RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 RFC4P35249 363 aa28.14■■■□□ 2.1
IRF3-228ENST00000601291 CASP7P55210 303 aa28.14■■■□□ 2.1
IRF3-228ENST00000601291 MTX1Q13505 466 aa28.14■■■□□ 2.1
IRF3-228ENST00000601291 PARP10Q53GL7 1025 aa28.14■■■□□ 2.1
IRF3-228ENST00000601291 UBR3Q6ZT12 1888 aa28.13■■■□□ 2.09
IRF3-228ENST00000601291 PPP1R42Q7Z4L9 355 aa28.13■■■□□ 2.09
IRF3-228ENST00000601291 ZBTB38Q8NAP3 1195 aaPredicted RBP28.13■■■□□ 2.09
IRF3-228ENST00000601291 BICC1Q9H694 974 aaKnown RBP28.13■■■□□ 2.09
IRF3-228ENST00000601291 PNMA6EA0A0J9YXQ4 647 aa28.12■■■□□ 2.09
IRF3-228ENST00000601291 SRGAP3O43295 1099 aa28.12■■■□□ 2.09
IRF3-228ENST00000601291 DCTPP1Q9H773 170 aa28.12■■■□□ 2.09
IRF3-228ENST00000601291 C4AP0C0L4 1744 aa28.12■■■□□ 2.09
IRF3-228ENST00000601291 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.11■■■□□ 2.09
IRF3-228ENST00000601291 USPL1Q5W0Q7 1092 aa28.11■■■□□ 2.09
IRF3-228ENST00000601291 SMIM5Q71RC9 77 aa28.11■■■□□ 2.09
IRF3-228ENST00000601291 AMIGO3Q86WK7 504 aa28.11■■■□□ 2.09
IRF3-228ENST00000601291 SSH3Q8TE77 659 aa28.11■■■□□ 2.09
IRF3-228ENST00000601291 JARID2Q92833 1246 aaPredicted RBP28.11■■■□□ 2.09
IRF3-228ENST00000601291 KAZALD1Q96I82 304 aa28.11■■■□□ 2.09
IRF3-228ENST00000601291 NIP7Q9Y221 180 aaKnown RBP eCLIP28.11■■■□□ 2.09
IRF3-228ENST00000601291 UBN2Q6ZU65 1347 aa28.11■■■□□ 2.09
IRF3-228ENST00000601291 USP42Q9H9J4 1324 aaKnown RBP28.11■■■□□ 2.09
IRF3-228ENST00000601291 BAG6P46379 1132 aa28.11■■■□□ 2.09
IRF3-228ENST00000601291 RTL5Q5HYW3 569 aaPredicted RBP28.1■■■□□ 2.09
IRF3-228ENST00000601291 TRMT112Q9UI30 125 aaKnown RBP28.1■■■□□ 2.09
IRF3-228ENST00000601291 POLA2Q14181 598 aa28.09■■■□□ 2.09
IRF3-228ENST00000601291 SRP68Q9UHB9 627 aaKnown RBP28.09■■■□□ 2.09
IRF3-228ENST00000601291 CDHR2Q9BYE9 1310 aa28.09■■■□□ 2.09
IRF3-228ENST00000601291 EN1Q05925 392 aaPredicted RBP28.08■■■□□ 2.09
IRF3-228ENST00000601291 CAMKK2Q96RR4 588 aa28.08■■■□□ 2.09
IRF3-228ENST00000601291 RABL6Q3YEC7 729 aaPredicted RBP28.07■■■□□ 2.08
IRF3-228ENST00000601291 AKT1S1Q96B36 256 aa28.07■■■□□ 2.08
IRF3-228ENST00000601291 FAM89AQ96GI7 184 aa28.07■■■□□ 2.08
IRF3-228ENST00000601291 BCL2L12Q9HB09 334 aa28.07■■■□□ 2.08
IRF3-228ENST00000601291 TFCP2L1Q9NZI6 479 aa28.07■■■□□ 2.08
IRF3-228ENST00000601291 PDZRN3Q9UPQ7 1066 aa28.07■■■□□ 2.08
IRF3-228ENST00000601291 EZH2Q15910 746 aaKnown RBP28.07■■■□□ 2.08
IRF3-228ENST00000601291 UTP14AQ9BVJ6 771 aaKnown RBP28.07■■■□□ 2.08
IRF3-228ENST00000601291 ZNF827Q17R98 1081 aa28.06■■■□□ 2.08
IRF3-228ENST00000601291 EPHA10Q5JZY3 1008 aa28.06■■■□□ 2.08
IRF3-228ENST00000601291 ZBTB47Q9UFB7 747 aaPredicted RBP28.06■■■□□ 2.08
IRF3-228ENST00000601291 NUCB1Q02818 461 aa28.05■■■□□ 2.08
IRF3-228ENST00000601291 SUSD4Q5VX71 490 aa28.05■■■□□ 2.08
IRF3-228ENST00000601291 CCDC125Q86Z20 511 aa28.05■■■□□ 2.08
IRF3-228ENST00000601291 FOXO4P98177 505 aa28.04■■■□□ 2.08
IRF3-228ENST00000601291 FLAD1Q8NFF5 587 aa28.04■■■□□ 2.08
IRF3-228ENST00000601291 PLA2G12BQ9BX93 195 aa28.04■■■□□ 2.08
IRF3-228ENST00000601291 SH3TC1Q8TE82 1336 aa28.04■■■□□ 2.08
IRF3-228ENST00000601291 ANKRD45Q5TZF3 282 aa28.03■■■□□ 2.08
IRF3-228ENST00000601291 TBC1D9BQ66K14 1250 aa28.03■■■□□ 2.08
IRF3-228ENST00000601291 HSP90B1P14625 803 aaKnown RBP28.03■■■□□ 2.08
IRF3-228ENST00000601291 SETDB2Q96T68 719 aa28.03■■■□□ 2.08
IRF3-228ENST00000601291 IRS4O14654 1257 aaPredicted RBP28.02■■■□□ 2.08
IRF3-228ENST00000601291 HSP90AB4PQ58FF6 505 aa28.02■■■□□ 2.08
IRF3-228ENST00000601291 LMBR1LQ6UX01 489 aa28.02■■■□□ 2.08
IRF3-228ENST00000601291 BICDL1Q6ZP65 573 aa28.02■■■□□ 2.08
IRF3-228ENST00000601291 CHD1LQ86WJ1 897 aa28.02■■■□□ 2.08
IRF3-228ENST00000601291 EXOC6BQ9Y2D4 811 aa28.02■■■□□ 2.08
IRF3-228ENST00000601291 FAM177BA6PVY3 158 aa28.01■■■□□ 2.07
IRF3-228ENST00000601291 SURF6O75683 361 aaKnown RBP28.01■■■□□ 2.07
IRF3-228ENST00000601291 NTSR2O95665 410 aa28.01■■■□□ 2.07
IRF3-228ENST00000601291 CHMP3Q9Y3E7 222 aa28■■■□□ 2.07
IRF3-228ENST00000601291 NYXQ9GZU5 481 aa27.99■■■□□ 2.07
IRF3-228ENST00000601291 COL24A1Q17RW2 1714 aa27.99■■■□□ 2.07
IRF3-228ENST00000601291 PDE8AO60658 829 aa27.99■■■□□ 2.07
IRF3-228ENST00000601291 RAB11FIP3O75154 756 aa27.99■■■□□ 2.07
IRF3-228ENST00000601291 RGS3P49796 1198 aa27.98■■■□□ 2.07
IRF3-228ENST00000601291 DEFB132Q7Z7B7 95 aa27.98■■■□□ 2.07
IRF3-228ENST00000601291 SKAP1Q86WV1 359 aa27.98■■■□□ 2.07
IRF3-228ENST00000601291 SYNE4Q8N205 404 aa27.98■■■□□ 2.07
IRF3-228ENST00000601291 LNPKQ9C0E8 428 aa27.98■■■□□ 2.07
IRF3-228ENST00000601291 STK32BQ9NY57 414 aa27.98■■■□□ 2.07
IRF3-228ENST00000601291 NOP58Q9Y2X3 529 aaKnown RBP27.98■■■□□ 2.07
IRF3-228ENST00000601291 CARMIL3Q8ND23 1372 aa27.97■■■□□ 2.07
IRF3-228ENST00000601291 APBB1O00213 710 aa27.97■■■□□ 2.07
IRF3-228ENST00000601291 GYS1P13807 737 aa27.97■■■□□ 2.07
IRF3-228ENST00000601291 LRRCC1Q9C099 1032 aa27.97■■■□□ 2.07
IRF3-228ENST00000601291 TUBGCP6Q96RT7 1819 aa27.97■■■□□ 2.07
IRF3-228ENST00000601291 CTSWP56202 376 aa27.96■■■□□ 2.07
IRF3-228ENST00000601291 OS9Q13438 667 aaPredicted RBP27.96■■■□□ 2.07
IRF3-228ENST00000601291 MSH5O43196 834 aa27.95■■■□□ 2.07
IRF3-228ENST00000601291 GTF2E1P29083 439 aaPredicted RBP27.95■■■□□ 2.07
IRF3-228ENST00000601291 NBPF5PQ86XG9 351 aaPredicted RBP27.95■■■□□ 2.07
IRF3-228ENST00000601291 LAMB2P55268 1798 aa27.95■■■□□ 2.07
IRF3-228ENST00000601291 CSF1RP07333 972 aa27.94■■■□□ 2.06
IRF3-228ENST00000601291 SLC15A2Q16348 729 aa27.94■■■□□ 2.06
IRF3-228ENST00000601291 ERC1Q8IUD2 1116 aa27.94■■■□□ 2.06
IRF3-228ENST00000601291 COPRSQ9NQ92 184 aa27.94■■■□□ 2.06
IRF3-228ENST00000601291 RFX5P48382 616 aaPredicted RBP27.94■■■□□ 2.06
IRF3-228ENST00000601291 NFIXQ14938 502 aa27.94■■■□□ 2.06
IRF3-228ENST00000601291 TPTE2Q6XPS3 522 aa27.94■■■□□ 2.06
IRF3-228ENST00000601291 COL23A1Q86Y22 540 aaPredicted RBP27.94■■■□□ 2.06
IRF3-228ENST00000601291 NUTM1Q86Y26 1132 aa27.94■■■□□ 2.06
IRF3-228ENST00000601291 PA2G4Q9UQ80 394 aaKnown RBP27.94■■■□□ 2.06
IRF3-228ENST00000601291 PNPLA7Q6ZV29 1317 aa27.93■■■□□ 2.06
IRF3-228ENST00000601291 G3BP1Q13283 466 aaKnown RBP eCLIP27.93■■■□□ 2.06
IRF3-228ENST00000601291 CCDC57Q2TAC2 916 aa27.93■■■□□ 2.06
IRF3-228ENST00000601291 ANO8Q9HCE9 1232 aaPredicted RBP27.93■■■□□ 2.06
IRF3-228ENST00000601291 TTLL11Q8NHH1 800 aa27.92■■■□□ 2.06
IRF3-228ENST00000601291 KIF1BPQ96EK5 621 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms