RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 INTS3Q68E01 1043 aaKnown RBP18.31■□□□□ 0.52
PPFIA3-206ENST00000602655 NUCB1Q02818 461 aa18.31■□□□□ 0.52
PPFIA3-206ENST00000602655 TNS3Q68CZ2 1445 aa18.3■□□□□ 0.52
PPFIA3-206ENST00000602655 HMMRO75330 724 aa18.3■□□□□ 0.52
PPFIA3-206ENST00000602655 C16orf45Q96MC5 204 aaPredicted RBP18.3■□□□□ 0.52
PPFIA3-206ENST00000602655 ST18O60284 1047 aa18.3■□□□□ 0.52
PPFIA3-206ENST00000602655 GTF2F1P35269 517 aaKnown RBP eCLIP18.3■□□□□ 0.525e-6■■■■□ 24.4
PPFIA3-206ENST00000602655 TMOD3Q9NYL9 352 aa18.3■□□□□ 0.52
PPFIA3-206ENST00000602655 PTPRCP08575 1304 aa18.3■□□□□ 0.52
PPFIA3-206ENST00000602655 NCOA3Q9Y6Q9 1424 aa18.3■□□□□ 0.52
PPFIA3-206ENST00000602655 HCLS1P14317 486 aaPredicted RBP18.29■□□□□ 0.52
PPFIA3-206ENST00000602655 FMN2Q9NZ56 1722 aa18.29■□□□□ 0.52
PPFIA3-206ENST00000602655 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.29■□□□□ 0.52
PPFIA3-206ENST00000602655 V9GYY5 206 aaPredicted RBP18.29■□□□□ 0.52
PPFIA3-206ENST00000602655 ANKRD26Q9UPS8 1709 aa18.29■□□□□ 0.52
PPFIA3-206ENST00000602655 PHF14O94880 888 aa18.29■□□□□ 0.52
PPFIA3-206ENST00000602655 UBE3BQ7Z3V4 1068 aa18.29■□□□□ 0.52
PPFIA3-206ENST00000602655 DTNBO60941 627 aa18.28■□□□□ 0.52
PPFIA3-206ENST00000602655 FAM98CQ17RN3 349 aaKnown RBP18.28■□□□□ 0.52
PPFIA3-206ENST00000602655 TTLL7Q6ZT98 887 aa18.28■□□□□ 0.52
PPFIA3-206ENST00000602655 RABEP1Q15276 862 aa18.28■□□□□ 0.52
PPFIA3-206ENST00000602655 NCBP3Q53F19 620 aaKnown RBP18.28■□□□□ 0.52
PPFIA3-206ENST00000602655 ANKRD44Q8N8A2 993 aa18.28■□□□□ 0.52
PPFIA3-206ENST00000602655 DCAF5Q96JK2 942 aa18.28■□□□□ 0.52
PPFIA3-206ENST00000602655 EXOC5O00471 708 aa18.28■□□□□ 0.52
PPFIA3-206ENST00000602655 GNAI3P08754 354 aa18.28■□□□□ 0.52
PPFIA3-206ENST00000602655 WDR17Q8IZU2 1322 aa18.27■□□□□ 0.52
PPFIA3-206ENST00000602655 SLFN14P0C7P3 912 aa18.27■□□□□ 0.52
PPFIA3-206ENST00000602655 NEXNQ0ZGT2 675 aa18.27■□□□□ 0.52
PPFIA3-206ENST00000602655 FMNL2Q96PY5 1086 aa18.27■□□□□ 0.52
PPFIA3-206ENST00000602655 DHX37Q8IY37 1157 aaKnown RBP18.27■□□□□ 0.52
PPFIA3-206ENST00000602655 AK9Q5TCS8 1911 aa18.27■□□□□ 0.51
PPFIA3-206ENST00000602655 MEGF6O75095 1541 aa18.27■□□□□ 0.51
PPFIA3-206ENST00000602655 KRT222Q8N1A0 295 aa18.26■□□□□ 0.51
PPFIA3-206ENST00000602655 NDUFB9Q9Y6M9 179 aa18.26■□□□□ 0.51
PPFIA3-206ENST00000602655 RTL1A6NKG5 1358 aa18.26■□□□□ 0.51
PPFIA3-206ENST00000602655 TERF2Q15554 542 aa18.26■□□□□ 0.51
PPFIA3-206ENST00000602655 GCC1Q96CN9 775 aa18.26■□□□□ 0.51
PPFIA3-206ENST00000602655 SNRPA1P09661 255 aaKnown RBP18.25■□□□□ 0.51
PPFIA3-206ENST00000602655 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
PPFIA3-206ENST00000602655 PYCARDQ9ULZ3 195 aa18.25■□□□□ 0.51
PPFIA3-206ENST00000602655 TBC1D2BQ9UPU7 963 aa18.25■□□□□ 0.51
PPFIA3-206ENST00000602655 SOS2Q07890 1332 aaPredicted RBP18.25■□□□□ 0.51
PPFIA3-206ENST00000602655 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
PPFIA3-206ENST00000602655 MEX3CQ5U5Q3 659 aaKnown RBP18.25■□□□□ 0.51
PPFIA3-206ENST00000602655 ANKRD13DQ6ZTN6 518 aa18.25■□□□□ 0.51
PPFIA3-206ENST00000602655 CCDC8Q9H0W5 538 aaPredicted RBP18.25■□□□□ 0.51
PPFIA3-206ENST00000602655 CWC22Q9HCG8 908 aaKnown RBP18.25■□□□□ 0.51
PPFIA3-206ENST00000602655 CCDC112Q8NEF3 446 aa18.25■□□□□ 0.51
PPFIA3-206ENST00000602655 RPAP2Q8IXW5 612 aaPredicted RBP18.24■□□□□ 0.51
PPFIA3-206ENST00000602655 DDX58O95786 925 aaKnown RBP18.24■□□□□ 0.51
PPFIA3-206ENST00000602655 BMP2KLQ5H9B9 411 aa18.24■□□□□ 0.51
PPFIA3-206ENST00000602655 TOPAZ1Q8N9V7 1692 aa18.23■□□□□ 0.51
PPFIA3-206ENST00000602655 A0A087WZG4 1122 aa18.23■□□□□ 0.51
PPFIA3-206ENST00000602655 GOLGA6L6A8MZA4 724 aa18.23■□□□□ 0.51
PPFIA3-206ENST00000602655 TOM1O60784 492 aa18.23■□□□□ 0.51
PPFIA3-206ENST00000602655 CDC45O75419 566 aa18.23■□□□□ 0.51
PPFIA3-206ENST00000602655 CLEC17AQ6ZS10 378 aa18.23■□□□□ 0.51
PPFIA3-206ENST00000602655 DCTPP1Q9H773 170 aa18.23■□□□□ 0.51
PPFIA3-206ENST00000602655 TAOK2Q9UL54 1235 aa18.23■□□□□ 0.51
PPFIA3-206ENST00000602655 NCBP1Q09161 790 aaKnown RBP18.23■□□□□ 0.51
PPFIA3-206ENST00000602655 PLEKHM2Q8IWE5 1019 aa18.23■□□□□ 0.51
PPFIA3-206ENST00000602655 RGS22Q8NE09 1264 aa18.22■□□□□ 0.51
PPFIA3-206ENST00000602655 LRRCC1Q9C099 1032 aa18.22■□□□□ 0.51
PPFIA3-206ENST00000602655 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
PPFIA3-206ENST00000602655 TEX2Q8IWB9 1127 aa18.22■□□□□ 0.51
PPFIA3-206ENST00000602655 CTNNA3Q9UI47 895 aa18.22■□□□□ 0.51
PPFIA3-206ENST00000602655 CAPN2P17655 700 aa18.22■□□□□ 0.51
PPFIA3-206ENST00000602655 SYNE4Q8N205 404 aa18.22■□□□□ 0.51
PPFIA3-206ENST00000602655 ANKRD7Q92527 254 aa18.22■□□□□ 0.51
PPFIA3-206ENST00000602655 BEND3Q5T5X7 828 aa18.21■□□□□ 0.51
PPFIA3-206ENST00000602655 BICDL1Q6ZP65 573 aa18.21■□□□□ 0.51
PPFIA3-206ENST00000602655 NRKQ7Z2Y5 1582 aa18.21■□□□□ 0.51
PPFIA3-206ENST00000602655 TNNT1P13805 278 aa18.21■□□□□ 0.51
PPFIA3-206ENST00000602655 GSPT1P15170 499 aaKnown RBP18.21■□□□□ 0.51
PPFIA3-206ENST00000602655 PIGBQ92521 554 aa18.21■□□□□ 0.51
PPFIA3-206ENST00000602655 BICC1Q9H694 974 aaKnown RBP18.21■□□□□ 0.51
PPFIA3-206ENST00000602655 KCNQ2O43526 872 aa18.21■□□□□ 0.51
PPFIA3-206ENST00000602655 SUCLG2Q96I99 432 aa18.21■□□□□ 0.51
PPFIA3-206ENST00000602655 DDX21Q9NR30 783 aaKnown RBP eCLIP18.21■□□□□ 0.51
PPFIA3-206ENST00000602655 EP400Q96L91 3159 aa18.2■□□□□ 0.5
PPFIA3-206ENST00000602655 SOS1Q07889 1333 aaPredicted RBP18.2■□□□□ 0.5
PPFIA3-206ENST00000602655 CCDC24Q8N4L8 307 aa18.2■□□□□ 0.5
PPFIA3-206ENST00000602655 ST7Q9NRC1 585 aa18.2■□□□□ 0.5
PPFIA3-206ENST00000602655 RGPD2P0DJD1 1756 aa18.2■□□□□ 0.5
PPFIA3-206ENST00000602655 GADD45BO75293 160 aaPredicted RBP18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 DDB1Q16531 1140 aa18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 TPD52L1Q16890 204 aaPredicted RBP18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 FAM184AQ8NB25 1140 aa18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 RSPH14Q9UHP6 348 aa18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 DDX41Q9UJV9 622 aaKnown RBP18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 VIRMAQ69YN4 1812 aaKnown RBP18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 NFAT5O94916 1531 aa18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 SDSP20132 328 aa18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 NEK4P51957 841 aa18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 NEUROD6Q96NK8 337 aa18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 LARP6Q9BRS8 491 aaKnown RBP18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 HYPKQ9NX55 129 aa18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 KIF24Q5T7B8 1368 aa18.19■□□□□ 0.5
PPFIA3-206ENST00000602655 STRCP1A6NGW2 1772 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms