RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 TNMDQ9H2S6 317 aa17.34■□□□□ 0.37
SYMPK-213ENST00000599460 IQSEC3Q9UPP2 1182 aaPredicted RBP17.34■□□□□ 0.37
SYMPK-213ENST00000599460 ABCA9Q8IUA7 1624 aa17.34■□□□□ 0.37
SYMPK-213ENST00000599460 ZBTB7BO15156 539 aaPredicted RBP17.34■□□□□ 0.37
SYMPK-213ENST00000599460 PLBD2Q8NHP8 589 aa17.34■□□□□ 0.37
SYMPK-213ENST00000599460 FAM13BQ9NYF5 915 aa17.34■□□□□ 0.37
SYMPK-213ENST00000599460 CLTCL1P53675 1640 aa17.33■□□□□ 0.37
SYMPK-213ENST00000599460 IFIT3O14879 490 aaKnown RBP17.33■□□□□ 0.37
SYMPK-213ENST00000599460 ARID3AQ99856 593 aa17.33■□□□□ 0.37
SYMPK-213ENST00000599460 GNPATO15228 680 aa17.33■□□□□ 0.36
SYMPK-213ENST00000599460 PRIM1P49642 420 aaKnown RBP17.33■□□□□ 0.36
SYMPK-213ENST00000599460 TBC1D2Q9BYX2 928 aa17.33■□□□□ 0.36
SYMPK-213ENST00000599460 ANO8Q9HCE9 1232 aaPredicted RBP17.32■□□□□ 0.36
SYMPK-213ENST00000599460 USP19O94966 1318 aa17.32■□□□□ 0.36
SYMPK-213ENST00000599460 CCDC196A0A1B0GTZ2 297 aa17.32■□□□□ 0.36
SYMPK-213ENST00000599460 BAG3O95817 575 aa17.32■□□□□ 0.36
SYMPK-213ENST00000599460 CCAR2Q8N163 923 aaKnown RBP17.32■□□□□ 0.36
SYMPK-213ENST00000599460 UNC13BO14795 1591 aa17.32■□□□□ 0.36
SYMPK-213ENST00000599460 INSRP06213 1382 aa17.32■□□□□ 0.36
SYMPK-213ENST00000599460 EPS15P42566 896 aa17.32■□□□□ 0.36
SYMPK-213ENST00000599460 TRIM5Q9C035 493 aa17.32■□□□□ 0.36
SYMPK-213ENST00000599460 CTCFLQ8NI51 663 aaPredicted RBP17.32■□□□□ 0.36
SYMPK-213ENST00000599460 METTL22Q9BUU2 404 aaPredicted RBP17.32■□□□□ 0.36
SYMPK-213ENST00000599460 TFCP2Q12800 502 aa17.31■□□□□ 0.36
SYMPK-213ENST00000599460 CCDC82Q8N4S0 544 aa17.31■□□□□ 0.36
SYMPK-213ENST00000599460 CROCC2H7BZ55 1655 aa17.31■□□□□ 0.36
SYMPK-213ENST00000599460 MCM4P33991 863 aa17.31■□□□□ 0.36
SYMPK-213ENST00000599460 SEC63Q9UGP8 760 aaKnown RBP17.31■□□□□ 0.36
SYMPK-213ENST00000599460 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
SYMPK-213ENST00000599460 GOLGA8BA8MQT2 603 aa17.31■□□□□ 0.36
SYMPK-213ENST00000599460 HOMER1Q86YM7 354 aa17.31■□□□□ 0.36
SYMPK-213ENST00000599460 PDILTQ8N807 584 aa17.31■□□□□ 0.36
SYMPK-213ENST00000599460 CCT2P78371 535 aaKnown RBP17.31■□□□□ 0.36
SYMPK-213ENST00000599460 USP21Q9UK80 565 aa17.31■□□□□ 0.36
SYMPK-213ENST00000599460 PRR36Q9H6K5 1346 aa17.31■□□□□ 0.36
SYMPK-213ENST00000599460 A1BGP04217 495 aa17.3■□□□□ 0.36
SYMPK-213ENST00000599460 NEK1Q96PY6 1258 aa17.3■□□□□ 0.36
SYMPK-213ENST00000599460 AATKQ6ZMQ8 1374 aa17.3■□□□□ 0.36
SYMPK-213ENST00000599460 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
SYMPK-213ENST00000599460 TRAPPC3LQ5T215 181 aa17.3■□□□□ 0.36
SYMPK-213ENST00000599460 TBC1D32Q96NH3 1257 aa17.3■□□□□ 0.36
SYMPK-213ENST00000599460 HMG20BQ9P0W2 317 aa17.3■□□□□ 0.36
SYMPK-213ENST00000599460 USP6P35125 1406 aa17.3■□□□□ 0.36
SYMPK-213ENST00000599460 ZFYP08048 801 aaPredicted RBP17.3■□□□□ 0.36
SYMPK-213ENST00000599460 CCDC192P0DO97 292 aa17.3■□□□□ 0.36
SYMPK-213ENST00000599460 SLC4A8Q2Y0W8 1093 aa17.3■□□□□ 0.36
SYMPK-213ENST00000599460 HELBQ8NG08 1087 aaPredicted RBP17.3■□□□□ 0.36
SYMPK-213ENST00000599460 MAP3K4Q9Y6R4 1608 aa17.3■□□□□ 0.36
SYMPK-213ENST00000599460 GOLGA8AA7E2F4 631 aa17.3■□□□□ 0.36
SYMPK-213ENST00000599460 SMC2O95347 1197 aa17.3■□□□□ 0.36
SYMPK-213ENST00000599460 FAM89AQ96GI7 184 aa17.3■□□□□ 0.36
SYMPK-213ENST00000599460 ZNF496Q96IT1 587 aaPredicted RBP17.29■□□□□ 0.36
SYMPK-213ENST00000599460 ESYT1Q9BSJ8 1104 aa17.29■□□□□ 0.36
SYMPK-213ENST00000599460 A2ML1A8K2U0 1454 aa17.29■□□□□ 0.36
SYMPK-213ENST00000599460 MFSD6Q6ZSS7 791 aa17.29■□□□□ 0.36
SYMPK-213ENST00000599460 TTC41PQ6P2S7 1318 aa17.29■□□□□ 0.36
SYMPK-213ENST00000599460 CYP7A1P22680 504 aa17.29■□□□□ 0.36
SYMPK-213ENST00000599460 C8orf76Q96K31 380 aa17.29■□□□□ 0.36
SYMPK-213ENST00000599460 GSTO1P78417 241 aa17.28■□□□□ 0.36
SYMPK-213ENST00000599460 HSP90AA2PQ14568 343 aaPredicted RBP17.28■□□□□ 0.36
SYMPK-213ENST00000599460 IL17REQ8NFR9 667 aa17.28■□□□□ 0.36
SYMPK-213ENST00000599460 NCOA7Q8NI08 942 aa17.28■□□□□ 0.36
SYMPK-213ENST00000599460 PAG1Q9NWQ8 432 aa17.28■□□□□ 0.36
SYMPK-213ENST00000599460 PHKG2P15735 406 aa17.28■□□□□ 0.36
SYMPK-213ENST00000599460 GUCY1B3Q02153 619 aa17.28■□□□□ 0.36
SYMPK-213ENST00000599460 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
SYMPK-213ENST00000599460 CATIPQ7Z7H3 387 aa17.28■□□□□ 0.36
SYMPK-213ENST00000599460 SMC5Q8IY18 1101 aa17.28■□□□□ 0.36
SYMPK-213ENST00000599460 CRNKL1Q9BZJ0 848 aaKnown RBP17.28■□□□□ 0.36
SYMPK-213ENST00000599460 ZNF76P36508 570 aa17.28■□□□□ 0.36
SYMPK-213ENST00000599460 TMEM67Q5HYA8 995 aa17.28■□□□□ 0.36
SYMPK-213ENST00000599460 RNF17Q9BXT8 1623 aaKnown RBP17.27■□□□□ 0.36
SYMPK-213ENST00000599460 PDE4BQ07343 736 aa17.27■□□□□ 0.36
SYMPK-213ENST00000599460 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.36
SYMPK-213ENST00000599460 SLC9C2Q5TAH2 1124 aa17.27■□□□□ 0.36
SYMPK-213ENST00000599460 PARP3Q9Y6F1 533 aa17.27■□□□□ 0.36
SYMPK-213ENST00000599460 ERVV-2B6SEH9 535 aa17.27■□□□□ 0.36
SYMPK-213ENST00000599460 HMGN5P82970 282 aaKnown RBP17.27■□□□□ 0.36
SYMPK-213ENST00000599460 SSRP1Q08945 709 aaKnown RBP17.27■□□□□ 0.36
SYMPK-213ENST00000599460 DNAJC10Q8IXB1 793 aa17.27■□□□□ 0.36
SYMPK-213ENST00000599460 MAGEC2Q9UBF1 373 aaPredicted RBP17.27■□□□□ 0.36
SYMPK-213ENST00000599460 CCDC96Q2M329 555 aa17.27■□□□□ 0.35
SYMPK-213ENST00000599460 ZHX3Q9H4I2 956 aa17.26■□□□□ 0.35
SYMPK-213ENST00000599460 CEP131Q9UPN4 1083 aa17.26■□□□□ 0.35
SYMPK-213ENST00000599460 NMIQ13287 307 aaPredicted RBP17.26■□□□□ 0.35
SYMPK-213ENST00000599460 CCDC144CPQ8IYA2 1237 aa17.26■□□□□ 0.35
SYMPK-213ENST00000599460 CCDC39Q9UFE4 941 aa17.26■□□□□ 0.35
SYMPK-213ENST00000599460 TSPY2A6NKD2 308 aa17.26■□□□□ 0.35
SYMPK-213ENST00000599460 PLEKHM2Q8IWE5 1019 aa17.26■□□□□ 0.35
SYMPK-213ENST00000599460 CCDC191Q8NCU4 936 aa17.26■□□□□ 0.35
SYMPK-213ENST00000599460 PLEKHF1Q96S99 279 aa17.26■□□□□ 0.35
SYMPK-213ENST00000599460 SLC4A4Q9Y6R1 1079 aa17.26■□□□□ 0.35
SYMPK-213ENST00000599460 KIAA0232Q92628 1395 aa17.26■□□□□ 0.35
SYMPK-213ENST00000599460 FILIP1LQ4L180 1135 aa17.26■□□□□ 0.35
SYMPK-213ENST00000599460 ZGPATQ8N5A5 531 aaKnown RBP17.26■□□□□ 0.35
SYMPK-213ENST00000599460 NUP62CLQ9H1M0 184 aa17.26■□□□□ 0.35
SYMPK-213ENST00000599460 A0A0U1RQG5 324 aaPredicted RBP17.25■□□□□ 0.35
SYMPK-213ENST00000599460 KCNQ3O43525 872 aa17.25■□□□□ 0.35
SYMPK-213ENST00000599460 ZNF804AQ7Z570 1209 aa17.25■□□□□ 0.35
SYMPK-213ENST00000599460 CCDC87Q9NVE4 849 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms