RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 HUNKP57058 714 aa12.69□□□□□ -0.38
CTCFL-220ENST00000608858 KIF23Q02241 960 aaPredicted RBP12.69□□□□□ -0.38
CTCFL-220ENST00000608858 HABP4Q5JVS0 413 aaKnown RBP12.69□□□□□ -0.38
CTCFL-220ENST00000608858 USP48Q86UV5 1035 aa12.69□□□□□ -0.38
CTCFL-220ENST00000608858 RNF186Q9NXI6 227 aa12.69□□□□□ -0.38
CTCFL-220ENST00000608858 THSD7BQ9C0I4 1608 aa12.69□□□□□ -0.38
CTCFL-220ENST00000608858 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
CTCFL-220ENST00000608858 GTF2E1P29083 439 aaPredicted RBP12.68□□□□□ -0.38
CTCFL-220ENST00000608858 IL6STP40189 918 aaPredicted RBP12.68□□□□□ -0.38
CTCFL-220ENST00000608858 MTHFSDQ2M296 383 aaKnown RBP12.68□□□□□ -0.38
CTCFL-220ENST00000608858 TPTE2Q6XPS3 522 aa12.68□□□□□ -0.38
CTCFL-220ENST00000608858 NBPF15Q8N660 670 aa12.68□□□□□ -0.38
CTCFL-220ENST00000608858 ADARB2Q9NS39 739 aaKnown RBP12.68□□□□□ -0.38
CTCFL-220ENST00000608858 COL4A5P29400 1685 aa12.67□□□□□ -0.38
CTCFL-220ENST00000608858 IL13P35225 146 aa12.67□□□□□ -0.38
CTCFL-220ENST00000608858 HIRAP54198 1017 aaPredicted RBP12.67□□□□□ -0.38
CTCFL-220ENST00000608858 NOGQ13253 232 aa12.67□□□□□ -0.38
CTCFL-220ENST00000608858 GPRC5DQ9NZD1 345 aa12.67□□□□□ -0.38
CTCFL-220ENST00000608858 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
CTCFL-220ENST00000608858 NIP7Q9Y221 180 aaKnown RBP eCLIP12.67□□□□□ -0.38
CTCFL-220ENST00000608858 USP16Q9Y5T5 823 aa12.67□□□□□ -0.38
CTCFL-220ENST00000608858 KLRG2A4D1S0 409 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-220ENST00000608858 KCNQ3O43525 872 aa12.66□□□□□ -0.38
CTCFL-220ENST00000608858 HHIPL1Q96JK4 782 aa12.66□□□□□ -0.38
CTCFL-220ENST00000608858 PSMD1Q99460 953 aa12.66□□□□□ -0.38
CTCFL-220ENST00000608858 TEX13AQ9BXU3 409 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-220ENST00000608858 SHTN1A0MZ66 631 aa12.65□□□□□ -0.38
CTCFL-220ENST00000608858 PRAMEF22A3QJZ6 481 aa12.65□□□□□ -0.38
CTCFL-220ENST00000608858 GMPSP49915 693 aaPredicted RBP12.65□□□□□ -0.38
CTCFL-220ENST00000608858 ZNF790Q6PG37 636 aa12.65□□□□□ -0.38
CTCFL-220ENST00000608858 CTU1Q7Z7A3 348 aaKnown RBP12.65□□□□□ -0.38
CTCFL-220ENST00000608858 MORC1Q86VD1 984 aa12.65□□□□□ -0.38
CTCFL-220ENST00000608858 NUTM1Q86Y26 1132 aa12.65□□□□□ -0.38
CTCFL-220ENST00000608858 NIM1KQ8IY84 436 aa12.65□□□□□ -0.38
CTCFL-220ENST00000608858 FAM155AB1AL88 458 aaPredicted RBP12.64□□□□□ -0.39
CTCFL-220ENST00000608858 ZNF157P51786 506 aaPredicted RBP12.64□□□□□ -0.39
CTCFL-220ENST00000608858 CXCL9Q07325 125 aa12.64□□□□□ -0.39
CTCFL-220ENST00000608858 AOC3Q16853 763 aa12.64□□□□□ -0.39
CTCFL-220ENST00000608858 RGMBQ6NW40 437 aa12.64□□□□□ -0.39
CTCFL-220ENST00000608858 CDC37L1Q7L3B6 337 aa12.64□□□□□ -0.39
CTCFL-220ENST00000608858 CSRNP1Q96S65 589 aa12.64□□□□□ -0.39
CTCFL-220ENST00000608858 BCL2L13Q9BXK5 485 aa12.64□□□□□ -0.39
CTCFL-220ENST00000608858 PPIP5K2O43314 1243 aa12.63□□□□□ -0.39
CTCFL-220ENST00000608858 HLFQ16534 295 aa12.63□□□□□ -0.39
CTCFL-220ENST00000608858 IL17REQ8NFR9 667 aa12.63□□□□□ -0.39
CTCFL-220ENST00000608858 TRPM4Q8TD43 1214 aa12.63□□□□□ -0.39
CTCFL-220ENST00000608858 GCC1Q96CN9 775 aa12.63□□□□□ -0.39
CTCFL-220ENST00000608858 HEG1Q9ULI3 1381 aa12.63□□□□□ -0.39
CTCFL-220ENST00000608858 ARFGEF2Q9Y6D5 1785 aa12.63□□□□□ -0.39
CTCFL-220ENST00000608858 RAD17O75943 681 aa12.62□□□□□ -0.39
CTCFL-220ENST00000608858 TEFQ10587 303 aa12.62□□□□□ -0.39
CTCFL-220ENST00000608858 NGEFQ8N5V2 710 aa12.62□□□□□ -0.39
CTCFL-220ENST00000608858 PANK3Q9H999 370 aa12.62□□□□□ -0.39
CTCFL-220ENST00000608858 PGAP2Q9UHJ9 254 aa12.62□□□□□ -0.39
CTCFL-220ENST00000608858 HDAC9Q9UKV0 1011 aa12.62□□□□□ -0.39
CTCFL-220ENST00000608858 TBC1D8O95759 1140 aa12.61□□□□□ -0.39
CTCFL-220ENST00000608858 RBM26Q5T8P6 1007 aaKnown RBP12.61□□□□□ -0.39
CTCFL-220ENST00000608858 CLEC4GQ6UXB4 293 aa12.61□□□□□ -0.39
CTCFL-220ENST00000608858 RPGRQ92834 1020 aaKnown RBP12.61□□□□□ -0.39
CTCFL-220ENST00000608858 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
CTCFL-220ENST00000608858 CNOT7Q9UIV1 285 aaKnown RBP12.61□□□□□ -0.39
CTCFL-220ENST00000608858 ZBTB12Q9Y330 459 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-220ENST00000608858 NPC1L1Q9UHC9 1359 aa12.6□□□□□ -0.39
CTCFL-220ENST00000608858 C2orf69Q8N8R5 385 aa12.6□□□□□ -0.39
CTCFL-220ENST00000608858 CCDC102AQ96A19 550 aa12.6□□□□□ -0.39
CTCFL-220ENST00000608858 SAGE1Q9NXZ1 904 aa12.6□□□□□ -0.39
CTCFL-220ENST00000608858 ZNRF3Q9ULT6 936 aa12.6□□□□□ -0.39
CTCFL-220ENST00000608858 ZNF652Q9Y2D9 606 aa12.6□□□□□ -0.39
CTCFL-220ENST00000608858 FXR1P51114 621 aaKnown RBP eCLIP12.59□□□□□ -0.392e-8■□□□□ 9.7
CTCFL-220ENST00000608858 CC2D2BQ6DHV5 1058 aa12.59□□□□□ -0.39
CTCFL-220ENST00000608858 SAMD7Q7Z3H4 446 aa12.59□□□□□ -0.39
CTCFL-220ENST00000608858 GBA2Q9HCG7 927 aaPredicted RBP12.59□□□□□ -0.39
CTCFL-220ENST00000608858 SCN7AQ01118 1682 aa12.58□□□□□ -0.4
CTCFL-220ENST00000608858 BTBD11A6QL63 1104 aa12.58□□□□□ -0.4
CTCFL-220ENST00000608858 ADM5C9JUS6 153 aa12.58□□□□□ -0.4
CTCFL-220ENST00000608858 DLL1O00548 723 aa12.58□□□□□ -0.4
CTCFL-220ENST00000608858 PPEF1O14829 653 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-220ENST00000608858 TBC1D10BQ4KMP7 808 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-220ENST00000608858 MRC1P22897 1456 aa12.58□□□□□ -0.4
CTCFL-220ENST00000608858 NBPF26B4DH59 902 aa12.57□□□□□ -0.4
CTCFL-220ENST00000608858 H7C1D1 291 aa12.57□□□□□ -0.4
CTCFL-220ENST00000608858 NBPF10Q6P3W6 841 aaKnown RBP12.57□□□□□ -0.4
CTCFL-220ENST00000608858 C3orf67Q6ZVT6 689 aa12.57□□□□□ -0.4
CTCFL-220ENST00000608858 KRT26Q7Z3Y9 468 aa12.57□□□□□ -0.4
CTCFL-220ENST00000608858 ZC3H15Q8WU90 426 aaKnown RBP12.57□□□□□ -0.4
CTCFL-220ENST00000608858 ZNF296Q8WUU4 475 aaPredicted RBP12.57□□□□□ -0.4
CTCFL-220ENST00000608858 RBM17Q96I25 401 aaKnown RBP12.57□□□□□ -0.4
CTCFL-220ENST00000608858 POLR2AP24928 1970 aaKnown RBP12.57□□□□□ -0.4
CTCFL-220ENST00000608858 SNED1Q8TER0 1413 aa12.56□□□□□ -0.4
CTCFL-220ENST00000608858 EGFRP00533 1210 aa12.56□□□□□ -0.4
CTCFL-220ENST00000608858 GPTP24298 496 aa12.56□□□□□ -0.4
CTCFL-220ENST00000608858 CRY2Q49AN0 593 aa12.56□□□□□ -0.4
CTCFL-220ENST00000608858 MICALL2Q8IY33 904 aa12.56□□□□□ -0.4
CTCFL-220ENST00000608858 AKAP11Q9UKA4 1901 aa12.56□□□□□ -0.4
CTCFL-220ENST00000608858 GNAT3A8MTJ3 354 aa12.55□□□□□ -0.4
CTCFL-220ENST00000608858 HOXA10P31260 410 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-220ENST00000608858 TMX4Q9H1E5 349 aaPredicted RBP12.55□□□□□ -0.4
CTCFL-220ENST00000608858 UBR2Q8IWV8 1755 aa12.55□□□□□ -0.4
CTCFL-220ENST00000608858 ABCC12Q96J65 1359 aa12.55□□□□□ -0.4
CTCFL-220ENST00000608858 POTEFA5A3E0 1075 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms