RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 PARP10Q53GL7 1025 aa25.81■■□□□ 1.72
PNKP-215ENST00000600910 MSL1Q68DK7 614 aa25.8■■□□□ 1.72
PNKP-215ENST00000600910 IBTKQ9P2D0 1353 aaPredicted RBP25.79■■□□□ 1.72
PNKP-215ENST00000600910 SUSD4Q5VX71 490 aa25.79■■□□□ 1.72
PNKP-215ENST00000600910 USP44Q9H0E7 712 aa25.79■■□□□ 1.72
PNKP-215ENST00000600910 C9orf78Q9NZ63 289 aaPredicted RBP25.79■■□□□ 1.72
PNKP-215ENST00000600910 CASZ1Q86V15 1759 aa25.79■■□□□ 1.72
PNKP-215ENST00000600910 FAM177BA6PVY3 158 aa25.78■■□□□ 1.72
PNKP-215ENST00000600910 ZBTB7BO15156 539 aaPredicted RBP25.78■■□□□ 1.72
PNKP-215ENST00000600910 TM4SF1P30408 202 aa25.78■■□□□ 1.72
PNKP-215ENST00000600910 SLC16A10Q8TF71 515 aa25.78■■□□□ 1.72
PNKP-215ENST00000600910 MEIS3Q99687 375 aa25.78■■□□□ 1.72
PNKP-215ENST00000600910 COL24A1Q17RW2 1714 aa25.78■■□□□ 1.72
PNKP-215ENST00000600910 GRM8O00222 908 aa25.77■■□□□ 1.72
PNKP-215ENST00000600910 EXOC6Q8TAG9 804 aa25.77■■□□□ 1.72
PNKP-215ENST00000600910 CARMIL3Q8ND23 1372 aa25.77■■□□□ 1.72
PNKP-215ENST00000600910 PPP1R42Q7Z4L9 355 aa25.77■■□□□ 1.72
PNKP-215ENST00000600910 NBPF7P0C2Y1 421 aaPredicted RBP25.76■■□□□ 1.71
PNKP-215ENST00000600910 JARID2Q92833 1246 aaPredicted RBP25.76■■□□□ 1.71
PNKP-215ENST00000600910 UTP14AQ9BVJ6 771 aaKnown RBP25.76■■□□□ 1.71
PNKP-215ENST00000600910 TRMT112Q9UI30 125 aaKnown RBP25.76■■□□□ 1.71
PNKP-215ENST00000600910 RTL5Q5HYW3 569 aaPredicted RBP25.75■■□□□ 1.71
PNKP-215ENST00000600910 UTYO14607 1347 aa25.75■■□□□ 1.71
PNKP-215ENST00000600910 NTSR2O95665 410 aa25.74■■□□□ 1.71
PNKP-215ENST00000600910 DDR1Q08345 913 aa25.74■■□□□ 1.71
PNKP-215ENST00000600910 UBE3BQ7Z3V4 1068 aa25.74■■□□□ 1.71
PNKP-215ENST00000600910 ZBTB38Q8NAP3 1195 aaPredicted RBP25.74■■□□□ 1.71
PNKP-215ENST00000600910 FAM89AQ96GI7 184 aa25.74■■□□□ 1.71
PNKP-215ENST00000600910 H7C1W4 665 aa25.74■■□□□ 1.71
PNKP-215ENST00000600910 PCCAP05165 728 aaPredicted RBP25.74■■□□□ 1.71
PNKP-215ENST00000600910 NBPF5PQ86XG9 351 aaPredicted RBP25.74■■□□□ 1.71
PNKP-215ENST00000600910 CHMP4BQ9H444 224 aaKnown RBP25.74■■□□□ 1.71
PNKP-215ENST00000600910 POLRMTO00411 1230 aaKnown RBP25.73■■□□□ 1.71
PNKP-215ENST00000600910 ZBTB7AO95365 584 aa25.73■■□□□ 1.71
PNKP-215ENST00000600910 GNAI3P08754 354 aa25.73■■□□□ 1.71
PNKP-215ENST00000600910 MMP10P09238 476 aa25.73■■□□□ 1.71
PNKP-215ENST00000600910 UBTFL1P0CB47 393 aaPredicted RBP25.73■■□□□ 1.71
PNKP-215ENST00000600910 ZBTB40Q9NUA8 1239 aa25.73■■□□□ 1.71
PNKP-215ENST00000600910 CASP7P55210 303 aa25.72■■□□□ 1.71
PNKP-215ENST00000600910 SYNE4Q8N205 404 aa25.72■■□□□ 1.71
PNKP-215ENST00000600910 NYXQ9GZU5 481 aa25.72■■□□□ 1.71
PNKP-215ENST00000600910 SERPINB2P05120 415 aa25.71■■□□□ 1.71
PNKP-215ENST00000600910 NUTM1Q86Y26 1132 aa25.71■■□□□ 1.71
PNKP-215ENST00000600910 SH3TC1Q8TE82 1336 aa25.71■■□□□ 1.71
PNKP-215ENST00000600910 TPTE2Q6XPS3 522 aa25.7■■□□□ 1.71
PNKP-215ENST00000600910 MTFR1LQ9H019 292 aa25.7■■□□□ 1.71
PNKP-215ENST00000600910 PARP3Q9Y6F1 533 aa25.7■■□□□ 1.7
PNKP-215ENST00000600910 NPHP1O15259 732 aa25.69■■□□□ 1.7
PNKP-215ENST00000600910 GTF2E1P29083 439 aaPredicted RBP25.69■■□□□ 1.7
PNKP-215ENST00000600910 C1orf115Q9H7X2 142 aa25.69■■□□□ 1.7
PNKP-215ENST00000600910 CDHR2Q9BYE9 1310 aa25.69■■□□□ 1.7
PNKP-215ENST00000600910 ERFEQ4G0M1 354 aa25.68■■□□□ 1.7
PNKP-215ENST00000600910 CNBD1Q8NA66 436 aa25.68■■□□□ 1.7
PNKP-215ENST00000600910 SUCLG2Q96I99 432 aa25.68■■□□□ 1.7
PNKP-215ENST00000600910 IRS4O14654 1257 aaPredicted RBP25.67■■□□□ 1.7
PNKP-215ENST00000600910 GNAI2P04899 355 aa25.67■■□□□ 1.7
PNKP-215ENST00000600910 PRR5LQ6MZQ0 368 aa25.67■■□□□ 1.7
PNKP-215ENST00000600910 ATF5Q9Y2D1 282 aaPredicted RBP25.67■■□□□ 1.7
PNKP-215ENST00000600910 LRRFIP2Q9Y608 721 aaKnown RBP25.67■■□□□ 1.7
PNKP-215ENST00000600910 NRXN2Q9P2S2 1712 aa25.66■■□□□ 1.7
PNKP-215ENST00000600910 CCDC24Q8N4L8 307 aa25.66■■□□□ 1.7
PNKP-215ENST00000600910 KAZALD1Q96I82 304 aa25.66■■□□□ 1.7
PNKP-215ENST00000600910 HDAC5Q9UQL6 1122 aa25.66■■□□□ 1.7
PNKP-215ENST00000600910 ABCC12Q96J65 1359 aa25.65■■□□□ 1.7
PNKP-215ENST00000600910 HCLS1P14317 486 aaPredicted RBP25.65■■□□□ 1.7
PNKP-215ENST00000600910 AAMPQ13685 434 aa25.65■■□□□ 1.7
PNKP-215ENST00000600910 DDX60Q8IY21 1712 aaKnown RBP25.64■■□□□ 1.69
PNKP-215ENST00000600910 ST5P78524 1137 aa25.63■■□□□ 1.69
PNKP-215ENST00000600910 EPHA10Q5JZY3 1008 aa25.63■■□□□ 1.69
PNKP-215ENST00000600910 BICC1Q9H694 974 aaKnown RBP25.63■■□□□ 1.69
PNKP-215ENST00000600910 LAMB2P55268 1798 aa25.63■■□□□ 1.69
PNKP-215ENST00000600910 SLC10A5Q5PT55 438 aa25.63■■□□□ 1.69
PNKP-215ENST00000600910 PLA2G12BQ9BX93 195 aa25.63■■□□□ 1.69
PNKP-215ENST00000600910 PDE8AO60658 829 aa25.62■■□□□ 1.69
PNKP-215ENST00000600910 FOXO4P98177 505 aa25.62■■□□□ 1.69
PNKP-215ENST00000600910 HSP90B1P14625 803 aaKnown RBP25.61■■□□□ 1.69
PNKP-215ENST00000600910 POLD1P28340 1107 aa25.61■■□□□ 1.69
PNKP-215ENST00000600910 ANKRD44Q8N8A2 993 aa25.59■■□□□ 1.69
PNKP-215ENST00000600910 PCDHB15Q9Y5E8 787 aa25.59■■□□□ 1.69
PNKP-215ENST00000600910 CTSWP56202 376 aa25.59■■□□□ 1.69
PNKP-215ENST00000600910 RABL6Q3YEC7 729 aaPredicted RBP25.59■■□□□ 1.69
PNKP-215ENST00000600910 CEP85Q6P2H3 762 aa25.59■■□□□ 1.69
PNKP-215ENST00000600910 SGIP1Q9BQI5 828 aa25.59■■□□□ 1.69
PNKP-215ENST00000600910 MYH3P11055 1940 aa25.58■■□□□ 1.69
PNKP-215ENST00000600910 TNRC6CQ9HCJ0 1690 aaKnown RBP25.58■■□□□ 1.69
PNKP-215ENST00000600910 ERICH6BQ5W0A0 696 aa25.58■■□□□ 1.69
PNKP-215ENST00000600910 LMBR1LQ6UX01 489 aa25.58■■□□□ 1.69
PNKP-215ENST00000600910 RIC1Q4ADV7 1423 aa25.57■■□□□ 1.68
PNKP-215ENST00000600910 PTGER2P43116 358 aa25.57■■□□□ 1.68
PNKP-215ENST00000600910 C3orf67Q6ZVT6 689 aa25.57■■□□□ 1.68
PNKP-215ENST00000600910 NLRP3Q96P20 1036 aa25.57■■□□□ 1.68
PNKP-215ENST00000600910 TTLL11Q8NHH1 800 aa25.56■■□□□ 1.68
PNKP-215ENST00000600910 CSF1RP07333 972 aa25.55■■□□□ 1.68
PNKP-215ENST00000600910 RPAP2Q8IXW5 612 aaPredicted RBP25.55■■□□□ 1.68
PNKP-215ENST00000600910 CCDC85AQ96PX6 553 aaPredicted RBP25.55■■□□□ 1.68
PNKP-215ENST00000600910 BRIP1Q9BX63 1249 aa25.55■■□□□ 1.68
PNKP-215ENST00000600910 SPON1Q9HCB6 807 aa25.55■■□□□ 1.68
PNKP-215ENST00000600910 CHMP3Q9Y3E7 222 aa25.55■■□□□ 1.68
PNKP-215ENST00000600910 ANKRD31Q8N7Z5 1873 aa25.55■■□□□ 1.68
PNKP-215ENST00000600910 ATP8B2P98198 1209 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms