RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 MIER1Q8N108 512 aa12.35□□□□□ -0.43
LINC00649-212ENST00000601471 ISCA1Q9BUE6 129 aa12.35□□□□□ -0.43
LINC00649-212ENST00000601471 VAMP4O75379 141 aa12.34□□□□□ -0.43
LINC00649-212ENST00000601471 NPR1P16066 1061 aa12.34□□□□□ -0.43
LINC00649-212ENST00000601471 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
LINC00649-212ENST00000601471 SLC10A5Q5PT55 438 aa12.34□□□□□ -0.43
LINC00649-212ENST00000601471 PPP1R42Q7Z4L9 355 aa12.34□□□□□ -0.43
LINC00649-212ENST00000601471 NUTM1Q86Y26 1132 aa12.34□□□□□ -0.43
LINC00649-212ENST00000601471 MASTLQ96GX5 879 aa12.34□□□□□ -0.43
LINC00649-212ENST00000601471 NPHP1O15259 732 aa12.33□□□□□ -0.44
LINC00649-212ENST00000601471 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
LINC00649-212ENST00000601471 C7orf43Q8WVR3 580 aa12.33□□□□□ -0.44
LINC00649-212ENST00000601471 UTP14AQ9BVJ6 771 aaKnown RBP12.33□□□□□ -0.44
LINC00649-212ENST00000601471 LRRC37AA6NMS7 1700 aa12.32□□□□□ -0.44
LINC00649-212ENST00000601471 TIAM2Q8IVF5 1701 aa12.32□□□□□ -0.44
LINC00649-212ENST00000601471 FAM177BA6PVY3 158 aa12.32□□□□□ -0.44
LINC00649-212ENST00000601471 E9PSI1 815 aa12.32□□□□□ -0.44
LINC00649-212ENST00000601471 PRPF40BQ6NWY9 871 aaKnown RBP12.32□□□□□ -0.44
LINC00649-212ENST00000601471 TRMT2AQ8IZ69 625 aaKnown RBP12.32□□□□□ -0.44
LINC00649-212ENST00000601471 ZNF784Q8NCA9 323 aaPredicted RBP12.32□□□□□ -0.44
LINC00649-212ENST00000601471 CNKSR1Q969H4 720 aa12.32□□□□□ -0.44
LINC00649-212ENST00000601471 STK31Q9BXU1 1019 aa12.32□□□□□ -0.44
LINC00649-212ENST00000601471 SH3TC1Q8TE82 1336 aa12.32□□□□□ -0.44
LINC00649-212ENST00000601471 DICER1Q9UPY3 1922 aaKnown RBP12.31□□□□□ -0.44
LINC00649-212ENST00000601471 NFKBIEO00221 500 aa12.31□□□□□ -0.44
LINC00649-212ENST00000601471 DDX58O95786 925 aaKnown RBP12.31□□□□□ -0.44
LINC00649-212ENST00000601471 GTF2E1P29083 439 aaPredicted RBP12.31□□□□□ -0.44
LINC00649-212ENST00000601471 SLFN5Q08AF3 891 aa12.31□□□□□ -0.44
LINC00649-212ENST00000601471 C3orf67Q6ZVT6 689 aa12.31□□□□□ -0.44
LINC00649-212ENST00000601471 LTBP3Q9NS15 1303 aa12.31□□□□□ -0.44
LINC00649-212ENST00000601471 SLC4A2P04920 1241 aa12.3□□□□□ -0.44
LINC00649-212ENST00000601471 PRELPP51888 382 aa12.3□□□□□ -0.44
LINC00649-212ENST00000601471 KSR2Q6VAB6 950 aa12.3□□□□□ -0.44
LINC00649-212ENST00000601471 ARHGAP27Q6ZUM4 889 aa12.3□□□□□ -0.44
LINC00649-212ENST00000601471 G2E3Q7L622 706 aa12.3□□□□□ -0.44
LINC00649-212ENST00000601471 RIC3Q7Z5B4 369 aa12.3□□□□□ -0.44
LINC00649-212ENST00000601471 ZNF622Q969S3 477 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC00649-212ENST00000601471 METTL22Q9BUU2 404 aaPredicted RBP12.3□□□□□ -0.44
LINC00649-212ENST00000601471 PI4KAP2A4QPH2 592 aa12.29□□□□□ -0.44
LINC00649-212ENST00000601471 ATP5J2-PTCD1G3V325 749 aa12.29□□□□□ -0.44
LINC00649-212ENST00000601471 FLIIQ13045 1269 aa12.29□□□□□ -0.44
LINC00649-212ENST00000601471 SOGA3Q5TF21 947 aa12.29□□□□□ -0.44
LINC00649-212ENST00000601471 PI4KAP1Q8N8J0 262 aa12.29□□□□□ -0.44
LINC00649-212ENST00000601471 CCDC191Q8NCU4 936 aa12.29□□□□□ -0.44
LINC00649-212ENST00000601471 TRMT112Q9UI30 125 aaKnown RBP12.29□□□□□ -0.44
LINC00649-212ENST00000601471 MAP3K2Q9Y2U5 619 aa12.29□□□□□ -0.44
LINC00649-212ENST00000601471 ZC3H4Q9UPT8 1303 aaKnown RBP12.29□□□□□ -0.44
LINC00649-212ENST00000601471 CCDC88AQ3V6T2 1871 aa12.28□□□□□ -0.44
LINC00649-212ENST00000601471 C21orf2O43822 256 aa12.28□□□□□ -0.44
LINC00649-212ENST00000601471 IGKV5-2P06315 115 aa12.28□□□□□ -0.44
LINC00649-212ENST00000601471 ALDH1B1P30837 517 aa12.28□□□□□ -0.44
LINC00649-212ENST00000601471 SYNE4Q8N205 404 aa12.28□□□□□ -0.44
LINC00649-212ENST00000601471 NLRP3Q96P20 1036 aa12.28□□□□□ -0.44
LINC00649-212ENST00000601471 CRAMP1Q96RY5 1269 aa12.28□□□□□ -0.44
LINC00649-212ENST00000601471 COL4A1P02462 1669 aa12.28□□□□□ -0.44
LINC00649-212ENST00000601471 LTBP1Q14766 1721 aa12.28□□□□□ -0.44
LINC00649-212ENST00000601471 TCERG1O14776 1098 aaKnown RBP12.27□□□□□ -0.45
LINC00649-212ENST00000601471 RASSF7Q02833 373 aa12.27□□□□□ -0.45
LINC00649-212ENST00000601471 ZBTB38Q8NAP3 1195 aaPredicted RBP12.27□□□□□ -0.45
LINC00649-212ENST00000601471 RPGRQ92834 1020 aaKnown RBP12.27□□□□□ -0.45
LINC00649-212ENST00000601471 ZNF428Q96B54 188 aa12.27□□□□□ -0.45
LINC00649-212ENST00000601471 CDCA7LQ96GN5 454 aa12.27□□□□□ -0.45
LINC00649-212ENST00000601471 MYD88Q99836 296 aa12.27□□□□□ -0.45
LINC00649-212ENST00000601471 MYH3P11055 1940 aa12.27□□□□□ -0.45
LINC00649-212ENST00000601471 PCCAP05165 728 aaPredicted RBP12.26□□□□□ -0.45
LINC00649-212ENST00000601471 HCLS1P14317 486 aaPredicted RBP12.26□□□□□ -0.45
LINC00649-212ENST00000601471 LMNB1P20700 586 aa12.26□□□□□ -0.45
LINC00649-212ENST00000601471 SF3B3Q15393 1217 aaKnown RBP12.26□□□□□ -0.45
LINC00649-212ENST00000601471 CCDC93Q567U6 631 aa12.26□□□□□ -0.45
LINC00649-212ENST00000601471 C9orf131Q5VYM1 1079 aa12.26□□□□□ -0.45
LINC00649-212ENST00000601471 FAM89AQ96GI7 184 aa12.26□□□□□ -0.45
LINC00649-212ENST00000601471 CWC25Q9NXE8 425 aaPredicted RBP12.26□□□□□ -0.45
LINC00649-212ENST00000601471 ABCC4O15439 1325 aa12.26□□□□□ -0.45
LINC00649-212ENST00000601471 CDHR2Q9BYE9 1310 aa12.26□□□□□ -0.45
LINC00649-212ENST00000601471 DUOX1Q9NRD9 1551 aa12.26□□□□□ -0.45
LINC00649-212ENST00000601471 TAF1P21675 1872 aa12.25□□□□□ -0.45
LINC00649-212ENST00000601471 NEURL1BA8MQ27 555 aa12.25□□□□□ -0.45
LINC00649-212ENST00000601471 CT47B1P0C2W7 299 aaPredicted RBP12.25□□□□□ -0.45
LINC00649-212ENST00000601471 FKBP5Q13451 457 aaPredicted RBP12.25□□□□□ -0.45
LINC00649-212ENST00000601471 DNAAF4Q8WXU2 420 aa12.25□□□□□ -0.45
LINC00649-212ENST00000601471 RBM17Q96I25 401 aaKnown RBP12.25□□□□□ -0.45
LINC00649-212ENST00000601471 TAOK3Q9H2K8 898 aa12.25□□□□□ -0.45
LINC00649-212ENST00000601471 RNF181Q9P0P0 153 aa12.25□□□□□ -0.45
LINC00649-212ENST00000601471 IRS4O14654 1257 aaPredicted RBP12.24□□□□□ -0.45
LINC00649-212ENST00000601471 PPEF1O14829 653 aaPredicted RBP12.24□□□□□ -0.45
LINC00649-212ENST00000601471 COL4A5P29400 1685 aa12.24□□□□□ -0.45
LINC00649-212ENST00000601471 CC2D2BQ6DHV5 1058 aa12.24□□□□□ -0.45
LINC00649-212ENST00000601471 OLFM4Q6UX06 510 aa12.24□□□□□ -0.45
LINC00649-212ENST00000601471 LINS1Q8NG48 757 aa12.24□□□□□ -0.45
LINC00649-212ENST00000601471 PSMD1Q99460 953 aa12.24□□□□□ -0.45
LINC00649-212ENST00000601471 RTL9Q8NET4 1388 aa12.23□□□□□ -0.45
LINC00649-212ENST00000601471 HSP90B1P14625 803 aaKnown RBP12.23□□□□□ -0.45
LINC00649-212ENST00000601471 CASP7P55210 303 aa12.23□□□□□ -0.45
LINC00649-212ENST00000601471 FKBP4Q02790 459 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC00649-212ENST00000601471 NEXNQ0ZGT2 675 aa12.23□□□□□ -0.45
LINC00649-212ENST00000601471 GRAPQ13588 217 aa12.23□□□□□ -0.45
LINC00649-212ENST00000601471 CWF19L2Q2TBE0 894 aaKnown RBP12.23□□□□□ -0.45
LINC00649-212ENST00000601471 ALDH1L2Q3SY69 923 aa12.23□□□□□ -0.45
LINC00649-212ENST00000601471 GRIPAP1Q4V328 841 aa12.23□□□□□ -0.45
LINC00649-212ENST00000601471 SLC51AQ86UW1 340 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms