RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-233ENST00000602421 EPHA10Q5JZY3 1008 aa22.27■■□□□ 1.16
MACF1-233ENST00000602421 CLEC4GQ6UXB4 293 aa22.27■■□□□ 1.16
MACF1-233ENST00000602421 EXOC6BQ9Y2D4 811 aa22.27■■□□□ 1.16
MACF1-233ENST00000602421 APBB1O00213 710 aa22.26■■□□□ 1.15
MACF1-233ENST00000602421 SURF6O75683 361 aaKnown RBP22.26■■□□□ 1.15
MACF1-233ENST00000602421 NARFQ9UHQ1 456 aa22.26■■□□□ 1.15
MACF1-233ENST00000602421 C4BP0C0L5 1744 aa22.25■■□□□ 1.15
MACF1-233ENST00000602421 TAF1LQ8IZX4 1826 aa22.25■■□□□ 1.15
MACF1-233ENST00000602421 ZPR1O75312 459 aa22.25■■□□□ 1.15
MACF1-233ENST00000602421 RABL6Q3YEC7 729 aaPredicted RBP22.25■■□□□ 1.15
MACF1-233ENST00000602421 PARP10Q53GL7 1025 aa22.25■■□□□ 1.15
MACF1-233ENST00000602421 TRAPPC3LQ5T215 181 aa22.25■■□□□ 1.15
MACF1-233ENST00000602421 TRMT112Q9UI30 125 aaKnown RBP22.25■■□□□ 1.15
MACF1-233ENST00000602421 RAB11FIP3O75154 756 aa22.24■■□□□ 1.15
MACF1-233ENST00000602421 PDE4AP27815 886 aa22.24■■□□□ 1.15
MACF1-233ENST00000602421 HSP90AB4PQ58FF6 505 aa22.24■■□□□ 1.15
MACF1-233ENST00000602421 SMIM5Q71RC9 77 aa22.24■■□□□ 1.15
MACF1-233ENST00000602421 PROM2Q8N271 834 aa22.24■■□□□ 1.15
MACF1-233ENST00000602421 FAM89AQ96GI7 184 aa22.24■■□□□ 1.15
MACF1-233ENST00000602421 NIP7Q9Y221 180 aaKnown RBP eCLIP22.24■■□□□ 1.15
MACF1-233ENST00000602421 UBN2Q6ZU65 1347 aa22.24■■□□□ 1.15
MACF1-233ENST00000602421 NUP98P52948 1817 aa22.23■■□□□ 1.15
MACF1-233ENST00000602421 ADRA2BP18089 450 aa22.23■■□□□ 1.15
MACF1-233ENST00000602421 FOXO4P98177 505 aa22.23■■□□□ 1.15
MACF1-233ENST00000602421 ARHGEF1Q92888 912 aaKnown RBP22.23■■□□□ 1.15
MACF1-233ENST00000602421 PHF14O94880 888 aa22.23■■□□□ 1.15
MACF1-233ENST00000602421 RFC4P35249 363 aa22.23■■□□□ 1.15
MACF1-233ENST00000602421 USPL1Q5W0Q7 1092 aa22.23■■□□□ 1.15
MACF1-233ENST00000602421 LMBR1LQ6UX01 489 aa22.23■■□□□ 1.15
MACF1-233ENST00000602421 ILDR1Q86SU0 546 aaPredicted RBP22.23■■□□□ 1.15
MACF1-233ENST00000602421 LRRCC1Q9C099 1032 aa22.23■■□□□ 1.15
MACF1-233ENST00000602421 CDHR2Q9BYE9 1310 aa22.22■■□□□ 1.15
MACF1-233ENST00000602421 ANKRD36CQ5JPF3 1778 aa22.22■■□□□ 1.15
MACF1-233ENST00000602421 UTP14AQ9BVJ6 771 aaKnown RBP22.22■■□□□ 1.15
MACF1-233ENST00000602421 SRP68Q9UHB9 627 aaKnown RBP22.22■■□□□ 1.15
MACF1-233ENST00000602421 NOP58Q9Y2X3 529 aaKnown RBP22.22■■□□□ 1.15
MACF1-233ENST00000602421 SMARCA5O60264 1052 aaPredicted RBP22.21■■□□□ 1.15
MACF1-233ENST00000602421 OS9Q13438 667 aaPredicted RBP22.21■■□□□ 1.15
MACF1-233ENST00000602421 SUSD4Q5VX71 490 aa22.21■■□□□ 1.15
MACF1-233ENST00000602421 AMIGO3Q86WK7 504 aa22.21■■□□□ 1.15
MACF1-233ENST00000602421 PLA2G12BQ9BX93 195 aa22.21■■□□□ 1.15
MACF1-233ENST00000602421 CHMP3Q9Y3E7 222 aa22.21■■□□□ 1.15
MACF1-233ENST00000602421 BCL11AQ9H165 835 aa22.2■■□□□ 1.14
MACF1-233ENST00000602421 BCL2L12Q9HB09 334 aa22.2■■□□□ 1.14
MACF1-233ENST00000602421 PA2G4Q9UQ80 394 aaKnown RBP22.2■■□□□ 1.14
MACF1-233ENST00000602421 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.19■■□□□ 1.14
MACF1-233ENST00000602421 FAM177BA6PVY3 158 aa22.19■■□□□ 1.14
MACF1-233ENST00000602421 IRS4O14654 1257 aaPredicted RBP22.19■■□□□ 1.14
MACF1-233ENST00000602421 SSFA2P28290 1259 aa22.19■■□□□ 1.14
MACF1-233ENST00000602421 G3BP1Q13283 466 aaKnown RBP eCLIP22.19■■□□□ 1.14
MACF1-233ENST00000602421 SH3TC1Q8TE82 1336 aa22.19■■□□□ 1.14
MACF1-233ENST00000602421 BCORQ6W2J9 1755 aa22.19■■□□□ 1.14
MACF1-233ENST00000602421 ERC1Q8IUD2 1116 aa22.18■■□□□ 1.14
MACF1-233ENST00000602421 SYNE4Q8N205 404 aa22.18■■□□□ 1.14
MACF1-233ENST00000602421 KIF1BPQ96EK5 621 aa22.18■■□□□ 1.14
MACF1-233ENST00000602421 USP42Q9H9J4 1324 aaKnown RBP22.18■■□□□ 1.14
MACF1-233ENST00000602421 HSP90B1P14625 803 aaKnown RBP22.17■■□□□ 1.14
MACF1-233ENST00000602421 RHPN1Q8TCX5 695 aa22.17■■□□□ 1.14
MACF1-233ENST00000602421 COPRSQ9NQ92 184 aa22.17■■□□□ 1.14
MACF1-233ENST00000602421 PDE8AO60658 829 aa22.16■■□□□ 1.14
MACF1-233ENST00000602421 RFX5P48382 616 aaPredicted RBP22.16■■□□□ 1.14
MACF1-233ENST00000602421 TBC1D9BQ66K14 1250 aa22.16■■□□□ 1.14
MACF1-233ENST00000602421 BICDL1Q6ZP65 573 aa22.16■■□□□ 1.14
MACF1-233ENST00000602421 SETDB2Q96T68 719 aa22.16■■□□□ 1.14
MACF1-233ENST00000602421 SCN7AQ01118 1682 aa22.16■■□□□ 1.14
MACF1-233ENST00000602421 TNS1Q9HBL0 1735 aaKnown RBP22.15■■□□□ 1.14
MACF1-233ENST00000602421 NTSR2O95665 410 aa22.15■■□□□ 1.14
MACF1-233ENST00000602421 SF3B2Q13435 895 aaKnown RBP22.15■■□□□ 1.14
MACF1-233ENST00000602421 C16orf71Q8IYS4 520 aaPredicted RBP22.15■■□□□ 1.14
MACF1-233ENST00000602421 CSF1RP07333 972 aa22.14■■□□□ 1.14
MACF1-233ENST00000602421 PTPN12Q05209 780 aaKnown RBP22.14■■□□□ 1.14
MACF1-233ENST00000602421 CCDC57Q2TAC2 916 aa22.14■■□□□ 1.14
MACF1-233ENST00000602421 KLHDC4Q8TBB5 520 aa22.14■■□□□ 1.14
MACF1-233ENST00000602421 SIL1Q9H173 461 aa22.14■■□□□ 1.14
MACF1-233ENST00000602421 TFCP2L1Q9NZI6 479 aa22.14■■□□□ 1.14
MACF1-233ENST00000602421 EP400Q96L91 3159 aa22.14■■□□□ 1.13
MACF1-233ENST00000602421 CTSWP56202 376 aa22.14■■□□□ 1.13
MACF1-233ENST00000602421 PLEKHM2Q8IWE5 1019 aa22.14■■□□□ 1.13
MACF1-233ENST00000602421 AKT1S1Q96B36 256 aa22.14■■□□□ 1.13
MACF1-233ENST00000602421 IL1RAPL2Q9NP60 686 aa22.14■■□□□ 1.13
MACF1-233ENST00000602421 NYXQ9GZU5 481 aa22.13■■□□□ 1.13
MACF1-233ENST00000602421 HCLS1P14317 486 aaPredicted RBP22.12■■□□□ 1.13
MACF1-233ENST00000602421 EN1Q05925 392 aaPredicted RBP22.12■■□□□ 1.13
MACF1-233ENST00000602421 ZNF827Q17R98 1081 aa22.12■■□□□ 1.13
MACF1-233ENST00000602421 TTLL11Q8NHH1 800 aa22.12■■□□□ 1.13
MACF1-233ENST00000602421 UBR3Q6ZT12 1888 aa22.11■■□□□ 1.13
MACF1-233ENST00000602421 GTF2E1P29083 439 aaPredicted RBP22.11■■□□□ 1.13
MACF1-233ENST00000602421 IFIT5Q13325 482 aaKnown RBP22.11■■□□□ 1.13
MACF1-233ENST00000602421 FAM161AQ3B820 660 aa22.11■■□□□ 1.13
MACF1-233ENST00000602421 NUTM1Q86Y26 1132 aa22.11■■□□□ 1.13
MACF1-233ENST00000602421 CLASRPQ8N2M8 674 aaKnown RBP22.11■■□□□ 1.13
MACF1-233ENST00000602421 OTUD7AQ8TE49 926 aaPredicted RBP22.11■■□□□ 1.13
MACF1-233ENST00000602421 CCDC85AQ96PX6 553 aaPredicted RBP22.11■■□□□ 1.13
MACF1-233ENST00000602421 CAMKK2Q96RR4 588 aa22.11■■□□□ 1.13
MACF1-233ENST00000602421 BAG6P46379 1132 aa22.1■■□□□ 1.13
MACF1-233ENST00000602421 EZH2Q15910 746 aaKnown RBP22.1■■□□□ 1.13
MACF1-233ENST00000602421 TAF7LQ5H9L4 462 aa22.1■■□□□ 1.13
MACF1-233ENST00000602421 NBPF5PQ86XG9 351 aaPredicted RBP22.1■■□□□ 1.13
MACF1-233ENST00000602421 FLAD1Q8NFF5 587 aa22.1■■□□□ 1.13
MACF1-233ENST00000602421 TSHZ2Q9NRE2 1034 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms