316 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 LRRC27Q9C0I9 530 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 RSPH9Q9H1X1 276 aaPredicted RBP5.51□□□□□ -1.53
HDDC2-208ENST00000609021 EXOC1Q9NV70 894 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.51□□□□□ -1.53
HDDC2-208ENST00000609021 AKAP2Q9Y2D5 859 aa5.51□□□□□ -1.53
HDDC2-208ENST00000609021 KIAA1107Q9UPP5 1409 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 TRPM1Q7Z4N2 1603 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 TEX14Q8IWB6 1497 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 FMNL1O95466 1100 aaPredicted RBP5.5□□□□□ -1.53
HDDC2-208ENST00000609021 ATICP31939 592 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 CRYMQ14894 314 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 SYCP1Q15431 976 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 SOGA3Q5TF21 947 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 SDCCAG8Q86SQ7 713 aaPredicted RBP5.5□□□□□ -1.53
HDDC2-208ENST00000609021 KIAA0825Q8IV33 1275 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 CACTIN-AS1Q8N1I8 211 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 CCDC114Q96M63 670 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 AGBL1Q96MI9 1066 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 TRIM4Q9C037 500 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 KLHL42Q9P2K6 505 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 LMTK2Q8IWU2 1503 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 E2F6O75461 281 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 ERLIN1O75477 346 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 PECAM1P16284 738 aaPredicted RBP5.5□□□□□ -1.53
HDDC2-208ENST00000609021 CLNS1AP54105 237 aaKnown RBP5.5□□□□□ -1.53
HDDC2-208ENST00000609021 TMED1Q13445 227 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 LRRC23Q53EV4 343 aaPredicted RBP5.5□□□□□ -1.53
HDDC2-208ENST00000609021 CCDC92Q53HC0 331 aaPredicted RBP5.5□□□□□ -1.53
HDDC2-208ENST00000609021 ERC1Q8IUD2 1116 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 RBM12BQ8IXT5 1001 aaKnown RBP5.5□□□□□ -1.53
HDDC2-208ENST00000609021 AMOTL1Q8IY63 956 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 ELOA2Q8IYF1 753 aaPredicted RBP5.5□□□□□ -1.53
HDDC2-208ENST00000609021 SAMD3Q8N6K7 520 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 FBXO18Q8NFZ0 1043 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 WHAMMQ8TF30 809 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 SWAP70Q9UH65 585 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 DIS3Q9Y2L1 958 aaKnown RBP5.5□□□□□ -1.53
HDDC2-208ENST00000609021 PPLO60437 1756 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 NCOA1Q15788 1441 aa5.5□□□□□ -1.53
HDDC2-208ENST00000609021 TSPY4P0CV99 314 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 TSPY10P0CW01 314 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 SAPCD2Q86UD0 394 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 VTI1AQ96AJ9 217 aa5.49□□□□□ -1.53
HDDC2-208ENST00000609021 SCLT1Q96NL6 688 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms