RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 C9orf131Q5VYM1 1079 aa17.35■□□□□ 0.37
ARHGEF1-222ENST00000600517 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
ARHGEF1-222ENST00000600517 C7orf43Q8WVR3 580 aa17.35■□□□□ 0.37
ARHGEF1-222ENST00000600517 MYH16Q9H6N6 1097 aa17.35■□□□□ 0.37
ARHGEF1-222ENST00000600517 RIC1Q4ADV7 1423 aa17.35■□□□□ 0.37
ARHGEF1-222ENST00000600517 VAMP4O75379 141 aa17.34■□□□□ 0.37
ARHGEF1-222ENST00000600517 HOXA10P31260 410 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF1-222ENST00000600517 EXOSC9Q06265 439 aaKnown RBP17.34■□□□□ 0.37
ARHGEF1-222ENST00000600517 DIEXFQ68CQ4 756 aaKnown RBP17.34■□□□□ 0.37
ARHGEF1-222ENST00000600517 RIC3Q7Z5B4 369 aa17.34■□□□□ 0.37
ARHGEF1-222ENST00000600517 STK31Q9BXU1 1019 aa17.34■□□□□ 0.37
ARHGEF1-222ENST00000600517 ZNF219Q9P2Y4 722 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF1-222ENST00000600517 NLRP3Q96P20 1036 aa17.33■□□□□ 0.36
ARHGEF1-222ENST00000600517 TRMT112Q9UI30 125 aaKnown RBP17.33■□□□□ 0.36
ARHGEF1-222ENST00000600517 COL11A2P13942 1736 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF1-222ENST00000600517 ATP5J2-PTCD1G3V325 749 aa17.32■□□□□ 0.36
ARHGEF1-222ENST00000600517 NFKBIEO00221 500 aa17.32■□□□□ 0.36
ARHGEF1-222ENST00000600517 TCERG1O14776 1098 aaKnown RBP17.32■□□□□ 0.36
ARHGEF1-222ENST00000600517 DDX58O95786 925 aaKnown RBP17.32■□□□□ 0.36
ARHGEF1-222ENST00000600517 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
ARHGEF1-222ENST00000600517 SOGA3Q5TF21 947 aa17.32■□□□□ 0.36
ARHGEF1-222ENST00000600517 SYNE4Q8N205 404 aa17.32■□□□□ 0.36
ARHGEF1-222ENST00000600517 SH3TC1Q8TE82 1336 aa17.31■□□□□ 0.36
ARHGEF1-222ENST00000600517 LMNB1P20700 586 aa17.31■□□□□ 0.36
ARHGEF1-222ENST00000600517 PRELPP51888 382 aa17.31■□□□□ 0.36
ARHGEF1-222ENST00000600517 RASSF7Q02833 373 aa17.31■□□□□ 0.36
ARHGEF1-222ENST00000600517 C3orf67Q6ZVT6 689 aa17.31■□□□□ 0.36
ARHGEF1-222ENST00000600517 RPGRQ92834 1020 aaKnown RBP17.31■□□□□ 0.36
ARHGEF1-222ENST00000600517 CRAMP1Q96RY5 1269 aa17.31■□□□□ 0.36
ARHGEF1-222ENST00000600517 RNF181Q9P0P0 153 aa17.31■□□□□ 0.36
ARHGEF1-222ENST00000600517 KSR2Q6VAB6 950 aa17.3■□□□□ 0.36
ARHGEF1-222ENST00000600517 RBM17Q96I25 401 aaKnown RBP17.3■□□□□ 0.36
ARHGEF1-222ENST00000600517 METTL22Q9BUU2 404 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF1-222ENST00000600517 LTBP3Q9NS15 1303 aa17.29■□□□□ 0.36
ARHGEF1-222ENST00000600517 HCLS1P14317 486 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF1-222ENST00000600517 G2E3Q7L622 706 aa17.29■□□□□ 0.36
ARHGEF1-222ENST00000600517 MIER1Q8N108 512 aa17.29■□□□□ 0.36
ARHGEF1-222ENST00000600517 FAM89AQ96GI7 184 aa17.29■□□□□ 0.36
ARHGEF1-222ENST00000600517 GPBP1L1Q9HC44 474 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF1-222ENST00000600517 PI4KAP2A4QPH2 592 aa17.28■□□□□ 0.36
ARHGEF1-222ENST00000600517 CCDC93Q567U6 631 aa17.28■□□□□ 0.36
ARHGEF1-222ENST00000600517 PI4KAP1Q8N8J0 262 aa17.28■□□□□ 0.36
ARHGEF1-222ENST00000600517 CCDC191Q8NCU4 936 aa17.28■□□□□ 0.36
ARHGEF1-222ENST00000600517 MYD88Q99836 296 aa17.28■□□□□ 0.36
ARHGEF1-222ENST00000600517 MAP3K2Q9Y2U5 619 aa17.28■□□□□ 0.36
ARHGEF1-222ENST00000600517 TNRC6CQ9HCJ0 1690 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-222ENST00000600517 SLX4Q8IY92 1834 aa17.28■□□□□ 0.36
ARHGEF1-222ENST00000600517 E9PSI1 815 aa17.27■□□□□ 0.36
ARHGEF1-222ENST00000600517 CC2D2BQ6DHV5 1058 aa17.27■□□□□ 0.36
ARHGEF1-222ENST00000600517 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.36
ARHGEF1-222ENST00000600517 ZNF526Q8TF50 670 aaPredicted RBP17.27■□□□□ 0.36
ARHGEF1-222ENST00000600517 ZNF428Q96B54 188 aa17.27■□□□□ 0.36
ARHGEF1-222ENST00000600517 TAOK3Q9H2K8 898 aa17.27■□□□□ 0.36
ARHGEF1-222ENST00000600517 ANKRD36CQ5JPF3 1778 aa17.27■□□□□ 0.35
ARHGEF1-222ENST00000600517 FLIIQ13045 1269 aa17.26■□□□□ 0.35
ARHGEF1-222ENST00000600517 OLFM4Q6UX06 510 aa17.26■□□□□ 0.35
ARHGEF1-222ENST00000600517 ZBTB38Q8NAP3 1195 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF1-222ENST00000600517 ZC3H4Q9UPT8 1303 aaKnown RBP17.25■□□□□ 0.35
ARHGEF1-222ENST00000600517 SLFN5Q08AF3 891 aa17.25■□□□□ 0.35
ARHGEF1-222ENST00000600517 SF3B3Q15393 1217 aaKnown RBP17.25■□□□□ 0.35
ARHGEF1-222ENST00000600517 CWC25Q9NXE8 425 aaPredicted RBP17.25■□□□□ 0.35
ARHGEF1-222ENST00000600517 IRS4O14654 1257 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF1-222ENST00000600517 BBOX1O75936 387 aa17.24■□□□□ 0.35
ARHGEF1-222ENST00000600517 PCCAP05165 728 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF1-222ENST00000600517 IGKV5-2P06315 115 aa17.24■□□□□ 0.35
ARHGEF1-222ENST00000600517 FKBP4Q02790 459 aaKnown RBP eCLIP17.24■□□□□ 0.35
ARHGEF1-222ENST00000600517 NEXNQ0ZGT2 675 aa17.24■□□□□ 0.35
ARHGEF1-222ENST00000600517 GRIPAP1Q4V328 841 aa17.24■□□□□ 0.35
ARHGEF1-222ENST00000600517 ARFGEF2Q9Y6D5 1785 aa17.23■□□□□ 0.35
ARHGEF1-222ENST00000600517 PPEF1O14829 653 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF1-222ENST00000600517 HSP90B1P14625 803 aaKnown RBP17.23■□□□□ 0.35
ARHGEF1-222ENST00000600517 RTL5Q5HYW3 569 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF1-222ENST00000600517 DDX46Q7L014 1031 aaKnown RBP17.23■□□□□ 0.35
ARHGEF1-222ENST00000600517 TRMT2AQ8IZ69 625 aaKnown RBP17.23■□□□□ 0.35
ARHGEF1-222ENST00000600517 ABCC4O15439 1325 aa17.22■□□□□ 0.35
ARHGEF1-222ENST00000600517 FKBP5Q13451 457 aaPredicted RBP17.22■□□□□ 0.35
ARHGEF1-222ENST00000600517 CDCA7LQ96GN5 454 aa17.22■□□□□ 0.35
ARHGEF1-222ENST00000600517 PSMD1Q99460 953 aa17.22■□□□□ 0.35
ARHGEF1-222ENST00000600517 ATP6V0A2Q9Y487 856 aa17.22■□□□□ 0.35
ARHGEF1-222ENST00000600517 SBF1O95248 1867 aa17.22■□□□□ 0.35
ARHGEF1-222ENST00000600517 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
ARHGEF1-222ENST00000600517 SNED1Q8TER0 1413 aa17.21■□□□□ 0.35
ARHGEF1-222ENST00000600517 FER1L6Q2WGJ9 1857 aa17.21■□□□□ 0.35
ARHGEF1-222ENST00000600517 KIF3CO14782 793 aa17.21■□□□□ 0.35
ARHGEF1-222ENST00000600517 GRAPQ13588 217 aa17.21■□□□□ 0.35
ARHGEF1-222ENST00000600517 SP8Q8IXZ3 490 aa17.21■□□□□ 0.35
ARHGEF1-222ENST00000600517 GRAPLQ8TC17 118 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF1-222ENST00000600517 DNAAF4Q8WXU2 420 aa17.21■□□□□ 0.35
ARHGEF1-222ENST00000600517 GLTPD2A6NH11 291 aa17.2■□□□□ 0.34
ARHGEF1-222ENST00000600517 NEURL1BA8MQ27 555 aa17.2■□□□□ 0.34
ARHGEF1-222ENST00000600517 C1QTNF8P60827 252 aa17.2■□□□□ 0.34
ARHGEF1-222ENST00000600517 CWF19L2Q2TBE0 894 aaKnown RBP17.2■□□□□ 0.34
ARHGEF1-222ENST00000600517 JARID2Q92833 1246 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF1-222ENST00000600517 TMX4Q9H1E5 349 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF1-222ENST00000600517 NMRK2Q9NPI5 230 aa17.2■□□□□ 0.34
ARHGEF1-222ENST00000600517 ZNF277Q9NRM2 450 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF1-222ENST00000600517 H7C1W4 665 aa17.19■□□□□ 0.34
ARHGEF1-222ENST00000600517 TMC4Q7Z404 712 aa17.19■□□□□ 0.34
ARHGEF1-222ENST00000600517 LINS1Q8NG48 757 aa17.19■□□□□ 0.34
ARHGEF1-222ENST00000600517 CDHR2Q9BYE9 1310 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms