RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ZBTB38Q8NAP3 1195 aaPredicted RBP26.62■■□□□ 1.85
USP6NL-204ENST00000606752 IL1RAPL2Q9NP60 686 aa26.62■■□□□ 1.85
USP6NL-204ENST00000606752 BTAF1O14981 1849 aa26.62■■□□□ 1.85
USP6NL-204ENST00000606752 LMBR1LQ6UX01 489 aa26.61■■□□□ 1.85
USP6NL-204ENST00000606752 CNTNAP4Q9C0A0 1308 aa26.61■■□□□ 1.85
USP6NL-204ENST00000606752 GSPT1P15170 499 aaKnown RBP26.6■■□□□ 1.85
USP6NL-204ENST00000606752 G3BP1Q13283 466 aaKnown RBP eCLIP26.6■■□□□ 1.85
USP6NL-204ENST00000606752 MYH14Q7Z406 1995 aaKnown RBP26.6■■□□□ 1.85
USP6NL-204ENST00000606752 SEC24BO95487 1268 aa26.6■■□□□ 1.85
USP6NL-204ENST00000606752 KCNQ4P56696 695 aa26.6■■□□□ 1.85
USP6NL-204ENST00000606752 RC3H1Q5TC82 1133 aaKnown RBP26.6■■□□□ 1.85
USP6NL-204ENST00000606752 COPRSQ9NQ92 184 aa26.6■■□□□ 1.85
USP6NL-204ENST00000606752 MX1P20591 662 aa26.59■■□□□ 1.85
USP6NL-204ENST00000606752 GPTP24298 496 aa26.59■■□□□ 1.85
USP6NL-204ENST00000606752 RFX5P48382 616 aaPredicted RBP26.59■■□□□ 1.85
USP6NL-204ENST00000606752 ZNF34Q8IZ26 560 aa26.59■■□□□ 1.85
USP6NL-204ENST00000606752 STAP2Q9UGK3 403 aa26.59■■□□□ 1.85
USP6NL-204ENST00000606752 CCNL1Q9UK58 526 aaPredicted RBP26.59■■□□□ 1.85
USP6NL-204ENST00000606752 COL5A3P25940 1745 aaPredicted RBP26.58■■□□□ 1.85
USP6NL-204ENST00000606752 CAMTA2O94983 1202 aa26.58■■□□□ 1.85
USP6NL-204ENST00000606752 ANP32AP39687 249 aaKnown RBP26.58■■□□□ 1.84
USP6NL-204ENST00000606752 SBF2Q86WG5 1849 aa26.57■■□□□ 1.84
USP6NL-204ENST00000606752 PTPN12Q05209 780 aaKnown RBP26.57■■□□□ 1.84
USP6NL-204ENST00000606752 FAM89AQ96GI7 184 aa26.57■■□□□ 1.84
USP6NL-204ENST00000606752 PLA2G12BQ9BX93 195 aa26.57■■□□□ 1.84
USP6NL-204ENST00000606752 CLASRPQ8N2M8 674 aaKnown RBP26.56■■□□□ 1.84
USP6NL-204ENST00000606752 KLHDC4Q8TBB5 520 aa26.55■■□□□ 1.84
USP6NL-204ENST00000606752 CDHR2Q9BYE9 1310 aa26.55■■□□□ 1.84
USP6NL-204ENST00000606752 SASH1O94885 1247 aa26.55■■□□□ 1.84
USP6NL-204ENST00000606752 SIL1Q9H173 461 aa26.55■■□□□ 1.84
USP6NL-204ENST00000606752 AOX1Q06278 1338 aa26.54■■□□□ 1.84
USP6NL-204ENST00000606752 NUTM1Q86Y26 1132 aa26.54■■□□□ 1.84
USP6NL-204ENST00000606752 CHMP3Q9Y3E7 222 aa26.54■■□□□ 1.84
USP6NL-204ENST00000606752 UPF2Q9HAU5 1272 aaKnown RBP26.53■■□□□ 1.84
USP6NL-204ENST00000606752 TRMT112Q9UI30 125 aaKnown RBP26.53■■□□□ 1.84
USP6NL-204ENST00000606752 NUP98P52948 1817 aa26.53■■□□□ 1.84
USP6NL-204ENST00000606752 UBN2Q6ZU65 1347 aa26.53■■□□□ 1.84
USP6NL-204ENST00000606752 RPS6KA4O75676 772 aa26.53■■□□□ 1.84
USP6NL-204ENST00000606752 SDSP20132 328 aa26.52■■□□□ 1.84
USP6NL-204ENST00000606752 CLEC4GQ6UXB4 293 aa26.52■■□□□ 1.84
USP6NL-204ENST00000606752 ZNF652Q9Y2D9 606 aa26.52■■□□□ 1.84
USP6NL-204ENST00000606752 CDC45O75419 566 aa26.51■■□□□ 1.83
USP6NL-204ENST00000606752 ANKRD36CQ5JPF3 1778 aa26.51■■□□□ 1.83
USP6NL-204ENST00000606752 RGL2O15211 777 aa26.51■■□□□ 1.83
USP6NL-204ENST00000606752 PARP10Q53GL7 1025 aa26.51■■□□□ 1.83
USP6NL-204ENST00000606752 CSF1RP07333 972 aa26.5■■□□□ 1.83
USP6NL-204ENST00000606752 TSHZ3Q63HK5 1081 aa26.5■■□□□ 1.83
USP6NL-204ENST00000606752 TBC1D9Q6ZT07 1266 aa26.5■■□□□ 1.83
USP6NL-204ENST00000606752 SYNE4Q8N205 404 aa26.5■■□□□ 1.83
USP6NL-204ENST00000606752 BRWD3Q6RI45 1802 aa26.49■■□□□ 1.83
USP6NL-204ENST00000606752 RXRBP28702 533 aa26.49■■□□□ 1.83
USP6NL-204ENST00000606752 USP42Q9H9J4 1324 aaKnown RBP26.49■■□□□ 1.83
USP6NL-204ENST00000606752 IRS4O14654 1257 aaPredicted RBP26.49■■□□□ 1.83
USP6NL-204ENST00000606752 LY75O60449 1722 aa26.49■■□□□ 1.83
USP6NL-204ENST00000606752 TRIM37O94972 964 aa26.49■■□□□ 1.83
USP6NL-204ENST00000606752 FBXO41Q8TF61 875 aa26.49■■□□□ 1.83
USP6NL-204ENST00000606752 GNPATO15228 680 aa26.48■■□□□ 1.83
USP6NL-204ENST00000606752 IFIT2P09913 472 aaKnown RBP26.48■■□□□ 1.83
USP6NL-204ENST00000606752 SUSD4Q5VX71 490 aa26.48■■□□□ 1.83
USP6NL-204ENST00000606752 RTCBQ9Y3I0 505 aaKnown RBP26.48■■□□□ 1.83
USP6NL-204ENST00000606752 CCDC57Q2TAC2 916 aa26.47■■□□□ 1.83
USP6NL-204ENST00000606752 AACSQ86V21 672 aa26.47■■□□□ 1.83
USP6NL-204ENST00000606752 UTP14AQ9BVJ6 771 aaKnown RBP26.47■■□□□ 1.83
USP6NL-204ENST00000606752 NIP7Q9Y221 180 aaKnown RBP eCLIP26.47■■□□□ 1.83
USP6NL-204ENST00000606752 TTC41PQ6P2S7 1318 aa26.47■■□□□ 1.83
USP6NL-204ENST00000606752 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.46■■□□□ 1.83
USP6NL-204ENST00000606752 MFAP1P55081 439 aaKnown RBP26.46■■□□□ 1.83
USP6NL-204ENST00000606752 EAF2Q96CJ1 260 aaPredicted RBP26.46■■□□□ 1.83
USP6NL-204ENST00000606752 AK7Q96M32 723 aa26.46■■□□□ 1.83
USP6NL-204ENST00000606752 PDE8AO60658 829 aa26.45■■□□□ 1.82
USP6NL-204ENST00000606752 TTLL11Q8NHH1 800 aa26.45■■□□□ 1.82
USP6NL-204ENST00000606752 PI4K2BQ8TCG2 481 aa26.45■■□□□ 1.82
USP6NL-204ENST00000606752 GPATCH3Q96I76 525 aa26.45■■□□□ 1.82
USP6NL-204ENST00000606752 LRRC4BQ9NT99 713 aa26.45■■□□□ 1.82
USP6NL-204ENST00000606752 NARFQ9UHQ1 456 aa26.45■■□□□ 1.82
USP6NL-204ENST00000606752 SH3TC1Q8TE82 1336 aa26.45■■□□□ 1.82
USP6NL-204ENST00000606752 EIF5BO60841 1220 aaKnown RBP26.44■■□□□ 1.82
USP6NL-204ENST00000606752 CTSWP56202 376 aa26.44■■□□□ 1.82
USP6NL-204ENST00000606752 SLC27A3Q5K4L6 730 aa26.44■■□□□ 1.82
USP6NL-204ENST00000606752 ECHDC1Q9NTX5 307 aa26.44■■□□□ 1.82
USP6NL-204ENST00000606752 EYA2O00167 538 aa26.43■■□□□ 1.82
USP6NL-204ENST00000606752 CIAO1O76071 339 aa26.43■■□□□ 1.82
USP6NL-204ENST00000606752 IL15P40933 162 aaPredicted RBP26.43■■□□□ 1.82
USP6NL-204ENST00000606752 TFCP2Q12800 502 aa26.43■■□□□ 1.82
USP6NL-204ENST00000606752 IFIT5Q13325 482 aaKnown RBP26.43■■□□□ 1.82
USP6NL-204ENST00000606752 CASC1Q6TDU7 716 aa26.43■■□□□ 1.82
USP6NL-204ENST00000606752 ATG9AQ7Z3C6 839 aa26.43■■□□□ 1.82
USP6NL-204ENST00000606752 TBC1D32Q96NH3 1257 aa26.43■■□□□ 1.82
USP6NL-204ENST00000606752 FBXO3Q9UK99 471 aa26.43■■□□□ 1.82
USP6NL-204ENST00000606752 ERC2O15083 957 aa26.42■■□□□ 1.82
USP6NL-204ENST00000606752 GLRX3O76003 335 aaKnown RBP26.42■■□□□ 1.82
USP6NL-204ENST00000606752 SMIM5Q71RC9 77 aa26.42■■□□□ 1.82
USP6NL-204ENST00000606752 ZNF594Q96JF6 807 aaPredicted RBP26.42■■□□□ 1.82
USP6NL-204ENST00000606752 IPO9Q96P70 1041 aaKnown RBP26.42■■□□□ 1.82
USP6NL-204ENST00000606752 TRIM6-TRIM34B2RNG4 842 aa26.42■■□□□ 1.82
USP6NL-204ENST00000606752 HSP90B1P14625 803 aaKnown RBP26.42■■□□□ 1.82
USP6NL-204ENST00000606752 CCDC8Q9H0W5 538 aaPredicted RBP26.42■■□□□ 1.82
USP6NL-204ENST00000606752 FAM177BA6PVY3 158 aa26.41■■□□□ 1.82
USP6NL-204ENST00000606752 ZPR1O75312 459 aa26.41■■□□□ 1.82
USP6NL-204ENST00000606752 NTSR2O95665 410 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms